RNA–Protein interactions for RNA: ENST00000517553.1

TRAPPC2-205, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-205ENST00000517553 PRSS12P56730 875 aa6.33□□□□□ -1.4
TRAPPC2-205ENST00000517553 EN1Q05925 392 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC2-205ENST00000517553 LMOD2Q6P5Q4 547 aa6.33□□□□□ -1.4
TRAPPC2-205ENST00000517553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC2-205ENST00000517553 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
TRAPPC2-205ENST00000517553 PKDCCQ504Y2 493 aa6.31□□□□□ -1.4
TRAPPC2-205ENST00000517553 TRIM67Q6ZTA4 783 aa6.31□□□□□ -1.4
TRAPPC2-205ENST00000517553 NUDT18Q6ZVK8 323 aa6.31□□□□□ -1.4
TRAPPC2-205ENST00000517553 GGCXP38435 758 aa6.3□□□□□ -1.4
TRAPPC2-205ENST00000517553 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
TRAPPC2-205ENST00000517553 GRXCR2A6NFK2 248 aa6.29□□□□□ -1.4
TRAPPC2-205ENST00000517553 SLC19A1P41440 591 aa6.29□□□□□ -1.4
TRAPPC2-205ENST00000517553 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
TRAPPC2-205ENST00000517553 PPEF1O14829 653 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC2-205ENST00000517553 NBPF26B4DH59 902 aa6.27□□□□□ -1.41
TRAPPC2-205ENST00000517553 ZPR1O75312 459 aa6.27□□□□□ -1.41
TRAPPC2-205ENST00000517553 DGAT1O75907 488 aa6.27□□□□□ -1.41
TRAPPC2-205ENST00000517553 SWT1Q5T5J6 900 aaKnown RBP6.27□□□□□ -1.41
TRAPPC2-205ENST00000517553 EMID1Q96A84 441 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC2-205ENST00000517553 RNF223E7ERA6 249 aa6.26□□□□□ -1.41
TRAPPC2-205ENST00000517553 TMUB1Q9BVT8 246 aa6.26□□□□□ -1.41
TRAPPC2-205ENST00000517553 FAM187AA6NFU0 413 aa6.25□□□□□ -1.41
TRAPPC2-205ENST00000517553 TNFRSF10AO00220 468 aa6.25□□□□□ -1.41
TRAPPC2-205ENST00000517553 ST8SIA5O15466 376 aa6.25□□□□□ -1.41
TRAPPC2-205ENST00000517553 PRKCSHP14314 528 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC2-205ENST00000517553 CDHR5Q9HBB8 845 aa6.25□□□□□ -1.41
TRAPPC2-205ENST00000517553 MLLT3P42568 568 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC2-205ENST00000517553 SPRYD7Q5W111 196 aa6.24□□□□□ -1.41
TRAPPC2-205ENST00000517553 GPIHBP1Q8IV16 184 aa6.24□□□□□ -1.41
TRAPPC2-205ENST00000517553 CERKQ8TCT0 537 aa6.23□□□□□ -1.41
TRAPPC2-205ENST00000517553 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
TRAPPC2-205ENST00000517553 TLL1O43897 1013 aa6.22□□□□□ -1.41
TRAPPC2-205ENST00000517553 LIAT1Q6ZQX7 453 aa6.22□□□□□ -1.41
TRAPPC2-205ENST00000517553 ZNF598Q86UK7 904 aaKnown RBP6.22□□□□□ -1.41
TRAPPC2-205ENST00000517553 ZC3H15Q8WU90 426 aaKnown RBP6.22□□□□□ -1.41
TRAPPC2-205ENST00000517553 PCDHB3Q9Y5E6 796 aa6.22□□□□□ -1.41
TRAPPC2-205ENST00000517553 ZNF697Q5TEC3 545 aa6.21□□□□□ -1.42
TRAPPC2-205ENST00000517553 BLOC1S3Q6QNY0 202 aa6.21□□□□□ -1.42
TRAPPC2-205ENST00000517553 SLF2Q8IX21 1173 aa6.21□□□□□ -1.42
TRAPPC2-205ENST00000517553 AAASQ9NRG9 546 aa6.21□□□□□ -1.42
TRAPPC2-205ENST00000517553 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 ZMYND10O75800 440 aa6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 S1PR4O95977 384 aa6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 OSBPP22059 807 aa6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 RBM26Q5T8P6 1007 aaKnown RBP6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 PADI6Q6TGC4 694 aa6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 DACH1Q9UI36 760 aa6.19□□□□□ -1.42
TRAPPC2-205ENST00000517553 GDF9O60383 454 aa6.18□□□□□ -1.42
TRAPPC2-205ENST00000517553 FOXC1Q12948 553 aa6.18□□□□□ -1.42
TRAPPC2-205ENST00000517553 BARGINQ6ZT62 677 aa6.18□□□□□ -1.42
TRAPPC2-205ENST00000517553 PRR20EP86478 221 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 PRR20CP86479 221 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 PRR20DP86480 221 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 PRR20BP86481 221 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 PRR20AP86496 221 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 HIC1Q14526 733 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 XP32Q5T750 250 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 NECTIN2Q92692 538 aa6.17□□□□□ -1.42
TRAPPC2-205ENST00000517553 FCHSD2O94868 740 aa6.16□□□□□ -1.42
TRAPPC2-205ENST00000517553 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC2-205ENST00000517553 SLC4A3P48751 1232 aa6.16□□□□□ -1.42
TRAPPC2-205ENST00000517553 ANKLE1Q8NAG6 615 aa6.16□□□□□ -1.42
TRAPPC2-205ENST00000517553 NPDC1Q9NQX5 325 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC2-205ENST00000517553 NUTM2FA1L443 756 aa6.15□□□□□ -1.42
TRAPPC2-205ENST00000517553 FAM181BA6NEQ2 426 aa6.15□□□□□ -1.42
TRAPPC2-205ENST00000517553 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
TRAPPC2-205ENST00000517553 GMPR2Q9P2T1 348 aaKnown RBP6.15□□□□□ -1.42
TRAPPC2-205ENST00000517553 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
TRAPPC2-205ENST00000517553 GNPATO15228 680 aa6.14□□□□□ -1.43
TRAPPC2-205ENST00000517553 GPR37O15354 613 aa6.14□□□□□ -1.43
TRAPPC2-205ENST00000517553 PLA2G2CQ5R387 149 aa6.14□□□□□ -1.43
TRAPPC2-205ENST00000517553 EYA1Q99502 592 aa6.14□□□□□ -1.43
TRAPPC2-205ENST00000517553 C11orf95C9JLR9 678 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC2-205ENST00000517553 MAP2K5Q13163 448 aa6.13□□□□□ -1.43
TRAPPC2-205ENST00000517553 PTGDRQ13258 359 aa6.13□□□□□ -1.43
TRAPPC2-205ENST00000517553 TTC13Q8NBP0 860 aa6.13□□□□□ -1.43
TRAPPC2-205ENST00000517553 PRR14Q9BWN1 585 aa6.13□□□□□ -1.43
TRAPPC2-205ENST00000517553 MINK1Q8N4C8 1332 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC2-205ENST00000517553 KCTD17Q8N5Z5 321 aa6.12□□□□□ -1.43
TRAPPC2-205ENST00000517553 KRI1Q8N9T8 703 aaKnown RBP6.12□□□□□ -1.43
TRAPPC2-205ENST00000517553 AK7Q96M32 723 aa6.12□□□□□ -1.43
TRAPPC2-205ENST00000517553 RBM27Q9P2N5 1060 aaKnown RBP6.12□□□□□ -1.43
TRAPPC2-205ENST00000517553 DAXXQ9UER7 740 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC2-205ENST00000517553 SLC24A3Q9HC58 644 aa6.11□□□□□ -1.43
TRAPPC2-205ENST00000517553 PKD2L1Q9P0L9 805 aa6.11□□□□□ -1.43
TRAPPC2-205ENST00000517553 FAM161AQ3B820 660 aa6.1□□□□□ -1.43
TRAPPC2-205ENST00000517553 KRTAP1-3Q8IUG1 177 aa6.1□□□□□ -1.43
TRAPPC2-205ENST00000517553 SLC6A16Q9GZN6 736 aa6.1□□□□□ -1.43
TRAPPC2-205ENST00000517553 TERTO14746 1132 aaKnown RBP6.09□□□□□ -1.43
TRAPPC2-205ENST00000517553 AXIN1O15169 862 aa6.09□□□□□ -1.43
TRAPPC2-205ENST00000517553 ACTN4O43707 911 aaKnown RBP6.08□□□□□ -1.44
TRAPPC2-205ENST00000517553 CFHP08603 1231 aa6.08□□□□□ -1.44
TRAPPC2-205ENST00000517553 KMT5BQ4FZB7 885 aa6.08□□□□□ -1.44
TRAPPC2-205ENST00000517553 SCUBE3Q8IX30 993 aa6.08□□□□□ -1.44
TRAPPC2-205ENST00000517553 ADH1BP00325 375 aa6.07□□□□□ -1.44
TRAPPC2-205ENST00000517553 PUS10Q3MIT2 529 aaKnown RBP6.07□□□□□ -1.44
TRAPPC2-205ENST00000517553 ZSCAN1Q8NBB4 408 aa6.07□□□□□ -1.44
TRAPPC2-205ENST00000517553 IRF6O14896 467 aa6.06□□□□□ -1.44
TRAPPC2-205ENST00000517553 DNAJB2P25686 324 aa6.06□□□□□ -1.44
TRAPPC2-205ENST00000517553 CYP4X1Q8N118 509 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms