RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 TEX14Q8IWB6 1497 aa8.36□□□□□ -1.07
CPNE3-203ENST00000517490 U2AF1L5P0DN76 240 aaPredicted RBP8.36□□□□□ -1.07
CPNE3-203ENST00000517490 U2AF1Q01081 240 aaKnown RBP eCLIP8.36□□□□□ -1.07
CPNE3-203ENST00000517490 CAMSAP2Q08AD1 1489 aa8.36□□□□□ -1.07
CPNE3-203ENST00000517490 C20orf194Q5TEA3 1177 aa8.36□□□□□ -1.07
CPNE3-203ENST00000517490 PRG4Q92954 1404 aaPredicted RBP8.36□□□□□ -1.07
CPNE3-203ENST00000517490 SPATA31E1Q6ZUB1 1445 aa8.36□□□□□ -1.07
CPNE3-203ENST00000517490 SLFN5Q08AF3 891 aa8.36□□□□□ -1.07
CPNE3-203ENST00000517490 VSIG10Q8N0Z9 540 aa8.36□□□□□ -1.07
CPNE3-203ENST00000517490 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
CPNE3-203ENST00000517490 C22orf23Q9BZE7 217 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 DNTTIP2Q5QJE6 756 aaKnown RBP8.35□□□□□ -1.07
CPNE3-203ENST00000517490 EFCAB2Q5VUJ9 269 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 SKAP1Q86WV1 359 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 GCC2Q8IWJ2 1684 aa8.35□□□□□ -1.07
CPNE3-203ENST00000517490 TRAK2O60296 914 aa8.34□□□□□ -1.07
CPNE3-203ENST00000517490 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
CPNE3-203ENST00000517490 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
CPNE3-203ENST00000517490 BCAR3O75815 825 aa8.34□□□□□ -1.07
CPNE3-203ENST00000517490 RRP7AQ9Y3A4 280 aaKnown RBP8.34□□□□□ -1.07
CPNE3-203ENST00000517490 DUSP27Q5VZP5 1158 aa8.33□□□□□ -1.08
CPNE3-203ENST00000517490 DDX19BQ9UMR2 479 aa8.33□□□□□ -1.08
CPNE3-203ENST00000517490 CALD1Q05682 793 aaKnown RBP8.33□□□□□ -1.08
CPNE3-203ENST00000517490 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
CPNE3-203ENST00000517490 BCL2L13Q9BXK5 485 aa8.33□□□□□ -1.08
CPNE3-203ENST00000517490 POGKQ9P215 609 aa8.33□□□□□ -1.08
CPNE3-203ENST00000517490 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 SCAPERQ9BY12 1400 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 INSRP06213 1382 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 KIAA0586Q9BVV6 1533 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 MCM4P33991 863 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 C8orf34Q49A92 452 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 FBXO3Q9UK99 471 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
CPNE3-203ENST00000517490 NKTRP30414 1462 aaKnown RBP8.32□□□□□ -1.08
CPNE3-203ENST00000517490 UHRF1BP1Q6BDS2 1440 aa8.31□□□□□ -1.08
CPNE3-203ENST00000517490 ARHGEF12Q9NZN5 1544 aa8.31□□□□□ -1.08
CPNE3-203ENST00000517490 TPM2P07951 284 aa8.31□□□□□ -1.08
CPNE3-203ENST00000517490 DDX49Q9Y6V7 483 aaKnown RBP8.31□□□□□ -1.08
CPNE3-203ENST00000517490 KIF14Q15058 1648 aa8.3□□□□□ -1.08
CPNE3-203ENST00000517490 SAMD9Q5K651 1589 aa8.3□□□□□ -1.08
CPNE3-203ENST00000517490 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
CPNE3-203ENST00000517490 STAG3Q9UJ98 1225 aa8.3□□□□□ -1.08
CPNE3-203ENST00000517490 SPAG9O60271 1321 aaKnown RBP8.3□□□□□ -1.08
CPNE3-203ENST00000517490 PZPP20742 1482 aa8.3□□□□□ -1.08
CPNE3-203ENST00000517490 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-203ENST00000517490 FOXD4L1Q9NU39 408 aa8.29□□□□□ -1.08
CPNE3-203ENST00000517490 DNMT1P26358 1616 aaKnown RBP8.29□□□□□ -1.08
CPNE3-203ENST00000517490 PTPRGP23470 1445 aa8.29□□□□□ -1.08
CPNE3-203ENST00000517490 SYAP1Q96A49 352 aaPredicted RBP8.29□□□□□ -1.08
CPNE3-203ENST00000517490 GRPEL1Q9HAV7 217 aa8.29□□□□□ -1.08
CPNE3-203ENST00000517490 MCCP23508 829 aa8.29□□□□□ -1.08
CPNE3-203ENST00000517490 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
CPNE3-203ENST00000517490 KDM2BQ8NHM5 1336 aa8.28□□□□□ -1.08
CPNE3-203ENST00000517490 WDR63Q8IWG1 891 aa8.28□□□□□ -1.08
CPNE3-203ENST00000517490 TCP11L2Q8N4U5 519 aa8.28□□□□□ -1.08
CPNE3-203ENST00000517490 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
CPNE3-203ENST00000517490 KIAA2012Q0VF49 1180 aa8.28□□□□□ -1.08
CPNE3-203ENST00000517490 CIZ1Q9ULV3 898 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-203ENST00000517490 ST18O60284 1047 aa8.27□□□□□ -1.09
CPNE3-203ENST00000517490 CT47B1P0C2W7 299 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-203ENST00000517490 SRPK2P78362 688 aaKnown RBP8.27□□□□□ -1.09
CPNE3-203ENST00000517490 DISP3Q9P2K9 1392 aa8.27□□□□□ -1.09
CPNE3-203ENST00000517490 ESPNB1AK53 854 aa8.27□□□□□ -1.09
CPNE3-203ENST00000517490 CHAF1AQ13111 956 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-203ENST00000517490 GPATCH8Q9UKJ3 1502 aaKnown RBP8.27□□□□□ -1.09
CPNE3-203ENST00000517490 KIF16BQ96L93 1317 aa8.27□□□□□ -1.09
CPNE3-203ENST00000517490 NPM1P06748 294 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPNE3-203ENST00000517490 ANKRD45Q5TZF3 282 aa8.27□□□□□ -1.09
CPNE3-203ENST00000517490 SENP3Q9H4L4 574 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-203ENST00000517490 CCDC173Q0VFZ6 552 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 KIF3BO15066 747 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 PER1O15534 1290 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-203ENST00000517490 NASPP49321 788 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-203ENST00000517490 NUCB2P80303 420 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
CPNE3-203ENST00000517490 MVPQ14764 893 aaKnown RBP8.26□□□□□ -1.09
CPNE3-203ENST00000517490 WWC1Q8IX03 1113 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 MAP7D2Q96T17 732 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 ARHGEF11O15085 1522 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 KDM5BQ9UGL1 1544 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 SYNJ2O15056 1496 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 BLMP54132 1417 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-203ENST00000517490 PRAG1Q86YV5 1406 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-203ENST00000517490 TBC1D32Q96NH3 1257 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 CCDC141Q6ZP82 1450 aa8.26□□□□□ -1.09
CPNE3-203ENST00000517490 ITSN2Q9NZM3 1697 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 ZMYM4Q5VZL5 1548 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 IGHDP01880 384 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 TRAK1Q9UPV9 953 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 MAGI3Q5TCQ9 1506 aa8.25□□□□□ -1.09
CPNE3-203ENST00000517490 PHF14O94880 888 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms