RNA–Protein interactions for RNA: ENST00000516888.1

RN7SKP209-201, Transcript of RNA, 7SK small nuclear pseudogene 209, humanhuman

BASIC

Gene RN7SKP209, Length 304 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP209-201ENST00000516888 KDM6BO15054 1643 aa5.29□□□□□ -1.56
RN7SKP209-201ENST00000516888 TTC37Q6PGP7 1564 aa5.29□□□□□ -1.56
RN7SKP209-201ENST00000516888 POLR1AO95602 1720 aaPredicted RBP5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 ABCC1P33527 1531 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 ARID4BQ4LE39 1312 aaPredicted RBP5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 PZPP20742 1482 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 ABCA9Q8IUA7 1624 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 POTEB3A0JP26 581 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 ARID3CA6NKF2 412 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 EIF4G2P78344 907 aaKnown RBP eCLIP5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 POTEBQ6S5H4 581 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 STAC3Q96MF2 364 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 ZNF777Q9ULD5 760 aaPredicted RBP5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 PCDHB8Q9UN66 801 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 SYCP2Q9BX26 1530 aa5.28□□□□□ -1.56
RN7SKP209-201ENST00000516888 ZNF644Q9H582 1327 aaPredicted RBP5.27□□□□□ -1.57
RN7SKP209-201ENST00000516888 DENND4BO75064 1496 aaPredicted RBP5.27□□□□□ -1.57
RN7SKP209-201ENST00000516888 MAGI2Q86UL8 1455 aa5.27□□□□□ -1.57
RN7SKP209-201ENST00000516888 IQGAP3Q86VI3 1631 aa5.27□□□□□ -1.57
RN7SKP209-201ENST00000516888 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
RN7SKP209-201ENST00000516888 DCAF8Q5TAQ9 597 aa5.27□□□□□ -1.57
RN7SKP209-201ENST00000516888 EIF2AK4Q9P2K8 1649 aaKnown RBP5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 ATP10AO60312 1499 aa5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 UHRF1BP1Q6BDS2 1440 aa5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 ANP32CO43423 234 aa5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 GOLGA2Q08379 1002 aa5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 MKRN3Q13064 507 aaKnown RBP5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 FAM135AQ9P2D6 1515 aa5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 NUP155O75694 1391 aa5.26□□□□□ -1.57
RN7SKP209-201ENST00000516888 NEURL4Q96JN8 1562 aa5.25□□□□□ -1.57
RN7SKP209-201ENST00000516888 ROCK2O75116 1388 aaKnown RBP5.25□□□□□ -1.57
RN7SKP209-201ENST00000516888 ERCC6L2Q5T890 1561 aa5.25□□□□□ -1.57
RN7SKP209-201ENST00000516888 CCDC144AA2RUR9 1427 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 LAMC1P11047 1609 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 SLC24A1O60721 1099 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 PKD2Q13563 968 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 ZNF467Q7Z7K2 595 aaPredicted RBP5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 L3MBTL2Q969R5 705 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 KANK1Q14678 1352 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 FANCAO15360 1455 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 ZNF518AQ6AHZ1 1483 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 RALGAPBQ86X10 1494 aa5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 INO80Q9ULG1 1556 aaPredicted RBP5.24□□□□□ -1.57
RN7SKP209-201ENST00000516888 ZFYVE16Q7Z3T8 1539 aa5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 DEPDC5O75140 1603 aa5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 HNRNPMP52272 730 aaKnown RBP eCLIP5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 KTN1Q86UP2 1357 aaKnown RBP5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 ATP7AQ04656 1500 aa5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 SPAG9O60271 1321 aaKnown RBP5.23□□□□□ -1.57
RN7SKP209-201ENST00000516888 SPATA31E1Q6ZUB1 1445 aa5.22□□□□□ -1.57
RN7SKP209-201ENST00000516888 ASXL2Q76L83 1435 aa5.22□□□□□ -1.57
RN7SKP209-201ENST00000516888 CNTLNQ9NXG0 1405 aa5.22□□□□□ -1.57
RN7SKP209-201ENST00000516888 TET3O43151 1660 aa5.21□□□□□ -1.57
RN7SKP209-201ENST00000516888 ADGRL1O94910 1474 aa5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 NEO1Q92859 1461 aa5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 BCORL1Q5H9F3 1711 aa5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 DDX10Q13206 875 aaKnown RBP5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 RNF166Q96A37 237 aaPredicted RBP5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 PRDM15P57071 1507 aaPredicted RBP5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 KDM5CP41229 1560 aa5.21□□□□□ -1.58
RN7SKP209-201ENST00000516888 TRPM2O94759 1503 aa5.2□□□□□ -1.58
RN7SKP209-201ENST00000516888 HSPA5P11021 654 aaKnown RBP5.2□□□□□ -1.58
RN7SKP209-201ENST00000516888 HOXB3P14651 431 aaPredicted RBP5.2□□□□□ -1.58
RN7SKP209-201ENST00000516888 KCNH8Q96L42 1107 aa5.2□□□□□ -1.58
RN7SKP209-201ENST00000516888 VWDEQ8N2E2 1590 aa5.2□□□□□ -1.58
RN7SKP209-201ENST00000516888 MLH3Q9UHC1 1453 aa5.2□□□□□ -1.58
RN7SKP209-201ENST00000516888 DHX29Q7Z478 1369 aaKnown RBP5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 USP47Q96K76 1375 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 CCDC7Q96M83 1385 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 LMTK2Q8IWU2 1503 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 HOXB1P14653 301 aaPredicted RBP5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 GSE1Q14687 1217 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 ILDR1Q86SU0 546 aaPredicted RBP5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 ZNF710Q8N1W2 664 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 HECW2Q9P2P5 1572 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 CEP152O94986 1710 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 SPHKAPQ2M3C7 1700 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 TRPM1Q7Z4N2 1603 aa5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 RNF17Q9BXT8 1623 aaKnown RBP5.19□□□□□ -1.58
RN7SKP209-201ENST00000516888 ZC3H13Q5T200 1668 aaKnown RBP5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 GPRASP1Q5JY77 1395 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 KIAA1210Q9ULL0 1709 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 GLI2P10070 1586 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 PTPRTO14522 1441 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 CD109Q6YHK3 1445 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 PRAG1Q86YV5 1406 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 SCAPERQ9BY12 1400 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 TRAPPC8Q9Y2L5 1435 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 G3V3G9 751 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 PSEN1P49768 467 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 ERBB3P21860 1342 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 WASHC2AQ641Q2 1341 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
RN7SKP209-201ENST00000516888 EIF3AQ14152 1382 aaKnown RBP5.17□□□□□ -1.58
RN7SKP209-201ENST00000516888 POGZQ7Z3K3 1410 aa5.17□□□□□ -1.58
RN7SKP209-201ENST00000516888 DOK7Q18PE1 504 aa5.17□□□□□ -1.58
RN7SKP209-201ENST00000516888 CDCA8Q53HL2 280 aa5.17□□□□□ -1.58
RN7SKP209-201ENST00000516888 YTHDC1Q96MU7 727 aaKnown RBP5.17□□□□□ -1.58
RN7SKP209-201ENST00000516888 CARD11Q9BXL7 1154 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms