RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.7□□□□□ -1.5
SCARNA15.2-201ENST00000516409 MOXD2PA6NHM9 499 aa5.7□□□□□ -1.5
SCARNA15.2-201ENST00000516409 SPTLC1O15269 473 aa5.7□□□□□ -1.5
SCARNA15.2-201ENST00000516409 QPCTQ16769 361 aa5.7□□□□□ -1.5
SCARNA15.2-201ENST00000516409 RSBN1LQ6PCB5 846 aaPredicted RBP5.7□□□□□ -1.5
SCARNA15.2-201ENST00000516409 TBC1D2BQ9UPU7 963 aa5.7□□□□□ -1.5
SCARNA15.2-201ENST00000516409 DDX11L8A8MPP1 907 aa5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 AP1G2O75843 785 aa5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NDUFV2P19404 249 aa5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 IRF5Q13568 498 aa5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NUTM1Q86Y26 1132 aa5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 GLMNQ92990 594 aa5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 CALR3Q96L12 384 aaKnown RBP5.69□□□□□ -1.5
SCARNA15.2-201ENST00000516409 C3orf80F5H4A9 247 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 COL9A1P20849 921 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 TUSC1Q2TAM9 212 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 ARSIQ5FYB1 569 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 RTL5Q5HYW3 569 aaPredicted RBP5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 WWC1Q8IX03 1113 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 CABLES1Q8TDN4 633 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 EYA1Q99502 592 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 PCDHB15Q9Y5E8 787 aa5.68□□□□□ -1.5
SCARNA15.2-201ENST00000516409 USP17L8P0C7I0 530 aa5.67□□□□□ -1.5
SCARNA15.2-201ENST00000516409 TSKSQ9UJT2 592 aa5.67□□□□□ -1.5
SCARNA15.2-201ENST00000516409 LILRB3O75022 631 aa5.66□□□□□ -1.5
SCARNA15.2-201ENST00000516409 POTEIP0CG38 1075 aa5.66□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NUDT18Q6ZVK8 323 aa5.66□□□□□ -1.5
SCARNA15.2-201ENST00000516409 SULF1Q8IWU6 871 aa5.66□□□□□ -1.5
SCARNA15.2-201ENST00000516409 ZNF710Q8N1W2 664 aa5.66□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NUTM2BA6NNL0 878 aaPredicted RBP5.65□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NUTM2EB1AL46 878 aaPredicted RBP5.65□□□□□ -1.5
SCARNA15.2-201ENST00000516409 DNAJB2P25686 324 aa5.65□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NUTM2DQ5VT03 806 aaPredicted RBP5.65□□□□□ -1.5
SCARNA15.2-201ENST00000516409 NUTM2AQ8IVF1 878 aaPredicted RBP5.65□□□□□ -1.5
SCARNA15.2-201ENST00000516409 PRM3Q9NNZ6 103 aa5.65□□□□□ -1.5
SCARNA15.2-201ENST00000516409 SOCS7O14512 581 aa5.64□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PPP1R15AO75807 674 aaPredicted RBP5.64□□□□□ -1.51
SCARNA15.2-201ENST00000516409 RDH13Q8NBN7 331 aa5.64□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GJD4Q96KN9 370 aaPredicted RBP5.64□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PNMA3Q9UL41 463 aa5.64□□□□□ -1.51
SCARNA15.2-201ENST00000516409 NBPF26B4DH59 902 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 SMAPO00193 183 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 HOXB3P14651 431 aaPredicted RBP5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TMCO4Q5TGY1 634 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 ADAMTS19Q8TE59 1207 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TATDN2Q93075 761 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TMEM134Q9H6X4 195 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 LHX6Q9UPM6 363 aa5.63□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 KDM4AO75164 1064 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 RFX1P22670 979 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GJA5P36382 358 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 DOK7Q18PE1 504 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 HDGFL1Q5TGJ6 251 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 ZBTB3Q9H5J0 574 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 BCL2L12Q9HB09 334 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 HMX1Q9NP08 348 aaPredicted RBP5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 NDUFB9Q9Y6M9 179 aa5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 ACIN1Q9UKV3 1341 aaKnown RBP5.62□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TRIM6-TRIM34B2RNG4 842 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PPP1R3GB7ZBB8 358 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GUCA2AQ02747 115 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PPP4R3BQ5MIZ7 849 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PRPF38BQ5VTL8 546 aaKnown RBP5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GPR153Q6NV75 609 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 HLA-CQ95604 372 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PBXIP1Q96AQ6 731 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 MTMR7Q9Y216 660 aa5.61□□□□□ -1.51
SCARNA15.2-201ENST00000516409 HOXA2O43364 376 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GPR37L1O60883 481 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 FDX1P10109 184 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PTPREP23469 700 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 MFAP1P55081 439 aaKnown RBP5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 CTDSPL2Q05D32 466 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PROX2Q3B8N5 592 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 RGS22Q8NE09 1264 aa5.6□□□□□ -1.51
SCARNA15.2-201ENST00000516409 CARNS1A5YM72 827 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 RIMBP2O15034 1052 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 VAC14Q08AM6 782 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 CFAP70Q5T0N1 1121 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PACS2Q86VP3 889 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TSC1Q92574 1164 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 TRIM34Q9BYJ4 488 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 PCDHGC3Q9UN70 934 aa5.59□□□□□ -1.51
SCARNA15.2-201ENST00000516409 GCGRP47871 477 aa5.58□□□□□ -1.52
SCARNA15.2-201ENST00000516409 FOXD4L5Q5VV16 416 aaPredicted RBP5.58□□□□□ -1.52
SCARNA15.2-201ENST00000516409 LRRN4Q8WUT4 740 aa5.58□□□□□ -1.52
SCARNA15.2-201ENST00000516409 FOXD4L4Q8WXT5 416 aaPredicted RBP5.58□□□□□ -1.52
SCARNA15.2-201ENST00000516409 ZSWIM6Q9HCJ5 1215 aa5.58□□□□□ -1.52
SCARNA15.2-201ENST00000516409 SLC10A3P09131 477 aa5.57□□□□□ -1.52
SCARNA15.2-201ENST00000516409 USP46P62068 366 aa5.57□□□□□ -1.52
SCARNA15.2-201ENST00000516409 PDE4CQ08493 712 aa5.57□□□□□ -1.52
SCARNA15.2-201ENST00000516409 WASHC4Q2M389 1173 aa5.57□□□□□ -1.52
SCARNA15.2-201ENST00000516409 PPP1R12CQ9BZL4 782 aa5.57□□□□□ -1.52
SCARNA15.2-201ENST00000516409 CFAP99D6REC4 459 aa5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 CSB-PGBD3P0DP91 1061 aa5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 SRPK2P78362 688 aaKnown RBP5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 MTMR2Q13614 643 aa5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 HELBQ8NG08 1087 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms