RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
PDE4D-225ENST00000515835 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
PDE4D-225ENST00000515835 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
PDE4D-225ENST00000515835 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
PDE4D-225ENST00000515835 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
PDE4D-225ENST00000515835 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
PDE4D-225ENST00000515835 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
PDE4D-225ENST00000515835 GPBP1L1Q9HC44 474 aaPredicted RBP12.63□□□□□ -0.39
PDE4D-225ENST00000515835 SAMD7Q7Z3H4 446 aa12.62□□□□□ -0.39
PDE4D-225ENST00000515835 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
PDE4D-225ENST00000515835 KDM4CQ9H3R0 1056 aa12.62□□□□□ -0.39
PDE4D-225ENST00000515835 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
PDE4D-225ENST00000515835 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
PDE4D-225ENST00000515835 SULF1Q8IWU6 871 aa12.6□□□□□ -0.39
PDE4D-225ENST00000515835 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
PDE4D-225ENST00000515835 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
PDE4D-225ENST00000515835 WNT2BQ93097 391 aa12.59□□□□□ -0.39
PDE4D-225ENST00000515835 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-225ENST00000515835 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-225ENST00000515835 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
PDE4D-225ENST00000515835 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
PDE4D-225ENST00000515835 DDX11L8A8MPP1 907 aa12.56□□□□□ -0.4
PDE4D-225ENST00000515835 MS4A1P11836 297 aa12.55□□□□□ -0.4
PDE4D-225ENST00000515835 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
PDE4D-225ENST00000515835 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
PDE4D-225ENST00000515835 SPNS2Q8IVW8 549 aa12.54□□□□□ -0.4
PDE4D-225ENST00000515835 CD46P15529 392 aa12.53□□□□□ -0.4
PDE4D-225ENST00000515835 RNF40O75150 1001 aa12.52□□□□□ -0.41
PDE4D-225ENST00000515835 BCAMP50895 628 aa12.52□□□□□ -0.41
PDE4D-225ENST00000515835 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
PDE4D-225ENST00000515835 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.41
PDE4D-225ENST00000515835 SLC10A3P09131 477 aa12.51□□□□□ -0.41
PDE4D-225ENST00000515835 THSD4Q6ZMP0 1018 aa12.51□□□□□ -0.41
PDE4D-225ENST00000515835 DDRGK1Q96HY6 314 aa12.51□□□□□ -0.41
PDE4D-225ENST00000515835 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
PDE4D-225ENST00000515835 TSR3Q9UJK0 312 aaKnown RBP12.5□□□□□ -0.41
PDE4D-225ENST00000515835 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
PDE4D-225ENST00000515835 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
PDE4D-225ENST00000515835 PPP4CP60510 307 aa12.48□□□□□ -0.41
PDE4D-225ENST00000515835 GCGRP47871 477 aa12.46□□□□□ -0.41
PDE4D-225ENST00000515835 CFHP08603 1231 aa12.44□□□□□ -0.42
PDE4D-225ENST00000515835 KMT5BQ4FZB7 885 aa12.44□□□□□ -0.42
PDE4D-225ENST00000515835 IL27Q8NEV9 243 aa12.44□□□□□ -0.42
PDE4D-225ENST00000515835 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
PDE4D-225ENST00000515835 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
PDE4D-225ENST00000515835 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
PDE4D-225ENST00000515835 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
PDE4D-225ENST00000515835 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
PDE4D-225ENST00000515835 WBP1LQ9NX94 342 aa12.43□□□□□ -0.42
PDE4D-225ENST00000515835 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
PDE4D-225ENST00000515835 KDM4AO75164 1064 aa12.41□□□□□ -0.42
PDE4D-225ENST00000515835 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
PDE4D-225ENST00000515835 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
PDE4D-225ENST00000515835 USP46P62068 366 aa12.4□□□□□ -0.42
PDE4D-225ENST00000515835 TMEM132AQ24JP5 1023 aa12.4□□□□□ -0.42
PDE4D-225ENST00000515835 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
PDE4D-225ENST00000515835 PTPN5P54829 565 aa12.39□□□□□ -0.43
PDE4D-225ENST00000515835 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
PDE4D-225ENST00000515835 NACADO15069 1562 aa12.39□□□□□ -0.43
PDE4D-225ENST00000515835 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
PDE4D-225ENST00000515835 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
PDE4D-225ENST00000515835 APLP1P51693 650 aa12.37□□□□□ -0.43
PDE4D-225ENST00000515835 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
PDE4D-225ENST00000515835 HCSTQ9UBK5 93 aa12.36□□□□□ -0.43
PDE4D-225ENST00000515835 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
PDE4D-225ENST00000515835 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
PDE4D-225ENST00000515835 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
PDE4D-225ENST00000515835 FUT2Q10981 343 aa12.34□□□□□ -0.43
PDE4D-225ENST00000515835 MYSM1Q5VVJ2 828 aa12.34□□□□□ -0.43
PDE4D-225ENST00000515835 HOXA2O43364 376 aa12.33□□□□□ -0.44
PDE4D-225ENST00000515835 GJA5P36382 358 aa12.32□□□□□ -0.44
PDE4D-225ENST00000515835 SKIV2LQ15477 1246 aaKnown RBP12.32□□□□□ -0.44
PDE4D-225ENST00000515835 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
PDE4D-225ENST00000515835 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
PDE4D-225ENST00000515835 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
PDE4D-225ENST00000515835 SPTLC1O15269 473 aa12.29□□□□□ -0.44
PDE4D-225ENST00000515835 MORN1Q5T089 497 aa12.29□□□□□ -0.44
PDE4D-225ENST00000515835 RSBN1LQ6PCB5 846 aaPredicted RBP12.29□□□□□ -0.44
PDE4D-225ENST00000515835 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
PDE4D-225ENST00000515835 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
PDE4D-225ENST00000515835 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
PDE4D-225ENST00000515835 NDUFV2P19404 249 aa12.27□□□□□ -0.45
PDE4D-225ENST00000515835 POLR3EQ9NVU0 708 aa12.27□□□□□ -0.45
PDE4D-225ENST00000515835 FDX1P10109 184 aa12.26□□□□□ -0.45
PDE4D-225ENST00000515835 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
PDE4D-225ENST00000515835 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
PDE4D-225ENST00000515835 NR1I2O75469 434 aa12.25□□□□□ -0.45
PDE4D-225ENST00000515835 LIMD1Q9UGP4 676 aa12.25□□□□□ -0.45
PDE4D-225ENST00000515835 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
PDE4D-225ENST00000515835 HLA-CQ95604 372 aa12.24□□□□□ -0.45
PDE4D-225ENST00000515835 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
PDE4D-225ENST00000515835 GUCA2AQ02747 115 aa12.22□□□□□ -0.45
PDE4D-225ENST00000515835 Q3C1V9 767 aa12.22□□□□□ -0.45
PDE4D-225ENST00000515835 MTRQ99707 1265 aa12.22□□□□□ -0.45
PDE4D-225ENST00000515835 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
PDE4D-225ENST00000515835 COPS2P61201 443 aa12.21□□□□□ -0.45
PDE4D-225ENST00000515835 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
PDE4D-225ENST00000515835 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.45
PDE4D-225ENST00000515835 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
PDE4D-225ENST00000515835 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms