RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
THUMPD3-210ENST00000515662 ADGRF5Q8IZF2 1346 aa21.3■■□□□ 1
THUMPD3-210ENST00000515662 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
THUMPD3-210ENST00000515662 SCAF11Q99590 1463 aaKnown RBP21.3■■□□□ 1
THUMPD3-210ENST00000515662 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
THUMPD3-210ENST00000515662 DISP3Q9P2K9 1392 aa21.27■■□□□ 1
THUMPD3-210ENST00000515662 PPLO60437 1756 aa21.27■■□□□ 1
THUMPD3-210ENST00000515662 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
THUMPD3-210ENST00000515662 CFAP70Q5T0N1 1121 aa21.25■□□□□ 0.99
THUMPD3-210ENST00000515662 PREX1Q8TCU6 1659 aa21.25■□□□□ 0.99
THUMPD3-210ENST00000515662 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
THUMPD3-210ENST00000515662 TMF1P82094 1093 aa21.24■□□□□ 0.99
THUMPD3-210ENST00000515662 CCDC184Q52MB2 194 aa21.22■□□□□ 0.99
THUMPD3-210ENST00000515662 SLC52A1Q9NWF4 448 aa21.22■□□□□ 0.99
THUMPD3-210ENST00000515662 IDI1Q13907 227 aa21.22■□□□□ 0.99
THUMPD3-210ENST00000515662 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
THUMPD3-210ENST00000515662 EIF3AQ14152 1382 aaKnown RBP21.21■□□□□ 0.99
THUMPD3-210ENST00000515662 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
THUMPD3-210ENST00000515662 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
THUMPD3-210ENST00000515662 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
THUMPD3-210ENST00000515662 ERVK-7P63135 1459 aa21.18■□□□□ 0.98
THUMPD3-210ENST00000515662 FBXO31Q5XUX0 539 aaPredicted RBP21.17■□□□□ 0.98
THUMPD3-210ENST00000515662 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
THUMPD3-210ENST00000515662 C14orf93Q9H972 538 aaKnown RBP21.16■□□□□ 0.98
THUMPD3-210ENST00000515662 TMEM131LA2VDJ0 1609 aa21.15■□□□□ 0.98
THUMPD3-210ENST00000515662 VGFO15240 615 aaPredicted RBP21.14■□□□□ 0.97
THUMPD3-210ENST00000515662 CNGB1Q14028 1251 aaPredicted RBP21.14■□□□□ 0.97
THUMPD3-210ENST00000515662 MLECQ14165 292 aa21.13■□□□□ 0.97
THUMPD3-210ENST00000515662 ADGRB1O14514 1584 aa21.13■□□□□ 0.97
THUMPD3-210ENST00000515662 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
THUMPD3-210ENST00000515662 PER1O15534 1290 aaPredicted RBP21.12■□□□□ 0.97
THUMPD3-210ENST00000515662 MYO3AQ8NEV4 1616 aa21.12■□□□□ 0.97
THUMPD3-210ENST00000515662 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
THUMPD3-210ENST00000515662 CDCA8Q53HL2 280 aa21.11■□□□□ 0.97
THUMPD3-210ENST00000515662 MYO5BQ9ULV0 1848 aa21.11■□□□□ 0.97
THUMPD3-210ENST00000515662 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
THUMPD3-210ENST00000515662 PANK3Q9H999 370 aa21.1■□□□□ 0.97
THUMPD3-210ENST00000515662 RALBP1Q15311 655 aa21.09■□□□□ 0.97
THUMPD3-210ENST00000515662 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
THUMPD3-210ENST00000515662 SLC24A1O60721 1099 aa21.09■□□□□ 0.97
THUMPD3-210ENST00000515662 HNRNPUQ00839 825 aaKnown RBP eCLIP21.08■□□□□ 0.96
THUMPD3-210ENST00000515662 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
THUMPD3-210ENST00000515662 SBNO2Q9Y2G9 1366 aa21.06■□□□□ 0.96
THUMPD3-210ENST00000515662 TMEM132EQ6IEE7 984 aa21.05■□□□□ 0.96
THUMPD3-210ENST00000515662 PARD3Q8TEW0 1356 aa21.05■□□□□ 0.96
THUMPD3-210ENST00000515662 MYBBP1AQ9BQG0 1328 aaKnown RBP21.05■□□□□ 0.96
THUMPD3-210ENST00000515662 KDM5AP29375 1690 aaKnown RBP21.05■□□□□ 0.96
THUMPD3-210ENST00000515662 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
THUMPD3-210ENST00000515662 TRAK1Q9UPV9 953 aa21.04■□□□□ 0.96
THUMPD3-210ENST00000515662 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
THUMPD3-210ENST00000515662 MYOM1P52179 1685 aa21.03■□□□□ 0.96
THUMPD3-210ENST00000515662 ZMYM3Q14202 1370 aa21.03■□□□□ 0.96
THUMPD3-210ENST00000515662 BRD4O60885 1362 aaPredicted RBP21.01■□□□□ 0.95
THUMPD3-210ENST00000515662 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
THUMPD3-210ENST00000515662 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
THUMPD3-210ENST00000515662 QRICH2Q9H0J4 1663 aa21■□□□□ 0.95
THUMPD3-210ENST00000515662 TMC1Q8TDI8 760 aa20.99■□□□□ 0.95
THUMPD3-210ENST00000515662 ASXL1Q8IXJ9 1541 aa20.98■□□□□ 0.95
THUMPD3-210ENST00000515662 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
THUMPD3-210ENST00000515662 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
THUMPD3-210ENST00000515662 PNISRQ8TF01 805 aaKnown RBP20.97■□□□□ 0.95
THUMPD3-210ENST00000515662 ARHGEF28Q8N1W1 1705 aaKnown RBP20.97■□□□□ 0.95
THUMPD3-210ENST00000515662 NLRP13Q86W25 1043 aa20.96■□□□□ 0.95
THUMPD3-210ENST00000515662 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
THUMPD3-210ENST00000515662 RIMS2Q9UQ26 1411 aa20.93■□□□□ 0.94
THUMPD3-210ENST00000515662 AMER1Q5JTC6 1135 aaPredicted RBP20.93■□□□□ 0.94
THUMPD3-210ENST00000515662 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
THUMPD3-210ENST00000515662 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
THUMPD3-210ENST00000515662 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
THUMPD3-210ENST00000515662 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
THUMPD3-210ENST00000515662 TNRQ92752 1358 aa20.91■□□□□ 0.94
THUMPD3-210ENST00000515662 NPC1L1Q9UHC9 1359 aa20.89■□□□□ 0.94
THUMPD3-210ENST00000515662 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.93
THUMPD3-210ENST00000515662 STK26Q9P289 416 aa20.88■□□□□ 0.93
THUMPD3-210ENST00000515662 PTPRMP28827 1452 aa20.88■□□□□ 0.93
THUMPD3-210ENST00000515662 TULP4Q9NRJ4 1543 aa20.87■□□□□ 0.93
THUMPD3-210ENST00000515662 PUS7Q96PZ0 661 aaKnown RBP20.86■□□□□ 0.93
THUMPD3-210ENST00000515662 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
THUMPD3-210ENST00000515662 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
THUMPD3-210ENST00000515662 SUPT16HQ9Y5B9 1047 aaKnown RBP20.86■□□□□ 0.93
THUMPD3-210ENST00000515662 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.85■□□□□ 0.93
THUMPD3-210ENST00000515662 SETD1AO15047 1707 aaKnown RBP20.84■□□□□ 0.93
THUMPD3-210ENST00000515662 UBR1Q8IWV7 1749 aa20.82■□□□□ 0.92
THUMPD3-210ENST00000515662 NRXN3Q9Y4C0 1643 aa20.82■□□□□ 0.92
THUMPD3-210ENST00000515662 PPP2R1AP30153 589 aa20.81■□□□□ 0.92
THUMPD3-210ENST00000515662 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
THUMPD3-210ENST00000515662 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
THUMPD3-210ENST00000515662 SLC12A5Q9H2X9 1139 aa20.81■□□□□ 0.92
THUMPD3-210ENST00000515662 CEBPAP49715 358 aaPredicted RBP20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 HDGFP51858 240 aaKnown RBP20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 C3P01024 1663 aa20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 DLC1Q96QB1 1528 aa20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 FER1L4A9Z1Z3 1794 aa20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 POGKQ9P215 609 aa20.79■□□□□ 0.92
THUMPD3-210ENST00000515662 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
THUMPD3-210ENST00000515662 NSD3Q9BZ95 1437 aa20.76■□□□□ 0.91
THUMPD3-210ENST00000515662 INSRP06213 1382 aa20.76■□□□□ 0.91
THUMPD3-210ENST00000515662 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms