RNA–Protein interactions for RNA: ENST00000515410.1

RAB3A-204, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-204ENST00000515410 LRP6O75581 1613 aa20.86■□□□□ 0.93
RAB3A-204ENST00000515410 IDI1Q13907 227 aa20.84■□□□□ 0.93
RAB3A-204ENST00000515410 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
RAB3A-204ENST00000515410 CHIC2Q9UKJ5 165 aa20.84■□□□□ 0.93
RAB3A-204ENST00000515410 COL16A1Q07092 1604 aaPredicted RBP20.84■□□□□ 0.93
RAB3A-204ENST00000515410 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
RAB3A-204ENST00000515410 MEX3CQ5U5Q3 659 aaKnown RBP20.83■□□□□ 0.93
RAB3A-204ENST00000515410 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
RAB3A-204ENST00000515410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
RAB3A-204ENST00000515410 KANK1Q14678 1352 aa20.8■□□□□ 0.92
RAB3A-204ENST00000515410 ADGRB3O60242 1522 aa20.78■□□□□ 0.92
RAB3A-204ENST00000515410 RXRBP28702 533 aa20.77■□□□□ 0.92
RAB3A-204ENST00000515410 BCANQ96GW7 911 aa20.77■□□□□ 0.92
RAB3A-204ENST00000515410 LMTK2Q8IWU2 1503 aa20.77■□□□□ 0.92
RAB3A-204ENST00000515410 SRCAPQ6ZRS2 3230 aa20.77■□□□□ 0.92
RAB3A-204ENST00000515410 CDK12Q9NYV4 1490 aaPredicted RBP20.76■□□□□ 0.91
RAB3A-204ENST00000515410 NOS1P29475 1434 aa20.75■□□□□ 0.91
RAB3A-204ENST00000515410 NCOA3Q9Y6Q9 1424 aa20.75■□□□□ 0.91
RAB3A-204ENST00000515410 AHDC1Q5TGY3 1603 aaPredicted RBP20.74■□□□□ 0.91
RAB3A-204ENST00000515410 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
RAB3A-204ENST00000515410 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
RAB3A-204ENST00000515410 SHPRHQ149N8 1683 aa20.72■□□□□ 0.91
RAB3A-204ENST00000515410 ROCK1Q13464 1354 aa20.71■□□□□ 0.91
RAB3A-204ENST00000515410 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
RAB3A-204ENST00000515410 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
RAB3A-204ENST00000515410 CADPS2Q86UW7 1296 aa20.7■□□□□ 0.9
RAB3A-204ENST00000515410 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
RAB3A-204ENST00000515410 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
RAB3A-204ENST00000515410 C14orf37Q86TY3 774 aa20.69■□□□□ 0.9
RAB3A-204ENST00000515410 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
RAB3A-204ENST00000515410 TBX22Q9Y458 520 aa20.67■□□□□ 0.9
RAB3A-204ENST00000515410 PPP1R15AO75807 674 aaPredicted RBP20.66■□□□□ 0.9
RAB3A-204ENST00000515410 ATF3P18847 181 aa20.66■□□□□ 0.9
RAB3A-204ENST00000515410 DIP2AQ14689 1571 aa20.65■□□□□ 0.9
RAB3A-204ENST00000515410 AFF2P51816 1311 aa20.65■□□□□ 0.9
RAB3A-204ENST00000515410 NUTM2BA6NNL0 878 aaPredicted RBP20.65■□□□□ 0.9
RAB3A-204ENST00000515410 NUTM2EB1AL46 878 aaPredicted RBP20.65■□□□□ 0.9
RAB3A-204ENST00000515410 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
RAB3A-204ENST00000515410 NUTM2AQ8IVF1 878 aaPredicted RBP20.65■□□□□ 0.9
RAB3A-204ENST00000515410 RIMS2Q9UQ26 1411 aa20.64■□□□□ 0.89
RAB3A-204ENST00000515410 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
RAB3A-204ENST00000515410 BRINP3Q76B58 766 aa20.62■□□□□ 0.89
RAB3A-204ENST00000515410 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
RAB3A-204ENST00000515410 RGS12O14924 1447 aa20.61■□□□□ 0.89
RAB3A-204ENST00000515410 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
RAB3A-204ENST00000515410 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
RAB3A-204ENST00000515410 ADAMTS13Q76LX8 1427 aa20.59■□□□□ 0.89
RAB3A-204ENST00000515410 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
RAB3A-204ENST00000515410 UNC13BO14795 1591 aa20.59■□□□□ 0.89
RAB3A-204ENST00000515410 ITGAEP38570 1179 aa20.58■□□□□ 0.89
RAB3A-204ENST00000515410 RBM6P78332 1123 aaKnown RBP20.58■□□□□ 0.89
RAB3A-204ENST00000515410 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.89
RAB3A-204ENST00000515410 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
RAB3A-204ENST00000515410 DCCP43146 1447 aa20.56■□□□□ 0.88
RAB3A-204ENST00000515410 ASXL1Q8IXJ9 1541 aa20.56■□□□□ 0.88
RAB3A-204ENST00000515410 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
RAB3A-204ENST00000515410 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
RAB3A-204ENST00000515410 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
RAB3A-204ENST00000515410 C8orf37Q96NL8 207 aa20.54■□□□□ 0.88
RAB3A-204ENST00000515410 MYO5BQ9ULV0 1848 aa20.53■□□□□ 0.88
RAB3A-204ENST00000515410 LRRC59Q96AG4 307 aaKnown RBP20.52■□□□□ 0.88
RAB3A-204ENST00000515410 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
RAB3A-204ENST00000515410 AMOTL2Q9Y2J4 779 aa20.51■□□□□ 0.87
RAB3A-204ENST00000515410 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
RAB3A-204ENST00000515410 TRPM2O94759 1503 aa20.5■□□□□ 0.87
RAB3A-204ENST00000515410 NGLY1Q96IV0 654 aa20.5■□□□□ 0.87
RAB3A-204ENST00000515410 NUP155O75694 1391 aa20.49■□□□□ 0.87
RAB3A-204ENST00000515410 PNPLA6Q8IY17 1366 aa20.49■□□□□ 0.87
RAB3A-204ENST00000515410 CHGAP10645 457 aaKnown RBP20.49■□□□□ 0.87
RAB3A-204ENST00000515410 FOXD1Q16676 465 aa20.49■□□□□ 0.87
RAB3A-204ENST00000515410 MST1RQ04912 1400 aa20.49■□□□□ 0.87
RAB3A-204ENST00000515410 PTPRUQ92729 1446 aa20.49■□□□□ 0.87
RAB3A-204ENST00000515410 NHSL1Q5SYE7 1610 aa20.49■□□□□ 0.87
RAB3A-204ENST00000515410 ZRANB1Q9UGI0 708 aa20.48■□□□□ 0.87
RAB3A-204ENST00000515410 E9PCH4 1651 aa20.47■□□□□ 0.87
RAB3A-204ENST00000515410 NAIPQ13075 1403 aa20.44■□□□□ 0.86
RAB3A-204ENST00000515410 DDX17Q92841 729 aaKnown RBP20.42■□□□□ 0.86
RAB3A-204ENST00000515410 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
RAB3A-204ENST00000515410 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
RAB3A-204ENST00000515410 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
RAB3A-204ENST00000515410 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
RAB3A-204ENST00000515410 USP21Q9UK80 565 aa20.39■□□□□ 0.85
RAB3A-204ENST00000515410 TRPC5Q9UL62 973 aaPredicted RBP20.39■□□□□ 0.85
RAB3A-204ENST00000515410 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
RAB3A-204ENST00000515410 EP400Q96L91 3159 aa20.37■□□□□ 0.85
RAB3A-204ENST00000515410 CCDC125Q86Z20 511 aa20.36■□□□□ 0.85
RAB3A-204ENST00000515410 FNBP4Q8N3X1 1017 aaPredicted RBP20.35■□□□□ 0.85
RAB3A-204ENST00000515410 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
RAB3A-204ENST00000515410 ATRNO75882 1429 aa20.34■□□□□ 0.85
RAB3A-204ENST00000515410 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
RAB3A-204ENST00000515410 METP08581 1390 aa20.34■□□□□ 0.85
RAB3A-204ENST00000515410 SPHKAPQ2M3C7 1700 aa20.32■□□□□ 0.84
RAB3A-204ENST00000515410 LAMC1P11047 1609 aa20.31■□□□□ 0.84
RAB3A-204ENST00000515410 C1orf167Q5SNV9 1468 aa20.31■□□□□ 0.84
RAB3A-204ENST00000515410 SOS2Q07890 1332 aaPredicted RBP20.31■□□□□ 0.84
RAB3A-204ENST00000515410 NALCNQ8IZF0 1738 aa20.29■□□□□ 0.84
RAB3A-204ENST00000515410 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
RAB3A-204ENST00000515410 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
RAB3A-204ENST00000515410 COL22A1Q8NFW1 1626 aaPredicted RBP20.24■□□□□ 0.83
RAB3A-204ENST00000515410 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms