RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
PAPD4-216ENST00000515298 PTPN5P54829 565 aa10.46□□□□□ -0.73
PAPD4-216ENST00000515298 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
PAPD4-216ENST00000515298 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
PAPD4-216ENST00000515298 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
PAPD4-216ENST00000515298 AK7Q96M32 723 aa10.45□□□□□ -0.74
PAPD4-216ENST00000515298 TSR3Q9UJK0 312 aaKnown RBP10.45□□□□□ -0.74
PAPD4-216ENST00000515298 WBP1LQ9NX94 342 aa10.44□□□□□ -0.74
PAPD4-216ENST00000515298 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
PAPD4-216ENST00000515298 RNF40O75150 1001 aa10.42□□□□□ -0.74
PAPD4-216ENST00000515298 PPP4CP60510 307 aa10.42□□□□□ -0.74
PAPD4-216ENST00000515298 TPRNQ4KMQ1 711 aa10.42□□□□□ -0.74
PAPD4-216ENST00000515298 TRIM66O15016 1216 aa10.41□□□□□ -0.74
PAPD4-216ENST00000515298 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
PAPD4-216ENST00000515298 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
PAPD4-216ENST00000515298 AMHR2Q16671 573 aa10.4□□□□□ -0.74
PAPD4-216ENST00000515298 TMUB1Q9BVT8 246 aa10.4□□□□□ -0.74
PAPD4-216ENST00000515298 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
PAPD4-216ENST00000515298 SLC10A3P09131 477 aa10.38□□□□□ -0.75
PAPD4-216ENST00000515298 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
PAPD4-216ENST00000515298 CLCN1P35523 988 aa10.37□□□□□ -0.75
PAPD4-216ENST00000515298 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
PAPD4-216ENST00000515298 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
PAPD4-216ENST00000515298 DDX11L8A8MPP1 907 aa10.35□□□□□ -0.75
PAPD4-216ENST00000515298 APLP1P51693 650 aa10.35□□□□□ -0.75
PAPD4-216ENST00000515298 SULF1Q8IWU6 871 aa10.35□□□□□ -0.75
PAPD4-216ENST00000515298 PDE4DQ08499 809 aa10.33□□□□□ -0.76
PAPD4-216ENST00000515298 TTLL12Q14166 644 aaPredicted RBP10.33□□□□□ -0.76
PAPD4-216ENST00000515298 RSPH4AQ5TD94 716 aa10.33□□□□□ -0.76
PAPD4-216ENST00000515298 PARP9Q8IXQ6 854 aa10.33□□□□□ -0.76
PAPD4-216ENST00000515298 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
PAPD4-216ENST00000515298 CFHP08603 1231 aa10.32□□□□□ -0.76
PAPD4-216ENST00000515298 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
PAPD4-216ENST00000515298 CD46P15529 392 aa10.31□□□□□ -0.76
PAPD4-216ENST00000515298 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
PAPD4-216ENST00000515298 PRKCSHP14314 528 aaPredicted RBP10.3□□□□□ -0.76
PAPD4-216ENST00000515298 PRR14Q9BWN1 585 aa10.3□□□□□ -0.76
PAPD4-216ENST00000515298 GCGRP47871 477 aa10.29□□□□□ -0.76
PAPD4-216ENST00000515298 KMT5BQ4FZB7 885 aa10.29□□□□□ -0.76
PAPD4-216ENST00000515298 ACTN4O43707 911 aaKnown RBP10.28□□□□□ -0.76
PAPD4-216ENST00000515298 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
PAPD4-216ENST00000515298 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
PAPD4-216ENST00000515298 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
PAPD4-216ENST00000515298 MS4A1P11836 297 aa10.24□□□□□ -0.77
PAPD4-216ENST00000515298 MTRQ99707 1265 aa10.24□□□□□ -0.77
PAPD4-216ENST00000515298 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
PAPD4-216ENST00000515298 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
PAPD4-216ENST00000515298 FUT2Q10981 343 aa10.22□□□□□ -0.77
PAPD4-216ENST00000515298 KDM4AO75164 1064 aa10.21□□□□□ -0.77
PAPD4-216ENST00000515298 COPS2P61201 443 aa10.21□□□□□ -0.77
PAPD4-216ENST00000515298 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
PAPD4-216ENST00000515298 IL21Q9HBE4 155 aa10.21□□□□□ -0.77
PAPD4-216ENST00000515298 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
PAPD4-216ENST00000515298 KCNC4Q03721 635 aa10.2□□□□□ -0.78
PAPD4-216ENST00000515298 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
PAPD4-216ENST00000515298 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
PAPD4-216ENST00000515298 ATP6V1AP38606 617 aa10.19□□□□□ -0.78
PAPD4-216ENST00000515298 PUS10Q3MIT2 529 aaKnown RBP10.19□□□□□ -0.78
PAPD4-216ENST00000515298 ZNF516Q92618 1163 aa10.19□□□□□ -0.78
PAPD4-216ENST00000515298 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
PAPD4-216ENST00000515298 USP46P62068 366 aa10.18□□□□□ -0.78
PAPD4-216ENST00000515298 MORN1Q5T089 497 aa10.18□□□□□ -0.78
PAPD4-216ENST00000515298 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
PAPD4-216ENST00000515298 SPIRE2Q8WWL2 714 aa10.17□□□□□ -0.78
PAPD4-216ENST00000515298 ZPR1O75312 459 aa10.16□□□□□ -0.78
PAPD4-216ENST00000515298 NR1I2O75469 434 aa10.16□□□□□ -0.78
PAPD4-216ENST00000515298 GRIPAP1Q4V328 841 aa10.16□□□□□ -0.78
PAPD4-216ENST00000515298 HOXA2O43364 376 aa10.15□□□□□ -0.78
PAPD4-216ENST00000515298 BRPF1P55201 1214 aaPredicted RBP10.15□□□□□ -0.78
PAPD4-216ENST00000515298 NEUROD2Q15784 382 aa10.15□□□□□ -0.78
PAPD4-216ENST00000515298 SCUBE3Q8IX30 993 aa10.15□□□□□ -0.78
PAPD4-216ENST00000515298 HLA-CQ95604 372 aa10.14□□□□□ -0.79
PAPD4-216ENST00000515298 SLC27A5Q9Y2P5 690 aa10.14□□□□□ -0.79
PAPD4-216ENST00000515298 NKX2-3Q8TAU0 364 aa10.13□□□□□ -0.79
PAPD4-216ENST00000515298 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
PAPD4-216ENST00000515298 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
PAPD4-216ENST00000515298 TLL1O43897 1013 aa10.11□□□□□ -0.79
PAPD4-216ENST00000515298 DIXDC1Q155Q3 683 aa10.11□□□□□ -0.79
PAPD4-216ENST00000515298 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
PAPD4-216ENST00000515298 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
PAPD4-216ENST00000515298 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
PAPD4-216ENST00000515298 SALL2Q9Y467 1007 aaPredicted RBP10.1□□□□□ -0.79
PAPD4-216ENST00000515298 NDUFV2P19404 249 aa10.09□□□□□ -0.79
PAPD4-216ENST00000515298 BRICD5Q6PL45 260 aa10.09□□□□□ -0.79
PAPD4-216ENST00000515298 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
PAPD4-216ENST00000515298 PLEKHG3A1L390 1219 aa10.08□□□□□ -0.8
PAPD4-216ENST00000515298 A0A0G2JS52 829 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
PAPD4-216ENST00000515298 ADH1BP00325 375 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 FDX1P10109 184 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 Q3C1V9 767 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 MYSM1Q5VVJ2 828 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 SPSB2Q99619 263 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
PAPD4-216ENST00000515298 GJA5P36382 358 aa10.06□□□□□ -0.8
PAPD4-216ENST00000515298 RSBN1LQ6PCB5 846 aaPredicted RBP10.06□□□□□ -0.8
PAPD4-216ENST00000515298 SPTLC1O15269 473 aa10.05□□□□□ -0.8
PAPD4-216ENST00000515298 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
PAPD4-216ENST00000515298 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms