RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
CAST-243ENST00000515160 NPM2Q86SE8 214 aaKnown RBP9.86□□□□□ -0.83
CAST-243ENST00000515160 ZNF777Q9ULD5 760 aaPredicted RBP9.86□□□□□ -0.83
CAST-243ENST00000515160 SLC34A2O95436 690 aa9.85□□□□□ -0.83
CAST-243ENST00000515160 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
CAST-243ENST00000515160 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
CAST-243ENST00000515160 DCAF1Q9Y4B6 1507 aa9.85□□□□□ -0.83
CAST-243ENST00000515160 PROCA1Q8NCQ7 364 aaPredicted RBP9.84□□□□□ -0.83
CAST-243ENST00000515160 RBM33Q96EV2 1170 aaKnown RBP9.83□□□□□ -0.84
CAST-243ENST00000515160 CCDC97Q96F63 343 aaPredicted RBP9.83□□□□□ -0.84
CAST-243ENST00000515160 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
CAST-243ENST00000515160 SERPINA10Q9UK55 444 aa9.83□□□□□ -0.84
CAST-243ENST00000515160 ZCCHC6Q5VYS8 1495 aaKnown RBP9.83□□□□□ -0.84
CAST-243ENST00000515160 FNBP4Q8N3X1 1017 aaPredicted RBP9.82□□□□□ -0.84
CAST-243ENST00000515160 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
CAST-243ENST00000515160 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
CAST-243ENST00000515160 OATP04181 439 aa9.81□□□□□ -0.84
CAST-243ENST00000515160 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
CAST-243ENST00000515160 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
CAST-243ENST00000515160 SPDYE5A6NIY4 337 aa9.8□□□□□ -0.84
CAST-243ENST00000515160 TSR1Q2NL82 804 aaKnown RBP9.79□□□□□ -0.84
CAST-243ENST00000515160 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
CAST-243ENST00000515160 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
CAST-243ENST00000515160 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
CAST-243ENST00000515160 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
CAST-243ENST00000515160 HRO43593 1189 aa9.78□□□□□ -0.84
CAST-243ENST00000515160 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
CAST-243ENST00000515160 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
CAST-243ENST00000515160 KCNH8Q96L42 1107 aa9.78□□□□□ -0.84
CAST-243ENST00000515160 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
CAST-243ENST00000515160 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
CAST-243ENST00000515160 FBXW7Q969H0 707 aa9.77□□□□□ -0.85
CAST-243ENST00000515160 DIXDC1Q155Q3 683 aa9.76□□□□□ -0.85
CAST-243ENST00000515160 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
CAST-243ENST00000515160 CERKQ8TCT0 537 aa9.76□□□□□ -0.85
CAST-243ENST00000515160 COG6Q9Y2V7 657 aa9.76□□□□□ -0.85
CAST-243ENST00000515160 IFFO2Q5TF58 517 aa9.75□□□□□ -0.85
CAST-243ENST00000515160 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
CAST-243ENST00000515160 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
CAST-243ENST00000515160 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
CAST-243ENST00000515160 RFC5P40937 340 aa9.74□□□□□ -0.85
CAST-243ENST00000515160 PADI6Q6TGC4 694 aa9.74□□□□□ -0.85
CAST-243ENST00000515160 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
CAST-243ENST00000515160 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
CAST-243ENST00000515160 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
CAST-243ENST00000515160 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
CAST-243ENST00000515160 ADGRG1Q9Y653 693 aa9.73□□□□□ -0.85
CAST-243ENST00000515160 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
CAST-243ENST00000515160 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
CAST-243ENST00000515160 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
CAST-243ENST00000515160 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
CAST-243ENST00000515160 PSEN2P49810 448 aa9.71□□□□□ -0.86
CAST-243ENST00000515160 ERCC6Q03468 1493 aa9.71□□□□□ -0.86
CAST-243ENST00000515160 PTPN5P54829 565 aa9.7□□□□□ -0.86
CAST-243ENST00000515160 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
CAST-243ENST00000515160 WWC1Q8IX03 1113 aa9.69□□□□□ -0.86
CAST-243ENST00000515160 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
CAST-243ENST00000515160 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
CAST-243ENST00000515160 A0A0G2JS52 829 aa9.67□□□□□ -0.86
CAST-243ENST00000515160 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
CAST-243ENST00000515160 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
CAST-243ENST00000515160 RBM46Q8TBY0 533 aaKnown RBP9.67□□□□□ -0.86
CAST-243ENST00000515160 LIMD1Q9UGP4 676 aa9.67□□□□□ -0.86
CAST-243ENST00000515160 FOSBP53539 338 aa9.66□□□□□ -0.86
CAST-243ENST00000515160 Q6ZNB5 142 aa9.66□□□□□ -0.86
CAST-243ENST00000515160 PRM3Q9NNZ6 103 aa9.66□□□□□ -0.86
CAST-243ENST00000515160 NESP48681 1621 aa9.65□□□□□ -0.86
CAST-243ENST00000515160 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
CAST-243ENST00000515160 THOC2Q8NI27 1593 aaKnown RBP9.64□□□□□ -0.87
CAST-243ENST00000515160 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
CAST-243ENST00000515160 FBXO31Q5XUX0 539 aaPredicted RBP9.64□□□□□ -0.87
CAST-243ENST00000515160 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
CAST-243ENST00000515160 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
CAST-243ENST00000515160 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
CAST-243ENST00000515160 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
CAST-243ENST00000515160 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
CAST-243ENST00000515160 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
CAST-243ENST00000515160 PRSS12P56730 875 aa9.63□□□□□ -0.87
CAST-243ENST00000515160 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
CAST-243ENST00000515160 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
CAST-243ENST00000515160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.62□□□□□ -0.87
CAST-243ENST00000515160 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
CAST-243ENST00000515160 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
CAST-243ENST00000515160 KCNK17Q96T54 332 aa9.62□□□□□ -0.87
CAST-243ENST00000515160 SOCS7O14512 581 aa9.61□□□□□ -0.87
CAST-243ENST00000515160 SPTLC1O15269 473 aa9.61□□□□□ -0.87
CAST-243ENST00000515160 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
CAST-243ENST00000515160 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
CAST-243ENST00000515160 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
CAST-243ENST00000515160 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
CAST-243ENST00000515160 CD46P15529 392 aa9.6□□□□□ -0.87
CAST-243ENST00000515160 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
CAST-243ENST00000515160 ABL2P42684 1182 aa9.59□□□□□ -0.87
CAST-243ENST00000515160 PDE4CQ08493 712 aa9.59□□□□□ -0.87
CAST-243ENST00000515160 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
CAST-243ENST00000515160 THSD4Q6ZMP0 1018 aa9.59□□□□□ -0.87
CAST-243ENST00000515160 SULF1Q8IWU6 871 aa9.59□□□□□ -0.87
CAST-243ENST00000515160 RCCD1A6NED2 376 aa9.58□□□□□ -0.88
CAST-243ENST00000515160 CSPP1Q1MSJ5 1256 aa9.58□□□□□ -0.88
CAST-243ENST00000515160 ADAM33Q9BZ11 813 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms