RNA–Protein interactions for RNA: ENST00000515068.1

CSF1R-207, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-207ENST00000515068 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
CSF1R-207ENST00000515068 USP47Q96K76 1375 aa17.68■□□□□ 0.42
CSF1R-207ENST00000515068 IQGAP1P46940 1657 aa17.68■□□□□ 0.42
CSF1R-207ENST00000515068 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
CSF1R-207ENST00000515068 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
CSF1R-207ENST00000515068 ADAMTSL3P82987 1691 aa17.64■□□□□ 0.42
CSF1R-207ENST00000515068 CHGAP10645 457 aaKnown RBP17.64■□□□□ 0.41
CSF1R-207ENST00000515068 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
CSF1R-207ENST00000515068 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
CSF1R-207ENST00000515068 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
CSF1R-207ENST00000515068 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
CSF1R-207ENST00000515068 PIK3C2GO75747 1445 aa17.63■□□□□ 0.41
CSF1R-207ENST00000515068 RPGRIP1LQ68CZ1 1315 aa17.62■□□□□ 0.41
CSF1R-207ENST00000515068 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
CSF1R-207ENST00000515068 CCDC7Q96M83 1385 aa17.6■□□□□ 0.41
CSF1R-207ENST00000515068 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
CSF1R-207ENST00000515068 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
CSF1R-207ENST00000515068 UBR1Q8IWV7 1749 aa17.6■□□□□ 0.41
CSF1R-207ENST00000515068 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
CSF1R-207ENST00000515068 TNRQ92752 1358 aa17.59■□□□□ 0.41
CSF1R-207ENST00000515068 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
CSF1R-207ENST00000515068 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
CSF1R-207ENST00000515068 KDM5AP29375 1690 aaKnown RBP17.58■□□□□ 0.41
CSF1R-207ENST00000515068 ASXL1Q8IXJ9 1541 aa17.58■□□□□ 0.41
CSF1R-207ENST00000515068 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
CSF1R-207ENST00000515068 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
CSF1R-207ENST00000515068 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
CSF1R-207ENST00000515068 NUTM2DQ5VT03 806 aaPredicted RBP17.57■□□□□ 0.4
CSF1R-207ENST00000515068 MIER1Q8N108 512 aa17.57■□□□□ 0.4
CSF1R-207ENST00000515068 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
CSF1R-207ENST00000515068 TESK2Q96S53 571 aa17.55■□□□□ 0.4
CSF1R-207ENST00000515068 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
CSF1R-207ENST00000515068 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
CSF1R-207ENST00000515068 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
CSF1R-207ENST00000515068 SCAF11Q99590 1463 aaKnown RBP17.54■□□□□ 0.4
CSF1R-207ENST00000515068 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CSF1R-207ENST00000515068 MYO3AQ8NEV4 1616 aa17.53■□□□□ 0.4
CSF1R-207ENST00000515068 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
CSF1R-207ENST00000515068 PTPRMP28827 1452 aa17.51■□□□□ 0.39
CSF1R-207ENST00000515068 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
CSF1R-207ENST00000515068 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
CSF1R-207ENST00000515068 DISP3Q9P2K9 1392 aa17.49■□□□□ 0.39
CSF1R-207ENST00000515068 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
CSF1R-207ENST00000515068 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
CSF1R-207ENST00000515068 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
CSF1R-207ENST00000515068 ARHGAP23Q9P227 1491 aa17.45■□□□□ 0.38
CSF1R-207ENST00000515068 TMEM2Q9UHN6 1383 aa17.44■□□□□ 0.38
CSF1R-207ENST00000515068 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
CSF1R-207ENST00000515068 SLIT1O75093 1534 aa17.43■□□□□ 0.38
CSF1R-207ENST00000515068 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
CSF1R-207ENST00000515068 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
CSF1R-207ENST00000515068 STAG3Q9UJ98 1225 aa17.43■□□□□ 0.38
CSF1R-207ENST00000515068 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
CSF1R-207ENST00000515068 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
CSF1R-207ENST00000515068 LTKP29376 864 aa17.41■□□□□ 0.38
CSF1R-207ENST00000515068 MYOM1P52179 1685 aa17.41■□□□□ 0.38
CSF1R-207ENST00000515068 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
CSF1R-207ENST00000515068 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
CSF1R-207ENST00000515068 MED14O60244 1454 aa17.37■□□□□ 0.37
CSF1R-207ENST00000515068 SBNO2Q9Y2G9 1366 aa17.37■□□□□ 0.37
CSF1R-207ENST00000515068 YTHDC2Q9H6S0 1430 aaKnown RBP17.37■□□□□ 0.37
CSF1R-207ENST00000515068 METP08581 1390 aa17.36■□□□□ 0.37
CSF1R-207ENST00000515068 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
CSF1R-207ENST00000515068 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSF1R-207ENST00000515068 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
CSF1R-207ENST00000515068 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
CSF1R-207ENST00000515068 KNDC1Q76NI1 1749 aa17.34■□□□□ 0.37
CSF1R-207ENST00000515068 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
CSF1R-207ENST00000515068 CENPJQ9HC77 1338 aaPredicted RBP17.34■□□□□ 0.37
CSF1R-207ENST00000515068 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
CSF1R-207ENST00000515068 DLC1Q96QB1 1528 aa17.33■□□□□ 0.37
CSF1R-207ENST00000515068 TMF1P82094 1093 aa17.33■□□□□ 0.36
CSF1R-207ENST00000515068 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
CSF1R-207ENST00000515068 STK26Q9P289 416 aa17.3■□□□□ 0.36
CSF1R-207ENST00000515068 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
CSF1R-207ENST00000515068 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
CSF1R-207ENST00000515068 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
CSF1R-207ENST00000515068 TXNDC2Q86VQ3 553 aa17.29■□□□□ 0.36
CSF1R-207ENST00000515068 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
CSF1R-207ENST00000515068 CPS1P31327 1500 aa17.28■□□□□ 0.36
CSF1R-207ENST00000515068 TECPR2O15040 1411 aa17.28■□□□□ 0.36
CSF1R-207ENST00000515068 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.36
CSF1R-207ENST00000515068 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
CSF1R-207ENST00000515068 ANP32CO43423 234 aa17.26■□□□□ 0.35
CSF1R-207ENST00000515068 HDGFP51858 240 aaKnown RBP17.25■□□□□ 0.35
CSF1R-207ENST00000515068 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
CSF1R-207ENST00000515068 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CSF1R-207ENST00000515068 HSPA2P54652 639 aa17.24■□□□□ 0.35
CSF1R-207ENST00000515068 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
CSF1R-207ENST00000515068 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
CSF1R-207ENST00000515068 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
CSF1R-207ENST00000515068 WAPLQ7Z5K2 1190 aa17.23■□□□□ 0.35
CSF1R-207ENST00000515068 PANK3Q9H999 370 aa17.23■□□□□ 0.35
CSF1R-207ENST00000515068 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.23■□□□□ 0.35
CSF1R-207ENST00000515068 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
CSF1R-207ENST00000515068 SAFB2Q14151 953 aaKnown RBP eCLIP17.22■□□□□ 0.35
CSF1R-207ENST00000515068 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
CSF1R-207ENST00000515068 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
CSF1R-207ENST00000515068 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
CSF1R-207ENST00000515068 FBXO41Q8TF61 875 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms