RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
PROM1-218ENST00000514967 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
PROM1-218ENST00000514967 CCER1Q8TC90 406 aaPredicted RBP23.53■■□□□ 1.36
PROM1-218ENST00000514967 SCAF11Q99590 1463 aaKnown RBP23.53■■□□□ 1.36
PROM1-218ENST00000514967 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.36
PROM1-218ENST00000514967 HSPA2P54652 639 aa23.51■■□□□ 1.35
PROM1-218ENST00000514967 SIN3AQ96ST3 1273 aa23.51■■□□□ 1.35
PROM1-218ENST00000514967 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
PROM1-218ENST00000514967 TXNDC2Q86VQ3 553 aa23.5■■□□□ 1.35
PROM1-218ENST00000514967 LTKP29376 864 aa23.49■■□□□ 1.35
PROM1-218ENST00000514967 MYOM2P54296 1465 aa23.49■■□□□ 1.35
PROM1-218ENST00000514967 IFT172Q9UG01 1749 aa23.48■■□□□ 1.35
PROM1-218ENST00000514967 PPLO60437 1756 aa23.48■■□□□ 1.35
PROM1-218ENST00000514967 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
PROM1-218ENST00000514967 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
PROM1-218ENST00000514967 POLR1AO95602 1720 aaPredicted RBP23.47■■□□□ 1.35
PROM1-218ENST00000514967 STRCQ7RTU9 1775 aa23.47■■□□□ 1.35
PROM1-218ENST00000514967 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
PROM1-218ENST00000514967 NRXN1Q9ULB1 1477 aa23.46■■□□□ 1.35
PROM1-218ENST00000514967 NPHP4O75161 1426 aaPredicted RBP23.42■■□□□ 1.34
PROM1-218ENST00000514967 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
PROM1-218ENST00000514967 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
PROM1-218ENST00000514967 NCKAP5LQ9HCH0 1330 aa23.41■■□□□ 1.34
PROM1-218ENST00000514967 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
PROM1-218ENST00000514967 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
PROM1-218ENST00000514967 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
PROM1-218ENST00000514967 DCAF11Q8TEB1 546 aa23.39■■□□□ 1.33
PROM1-218ENST00000514967 TBX22Q9Y458 520 aa23.39■■□□□ 1.33
PROM1-218ENST00000514967 DIP2AQ14689 1571 aa23.39■■□□□ 1.33
PROM1-218ENST00000514967 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
PROM1-218ENST00000514967 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
PROM1-218ENST00000514967 ADGRF5Q8IZF2 1346 aa23.36■■□□□ 1.33
PROM1-218ENST00000514967 PIK3R4Q99570 1358 aa23.36■■□□□ 1.33
PROM1-218ENST00000514967 ADAMTS13Q76LX8 1427 aa23.35■■□□□ 1.33
PROM1-218ENST00000514967 NRXN3Q9Y4C0 1643 aa23.34■■□□□ 1.33
PROM1-218ENST00000514967 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
PROM1-218ENST00000514967 PRAG1Q86YV5 1406 aa23.32■■□□□ 1.32
PROM1-218ENST00000514967 LAMC1P11047 1609 aa23.31■■□□□ 1.32
PROM1-218ENST00000514967 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
PROM1-218ENST00000514967 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
PROM1-218ENST00000514967 KIAA1210Q9ULL0 1709 aa23.29■■□□□ 1.32
PROM1-218ENST00000514967 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
PROM1-218ENST00000514967 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
PROM1-218ENST00000514967 BCANQ96GW7 911 aa23.24■■□□□ 1.31
PROM1-218ENST00000514967 SLC26A8Q96RN1 970 aa23.24■■□□□ 1.31
PROM1-218ENST00000514967 KCNA6P17658 529 aa23.22■■□□□ 1.31
PROM1-218ENST00000514967 NWD1Q149M9 1564 aa23.21■■□□□ 1.31
PROM1-218ENST00000514967 ADGRB1O14514 1584 aa23.2■■□□□ 1.3
PROM1-218ENST00000514967 METP08581 1390 aa23.2■■□□□ 1.3
PROM1-218ENST00000514967 CFAP70Q5T0N1 1121 aa23.2■■□□□ 1.3
PROM1-218ENST00000514967 CHD2O14647 1828 aaKnown RBP23.19■■□□□ 1.3
PROM1-218ENST00000514967 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
PROM1-218ENST00000514967 TECPR2O15040 1411 aa23.18■■□□□ 1.3
PROM1-218ENST00000514967 ABCC11Q96J66 1382 aa23.18■■□□□ 1.3
PROM1-218ENST00000514967 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
PROM1-218ENST00000514967 SIRT1Q96EB6 747 aa23.18■■□□□ 1.3
PROM1-218ENST00000514967 LRPPRCP42704 1394 aaKnown RBP23.17■■□□□ 1.3
PROM1-218ENST00000514967 TRPM1Q7Z4N2 1603 aa23.17■■□□□ 1.3
PROM1-218ENST00000514967 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
PROM1-218ENST00000514967 NKTRP30414 1462 aaKnown RBP23.17■■□□□ 1.3
PROM1-218ENST00000514967 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
PROM1-218ENST00000514967 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
PROM1-218ENST00000514967 CPS1P31327 1500 aa23.15■■□□□ 1.3
PROM1-218ENST00000514967 XRN1Q8IZH2 1706 aaKnown RBP23.15■■□□□ 1.3
PROM1-218ENST00000514967 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
PROM1-218ENST00000514967 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
PROM1-218ENST00000514967 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.29
PROM1-218ENST00000514967 AMOTL2Q9Y2J4 779 aa23.13■■□□□ 1.29
PROM1-218ENST00000514967 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
PROM1-218ENST00000514967 LTBP4Q8N2S1 1624 aa23.11■■□□□ 1.29
PROM1-218ENST00000514967 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
PROM1-218ENST00000514967 FAM135BQ49AJ0 1406 aa23.11■■□□□ 1.29
PROM1-218ENST00000514967 ZEB1P37275 1124 aaPredicted RBP23.11■■□□□ 1.29
PROM1-218ENST00000514967 ZNF335Q9H4Z2 1342 aaPredicted RBP23.1■■□□□ 1.29
PROM1-218ENST00000514967 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
PROM1-218ENST00000514967 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
PROM1-218ENST00000514967 ROCK2O75116 1388 aaKnown RBP23.09■■□□□ 1.29
PROM1-218ENST00000514967 STRCP1A6NGW2 1772 aa23.08■■□□□ 1.29
PROM1-218ENST00000514967 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
PROM1-218ENST00000514967 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
PROM1-218ENST00000514967 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
PROM1-218ENST00000514967 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
PROM1-218ENST00000514967 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
PROM1-218ENST00000514967 PROSER2Q86WR7 435 aaPredicted RBP23■■□□□ 1.27
PROM1-218ENST00000514967 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
PROM1-218ENST00000514967 STK26Q9P289 416 aa22.98■■□□□ 1.27
PROM1-218ENST00000514967 ARHGEF28Q8N1W1 1705 aaKnown RBP22.98■■□□□ 1.27
PROM1-218ENST00000514967 TMEM94Q12767 1356 aa22.98■■□□□ 1.27
PROM1-218ENST00000514967 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
PROM1-218ENST00000514967 TRAK1Q9UPV9 953 aa22.97■■□□□ 1.27
PROM1-218ENST00000514967 SBNO2Q9Y2G9 1366 aa22.96■■□□□ 1.27
PROM1-218ENST00000514967 DCCP43146 1447 aa22.95■■□□□ 1.26
PROM1-218ENST00000514967 ADGRL3Q9HAR2 1447 aa22.94■■□□□ 1.26
PROM1-218ENST00000514967 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
PROM1-218ENST00000514967 C19orf44Q9H6X5 657 aa22.94■■□□□ 1.26
PROM1-218ENST00000514967 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
PROM1-218ENST00000514967 CENPJQ9HC77 1338 aaPredicted RBP22.92■■□□□ 1.26
PROM1-218ENST00000514967 POGKQ9P215 609 aa22.92■■□□□ 1.26
PROM1-218ENST00000514967 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
PROM1-218ENST00000514967 CERKQ8TCT0 537 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms