RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
CLIP1-205ENST00000514271 WASHC2CQ9Y4E1 1318 aa10.38□□□□□ -0.75
CLIP1-205ENST00000514271 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
CLIP1-205ENST00000514271 PIK3C2BO00750 1634 aa10.38□□□□□ -0.75
CLIP1-205ENST00000514271 A2ML1A8K2U0 1454 aa10.38□□□□□ -0.75
CLIP1-205ENST00000514271 INSRP06213 1382 aa10.38□□□□□ -0.75
CLIP1-205ENST00000514271 PLA2R1Q13018 1463 aa10.37□□□□□ -0.75
CLIP1-205ENST00000514271 NOS1P29475 1434 aa10.37□□□□□ -0.75
CLIP1-205ENST00000514271 LRPPRCP42704 1394 aaKnown RBP10.37□□□□□ -0.75
CLIP1-205ENST00000514271 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
CLIP1-205ENST00000514271 TRPM2O94759 1503 aa10.36□□□□□ -0.75
CLIP1-205ENST00000514271 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-205ENST00000514271 BCANQ96GW7 911 aa10.35□□□□□ -0.75
CLIP1-205ENST00000514271 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
CLIP1-205ENST00000514271 TNRQ92752 1358 aa10.35□□□□□ -0.75
CLIP1-205ENST00000514271 PTPRTO14522 1441 aa10.35□□□□□ -0.75
CLIP1-205ENST00000514271 MYOM1P52179 1685 aa10.35□□□□□ -0.75
CLIP1-205ENST00000514271 GGT6Q6P531 493 aa10.35□□□□□ -0.75
CLIP1-205ENST00000514271 SIN3AQ96ST3 1273 aa10.34□□□□□ -0.75
CLIP1-205ENST00000514271 NUP155O75694 1391 aa10.34□□□□□ -0.75
CLIP1-205ENST00000514271 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
CLIP1-205ENST00000514271 SLC52A1Q9NWF4 448 aa10.34□□□□□ -0.75
CLIP1-205ENST00000514271 KIF1BO60333 1816 aa10.33□□□□□ -0.76
CLIP1-205ENST00000514271 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
CLIP1-205ENST00000514271 RALGAPBQ86X10 1494 aa10.32□□□□□ -0.76
CLIP1-205ENST00000514271 IQGAP1P46940 1657 aa10.32□□□□□ -0.76
CLIP1-205ENST00000514271 ZBED9Q6R2W3 1325 aa10.31□□□□□ -0.76
CLIP1-205ENST00000514271 SYNMO15061 1565 aa10.31□□□□□ -0.76
CLIP1-205ENST00000514271 CCDC7Q96M83 1385 aa10.31□□□□□ -0.76
CLIP1-205ENST00000514271 SLIT1O75093 1534 aa10.31□□□□□ -0.76
CLIP1-205ENST00000514271 FKBP8Q14318 412 aa10.31□□□□□ -0.76
CLIP1-205ENST00000514271 MLECQ14165 292 aa10.3□□□□□ -0.76
CLIP1-205ENST00000514271 LMTK3Q96Q04 1460 aa10.3□□□□□ -0.76
CLIP1-205ENST00000514271 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
CLIP1-205ENST00000514271 STAC3Q96MF2 364 aa10.3□□□□□ -0.76
CLIP1-205ENST00000514271 UGGT1Q9NYU2 1555 aa10.29□□□□□ -0.76
CLIP1-205ENST00000514271 ARHGAP23Q9P227 1491 aa10.29□□□□□ -0.76
CLIP1-205ENST00000514271 C11orf95C9JLR9 678 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-205ENST00000514271 ITGAEP38570 1179 aa10.29□□□□□ -0.76
CLIP1-205ENST00000514271 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
CLIP1-205ENST00000514271 DIP2AQ14689 1571 aa10.28□□□□□ -0.76
CLIP1-205ENST00000514271 TMEM131LA2VDJ0 1609 aa10.27□□□□□ -0.76
CLIP1-205ENST00000514271 PKD2Q13563 968 aa10.27□□□□□ -0.76
CLIP1-205ENST00000514271 DMRT2Q9Y5R5 561 aa10.27□□□□□ -0.76
CLIP1-205ENST00000514271 MED14O60244 1454 aa10.27□□□□□ -0.77
CLIP1-205ENST00000514271 IFT172Q9UG01 1749 aa10.26□□□□□ -0.77
CLIP1-205ENST00000514271 CCDC184Q52MB2 194 aa10.26□□□□□ -0.77
CLIP1-205ENST00000514271 THEMISQ8N1K5 641 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-205ENST00000514271 RPGRIP1LQ68CZ1 1315 aa10.26□□□□□ -0.77
CLIP1-205ENST00000514271 CLTCL1P53675 1640 aa10.25□□□□□ -0.77
CLIP1-205ENST00000514271 DDX10Q13206 875 aaKnown RBP10.25□□□□□ -0.77
CLIP1-205ENST00000514271 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLIP1-205ENST00000514271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.771e-7■□□□□ 10.1
CLIP1-205ENST00000514271 ZFYVE9O95405 1425 aa10.25□□□□□ -0.77
CLIP1-205ENST00000514271 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-205ENST00000514271 TRIM52Q96A61 297 aa10.24□□□□□ -0.77
CLIP1-205ENST00000514271 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
CLIP1-205ENST00000514271 MPHOSPH9Q99550 1183 aa10.23□□□□□ -0.77
CLIP1-205ENST00000514271 BLMP54132 1417 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-205ENST00000514271 KIAA1210Q9ULL0 1709 aa10.23□□□□□ -0.77
CLIP1-205ENST00000514271 CCDC144AA2RUR9 1427 aa10.23□□□□□ -0.77
CLIP1-205ENST00000514271 IQSEC2Q5JU85 1478 aa10.22□□□□□ -0.77
CLIP1-205ENST00000514271 PPLO60437 1756 aa10.22□□□□□ -0.77
CLIP1-205ENST00000514271 SCAF11Q99590 1463 aaKnown RBP10.21□□□□□ -0.77
CLIP1-205ENST00000514271 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-205ENST00000514271 MYOM2P54296 1465 aa10.21□□□□□ -0.78
CLIP1-205ENST00000514271 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
CLIP1-205ENST00000514271 STRCQ7RTU9 1775 aa10.2□□□□□ -0.78
CLIP1-205ENST00000514271 TMEM2Q9UHN6 1383 aa10.2□□□□□ -0.78
CLIP1-205ENST00000514271 SETBP1Q9Y6X0 1596 aa10.2□□□□□ -0.78
CLIP1-205ENST00000514271 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
CLIP1-205ENST00000514271 PPP4R2Q9NY27 417 aa10.2□□□□□ -0.78
CLIP1-205ENST00000514271 MYO5BQ9ULV0 1848 aa10.19□□□□□ -0.78
CLIP1-205ENST00000514271 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
CLIP1-205ENST00000514271 SHPRHQ149N8 1683 aa10.19□□□□□ -0.78
CLIP1-205ENST00000514271 CFAP65Q6ZU64 1925 aaKnown RBP10.18□□□□□ -0.78
CLIP1-205ENST00000514271 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
CLIP1-205ENST00000514271 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
CLIP1-205ENST00000514271 PLEKHG1Q9ULL1 1385 aa10.18□□□□□ -0.78
CLIP1-205ENST00000514271 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
CLIP1-205ENST00000514271 CPS1P31327 1500 aa10.17□□□□□ -0.78
CLIP1-205ENST00000514271 NWD1Q149M9 1564 aa10.17□□□□□ -0.78
CLIP1-205ENST00000514271 CEBPAP49715 358 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-205ENST00000514271 RIMS2Q9UQ26 1411 aa10.17□□□□□ -0.78
CLIP1-205ENST00000514271 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
CLIP1-205ENST00000514271 NPHP4O75161 1426 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-205ENST00000514271 KTN1Q86UP2 1357 aaKnown RBP10.16□□□□□ -0.78
CLIP1-205ENST00000514271 NBPF8Q3BBV2 869 aa10.16□□□□□ -0.78
CLIP1-205ENST00000514271 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-205ENST00000514271 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
CLIP1-205ENST00000514271 HSPA5P11021 654 aaKnown RBP10.16□□□□□ -0.78
CLIP1-205ENST00000514271 KIF7Q2M1P5 1343 aa10.15□□□□□ -0.78
CLIP1-205ENST00000514271 IDI1Q13907 227 aa10.15□□□□□ -0.78
CLIP1-205ENST00000514271 NRXN1Q9ULB1 1477 aa10.15□□□□□ -0.78
CLIP1-205ENST00000514271 KNDC1Q76NI1 1749 aa10.14□□□□□ -0.79
CLIP1-205ENST00000514271 NCOA3Q9Y6Q9 1424 aa10.14□□□□□ -0.79
CLIP1-205ENST00000514271 NKTRP30414 1462 aaKnown RBP10.14□□□□□ -0.79
CLIP1-205ENST00000514271 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
CLIP1-205ENST00000514271 PARD3Q8TEW0 1356 aa10.14□□□□□ -0.79
CLIP1-205ENST00000514271 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms