RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 UNC13BO14795 1591 aa17.66■□□□□ 0.42
SMAD1-212ENST00000514168 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
SMAD1-212ENST00000514168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMAD1-212ENST00000514168 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
SMAD1-212ENST00000514168 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
SMAD1-212ENST00000514168 ADGRB3O60242 1522 aa17.65■□□□□ 0.42
SMAD1-212ENST00000514168 TMEM94Q12767 1356 aa17.65■□□□□ 0.42
SMAD1-212ENST00000514168 ROBO1Q9Y6N7 1651 aa17.64■□□□□ 0.42
SMAD1-212ENST00000514168 HRCP23327 699 aa17.64■□□□□ 0.41
SMAD1-212ENST00000514168 KANK1Q14678 1352 aa17.63■□□□□ 0.41
SMAD1-212ENST00000514168 KCNA6P17658 529 aa17.62■□□□□ 0.41
SMAD1-212ENST00000514168 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
SMAD1-212ENST00000514168 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
SMAD1-212ENST00000514168 ZFYVE9O95405 1425 aa17.6■□□□□ 0.41
SMAD1-212ENST00000514168 NKTRP30414 1462 aaKnown RBP17.6■□□□□ 0.41
SMAD1-212ENST00000514168 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
SMAD1-212ENST00000514168 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
SMAD1-212ENST00000514168 NUP155O75694 1391 aa17.58■□□□□ 0.4
SMAD1-212ENST00000514168 RBM33Q96EV2 1170 aaKnown RBP17.58■□□□□ 0.4
SMAD1-212ENST00000514168 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.4
SMAD1-212ENST00000514168 RPRD2Q5VT52 1461 aaKnown RBP17.57■□□□□ 0.4
SMAD1-212ENST00000514168 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
SMAD1-212ENST00000514168 POTEAQ6S8J7 498 aa17.56■□□□□ 0.4
SMAD1-212ENST00000514168 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
SMAD1-212ENST00000514168 SLC52A1Q9NWF4 448 aa17.55■□□□□ 0.4
SMAD1-212ENST00000514168 PLEKHG1Q9ULL1 1385 aa17.53■□□□□ 0.4
SMAD1-212ENST00000514168 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
SMAD1-212ENST00000514168 E9PCH4 1651 aa17.52■□□□□ 0.39
SMAD1-212ENST00000514168 COL16A1Q07092 1604 aaPredicted RBP17.51■□□□□ 0.39
SMAD1-212ENST00000514168 RIMS2Q9UQ26 1411 aa17.51■□□□□ 0.39
SMAD1-212ENST00000514168 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
SMAD1-212ENST00000514168 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
SMAD1-212ENST00000514168 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
SMAD1-212ENST00000514168 SETD1AO15047 1707 aaKnown RBP17.49■□□□□ 0.39
SMAD1-212ENST00000514168 MSH6P52701 1360 aa17.48■□□□□ 0.39
SMAD1-212ENST00000514168 SLAIN2Q9P270 581 aa17.47■□□□□ 0.39
SMAD1-212ENST00000514168 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.47■□□□□ 0.39
SMAD1-212ENST00000514168 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
SMAD1-212ENST00000514168 TBX22Q9Y458 520 aa17.45■□□□□ 0.38
SMAD1-212ENST00000514168 LRP6O75581 1613 aa17.44■□□□□ 0.38
SMAD1-212ENST00000514168 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
SMAD1-212ENST00000514168 JCADQ9P266 1359 aa17.43■□□□□ 0.38
SMAD1-212ENST00000514168 DIP2AQ14689 1571 aa17.43■□□□□ 0.38
SMAD1-212ENST00000514168 AHDC1Q5TGY3 1603 aaPredicted RBP17.43■□□□□ 0.38
SMAD1-212ENST00000514168 SPHKAPQ2M3C7 1700 aa17.42■□□□□ 0.38
SMAD1-212ENST00000514168 PTPRUQ92729 1446 aa17.41■□□□□ 0.38
SMAD1-212ENST00000514168 NRXN3Q9Y4C0 1643 aa17.41■□□□□ 0.38
SMAD1-212ENST00000514168 SHPRHQ149N8 1683 aa17.41■□□□□ 0.38
SMAD1-212ENST00000514168 BCANQ96GW7 911 aa17.4■□□□□ 0.38
SMAD1-212ENST00000514168 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
SMAD1-212ENST00000514168 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
SMAD1-212ENST00000514168 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
SMAD1-212ENST00000514168 FOXD1Q16676 465 aa17.38■□□□□ 0.37
SMAD1-212ENST00000514168 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
SMAD1-212ENST00000514168 HDGFP51858 240 aaKnown RBP17.37■□□□□ 0.37
SMAD1-212ENST00000514168 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMAD1-212ENST00000514168 TRPM2O94759 1503 aa17.36■□□□□ 0.37
SMAD1-212ENST00000514168 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
SMAD1-212ENST00000514168 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
SMAD1-212ENST00000514168 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
SMAD1-212ENST00000514168 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
SMAD1-212ENST00000514168 CCER1Q8TC90 406 aaPredicted RBP17.33■□□□□ 0.36
SMAD1-212ENST00000514168 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
SMAD1-212ENST00000514168 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
SMAD1-212ENST00000514168 CADPS2Q86UW7 1296 aa17.32■□□□□ 0.36
SMAD1-212ENST00000514168 BRINP3Q76B58 766 aa17.31■□□□□ 0.36
SMAD1-212ENST00000514168 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
SMAD1-212ENST00000514168 KIF1BO60333 1816 aa17.31■□□□□ 0.36
SMAD1-212ENST00000514168 DCCP43146 1447 aa17.3■□□□□ 0.36
SMAD1-212ENST00000514168 CLTCL1P53675 1640 aa17.3■□□□□ 0.36
SMAD1-212ENST00000514168 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
SMAD1-212ENST00000514168 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
SMAD1-212ENST00000514168 MST1RQ04912 1400 aa17.29■□□□□ 0.36
SMAD1-212ENST00000514168 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
SMAD1-212ENST00000514168 ATF3P18847 181 aa17.28■□□□□ 0.36
SMAD1-212ENST00000514168 METP08581 1390 aa17.28■□□□□ 0.36
SMAD1-212ENST00000514168 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
SMAD1-212ENST00000514168 NALCNQ8IZF0 1738 aa17.27■□□□□ 0.35
SMAD1-212ENST00000514168 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMAD1-212ENST00000514168 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
SMAD1-212ENST00000514168 ZNF772Q68DY9 489 aaPredicted RBP17.25■□□□□ 0.35
SMAD1-212ENST00000514168 LAMC1P11047 1609 aa17.23■□□□□ 0.35
SMAD1-212ENST00000514168 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
SMAD1-212ENST00000514168 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
SMAD1-212ENST00000514168 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.35
SMAD1-212ENST00000514168 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
SMAD1-212ENST00000514168 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
SMAD1-212ENST00000514168 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
SMAD1-212ENST00000514168 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
SMAD1-212ENST00000514168 AFF2P51816 1311 aa17.18■□□□□ 0.34
SMAD1-212ENST00000514168 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
SMAD1-212ENST00000514168 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
SMAD1-212ENST00000514168 RXRBP28702 533 aa17.17■□□□□ 0.34
SMAD1-212ENST00000514168 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
SMAD1-212ENST00000514168 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
SMAD1-212ENST00000514168 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
SMAD1-212ENST00000514168 RGS12O14924 1447 aa17.15■□□□□ 0.34
SMAD1-212ENST00000514168 C1orf167Q5SNV9 1468 aa17.15■□□□□ 0.34
SMAD1-212ENST00000514168 IFT172Q9UG01 1749 aa17.14■□□□□ 0.33
SMAD1-212ENST00000514168 RGL3Q3MIN7 710 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms