RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
CALCOCO2-222ENST00000514006 SPTLC1O15269 473 aa8.88□□□□□ -0.99
CALCOCO2-222ENST00000514006 RSBN1LQ6PCB5 846 aaPredicted RBP8.88□□□□□ -0.99
CALCOCO2-222ENST00000514006 EYA1Q99502 592 aa8.88□□□□□ -0.99
CALCOCO2-222ENST00000514006 PRM3Q9NNZ6 103 aa8.88□□□□□ -0.99
CALCOCO2-222ENST00000514006 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
CALCOCO2-222ENST00000514006 CSPP1Q1MSJ5 1256 aa8.87□□□□□ -0.99
CALCOCO2-222ENST00000514006 MTMR14Q8NCE2 650 aa8.87□□□□□ -0.99
CALCOCO2-222ENST00000514006 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
CALCOCO2-222ENST00000514006 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
CALCOCO2-222ENST00000514006 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
CALCOCO2-222ENST00000514006 DNAJB2P25686 324 aa8.86□□□□□ -0.99
CALCOCO2-222ENST00000514006 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
CALCOCO2-222ENST00000514006 NECTIN2Q92692 538 aa8.86□□□□□ -0.99
CALCOCO2-222ENST00000514006 MOXD2PA6NHM9 499 aa8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 SOCS7O14512 581 aa8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 COL9A1P20849 921 aa8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
CALCOCO2-222ENST00000514006 GJA5P36382 358 aa8.84□□□□□ -0.99
CALCOCO2-222ENST00000514006 ABL2P42684 1182 aa8.84□□□□□ -0.99
CALCOCO2-222ENST00000514006 POTEGQ6S5H5 508 aa8.84□□□□□ -0.99
CALCOCO2-222ENST00000514006 NPM2Q86SE8 214 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-222ENST00000514006 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
CALCOCO2-222ENST00000514006 TSKSQ9UJT2 592 aa8.84□□□□□ -0.99
CALCOCO2-222ENST00000514006 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-222ENST00000514006 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
CALCOCO2-222ENST00000514006 AP1G2O75843 785 aa8.83□□□□□ -1
CALCOCO2-222ENST00000514006 HOXB3P14651 431 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-222ENST00000514006 QPCTQ16769 361 aa8.83□□□□□ -1
CALCOCO2-222ENST00000514006 GPR153Q6NV75 609 aa8.83□□□□□ -1
CALCOCO2-222ENST00000514006 LHX6Q9UPM6 363 aa8.83□□□□□ -1
CALCOCO2-222ENST00000514006 NUTM2BA6NNL0 878 aaPredicted RBP8.82□□□□□ -1
CALCOCO2-222ENST00000514006 NUTM2EB1AL46 878 aaPredicted RBP8.82□□□□□ -1
CALCOCO2-222ENST00000514006 LILRB3O75022 631 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 NDUFV2P19404 249 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 PTPREP23469 700 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 NUTM2DQ5VT03 806 aaPredicted RBP8.82□□□□□ -1
CALCOCO2-222ENST00000514006 NUTM2AQ8IVF1 878 aaPredicted RBP8.82□□□□□ -1
CALCOCO2-222ENST00000514006 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 TATDN2Q93075 761 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 OTUD5Q96G74 571 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 CALR3Q96L12 384 aaKnown RBP8.82□□□□□ -1
CALCOCO2-222ENST00000514006 TMEM134Q9H6X4 195 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 PNMA3Q9UL41 463 aa8.82□□□□□ -1
CALCOCO2-222ENST00000514006 PACS2Q86VP3 889 aa8.81□□□□□ -1
CALCOCO2-222ENST00000514006 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
CALCOCO2-222ENST00000514006 RDH13Q8NBN7 331 aa8.81□□□□□ -1
CALCOCO2-222ENST00000514006 TRIM6-TRIM34B2RNG4 842 aa8.8□□□□□ -1
CALCOCO2-222ENST00000514006 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
CALCOCO2-222ENST00000514006 PCDHB15Q9Y5E8 787 aa8.8□□□□□ -1
CALCOCO2-222ENST00000514006 C3orf80F5H4A9 247 aa8.79□□□□□ -1
CALCOCO2-222ENST00000514006 USP17L8P0C7I0 530 aa8.79□□□□□ -1
CALCOCO2-222ENST00000514006 RTL5Q5HYW3 569 aaPredicted RBP8.79□□□□□ -1
CALCOCO2-222ENST00000514006 PRPF38BQ5VTL8 546 aaKnown RBP8.79□□□□□ -1
CALCOCO2-222ENST00000514006 RETREG2Q8NC44 543 aa8.79□□□□□ -1
CALCOCO2-222ENST00000514006 KDM4AO75164 1064 aa8.78□□□□□ -1
CALCOCO2-222ENST00000514006 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
CALCOCO2-222ENST00000514006 GLMNQ92990 594 aa8.78□□□□□ -1
CALCOCO2-222ENST00000514006 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
CALCOCO2-222ENST00000514006 USP46P62068 366 aa8.77□□□□□ -1.01
CALCOCO2-222ENST00000514006 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
CALCOCO2-222ENST00000514006 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
CALCOCO2-222ENST00000514006 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
CALCOCO2-222ENST00000514006 ZBTB3Q9H5J0 574 aa8.77□□□□□ -1.01
CALCOCO2-222ENST00000514006 NDUFB9Q9Y6M9 179 aa8.76□□□□□ -1.01
CALCOCO2-222ENST00000514006 ACIN1Q9UKV3 1341 aaKnown RBP8.76□□□□□ -1.01
CALCOCO2-222ENST00000514006 MAMSTRQ6ZN01 415 aa8.75□□□□□ -1.01
CALCOCO2-222ENST00000514006 SMAPO00193 183 aa8.74□□□□□ -1.01
CALCOCO2-222ENST00000514006 FDX1P10109 184 aa8.74□□□□□ -1.01
CALCOCO2-222ENST00000514006 HOXA2O43364 376 aa8.73□□□□□ -1.01
CALCOCO2-222ENST00000514006 GCGRP47871 477 aa8.73□□□□□ -1.01
CALCOCO2-222ENST00000514006 PDE4CQ08493 712 aa8.73□□□□□ -1.01
CALCOCO2-222ENST00000514006 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
CALCOCO2-222ENST00000514006 GJD4Q96KN9 370 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-222ENST00000514006 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
CALCOCO2-222ENST00000514006 WASHC4Q2M389 1173 aa8.71□□□□□ -1.02
CALCOCO2-222ENST00000514006 POTEJP0CG39 1038 aa8.7□□□□□ -1.02
CALCOCO2-222ENST00000514006 IRF5Q13568 498 aa8.7□□□□□ -1.02
CALCOCO2-222ENST00000514006 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
CALCOCO2-222ENST00000514006 HELBQ8NG08 1087 aaPredicted RBP8.7□□□□□ -1.02
CALCOCO2-222ENST00000514006 KCNK17Q96T54 332 aa8.7□□□□□ -1.02
CALCOCO2-222ENST00000514006 SCUBE2Q9NQ36 999 aa8.7□□□□□ -1.02
CALCOCO2-222ENST00000514006 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
CALCOCO2-222ENST00000514006 MTMR2Q13614 643 aa8.69□□□□□ -1.02
CALCOCO2-222ENST00000514006 PCDHGC3Q9UN70 934 aa8.69□□□□□ -1.02
CALCOCO2-222ENST00000514006 GUCA2AQ02747 115 aa8.68□□□□□ -1.02
CALCOCO2-222ENST00000514006 TSC1Q92574 1164 aa8.68□□□□□ -1.02
CALCOCO2-222ENST00000514006 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
CALCOCO2-222ENST00000514006 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
CALCOCO2-222ENST00000514006 SLC10A3P09131 477 aa8.67□□□□□ -1.02
CALCOCO2-222ENST00000514006 SWT1Q5T5J6 900 aaKnown RBP8.67□□□□□ -1.02
CALCOCO2-222ENST00000514006 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
CALCOCO2-222ENST00000514006 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
CALCOCO2-222ENST00000514006 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
CALCOCO2-222ENST00000514006 HDGFP51858 240 aaKnown RBP8.66□□□□□ -1.02
CALCOCO2-222ENST00000514006 ADAMTS19Q8TE59 1207 aa8.66□□□□□ -1.02
CALCOCO2-222ENST00000514006 HLA-CQ95604 372 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms