RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
RAPGEF2-212ENST00000513816 CLTCL1P53675 1640 aa10.47□□□□□ -0.73
RAPGEF2-212ENST00000513816 PLEKHG1Q9ULL1 1385 aa10.47□□□□□ -0.73
RAPGEF2-212ENST00000513816 ZFYVE9O95405 1425 aa10.47□□□□□ -0.73
RAPGEF2-212ENST00000513816 CPS1P31327 1500 aa10.46□□□□□ -0.73
RAPGEF2-212ENST00000513816 PPP1R15AO75807 674 aaPredicted RBP10.46□□□□□ -0.73
RAPGEF2-212ENST00000513816 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.74
RAPGEF2-212ENST00000513816 PIK3R4Q99570 1358 aa10.46□□□□□ -0.74
RAPGEF2-212ENST00000513816 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
RAPGEF2-212ENST00000513816 ANKRD30BQ9BXX2 1392 aa10.45□□□□□ -0.74
RAPGEF2-212ENST00000513816 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
RAPGEF2-212ENST00000513816 ZNF326Q5BKZ1 582 aaKnown RBP10.43□□□□□ -0.74
RAPGEF2-212ENST00000513816 MYO5BQ9ULV0 1848 aa10.43□□□□□ -0.74
RAPGEF2-212ENST00000513816 TBX22Q9Y458 520 aa10.42□□□□□ -0.74
RAPGEF2-212ENST00000513816 SETBP1Q9Y6X0 1596 aa10.42□□□□□ -0.74
RAPGEF2-212ENST00000513816 NEXMIFQ5QGS0 1516 aa10.41□□□□□ -0.74
RAPGEF2-212ENST00000513816 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
RAPGEF2-212ENST00000513816 NKTRP30414 1462 aaKnown RBP10.41□□□□□ -0.74
RAPGEF2-212ENST00000513816 LTKP29376 864 aa10.4□□□□□ -0.74
RAPGEF2-212ENST00000513816 MYOM2P54296 1465 aa10.4□□□□□ -0.74
RAPGEF2-212ENST00000513816 PPLO60437 1756 aa10.4□□□□□ -0.75
RAPGEF2-212ENST00000513816 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
RAPGEF2-212ENST00000513816 NCOA3Q9Y6Q9 1424 aa10.39□□□□□ -0.75
RAPGEF2-212ENST00000513816 BCANQ96GW7 911 aa10.39□□□□□ -0.75
RAPGEF2-212ENST00000513816 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
RAPGEF2-212ENST00000513816 LAMC1P11047 1609 aa10.38□□□□□ -0.75
RAPGEF2-212ENST00000513816 KCNA6P17658 529 aa10.38□□□□□ -0.75
RAPGEF2-212ENST00000513816 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
RAPGEF2-212ENST00000513816 CERKQ8TCT0 537 aa10.38□□□□□ -0.75
RAPGEF2-212ENST00000513816 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
RAPGEF2-212ENST00000513816 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
RAPGEF2-212ENST00000513816 ADAMTS13Q76LX8 1427 aa10.36□□□□□ -0.75
RAPGEF2-212ENST00000513816 FOXD1Q16676 465 aa10.35□□□□□ -0.75
RAPGEF2-212ENST00000513816 CHD2O14647 1828 aaKnown RBP10.34□□□□□ -0.75
RAPGEF2-212ENST00000513816 NRXN1Q9ULB1 1477 aa10.34□□□□□ -0.75
RAPGEF2-212ENST00000513816 DHX57Q6P158 1386 aaKnown RBP10.34□□□□□ -0.75
RAPGEF2-212ENST00000513816 ZNF335Q9H4Z2 1342 aaPredicted RBP10.34□□□□□ -0.75
RAPGEF2-212ENST00000513816 NRXN3Q9Y4C0 1643 aa10.33□□□□□ -0.76
RAPGEF2-212ENST00000513816 FBXO41Q8TF61 875 aa10.32□□□□□ -0.76
RAPGEF2-212ENST00000513816 ALKQ9UM73 1620 aa10.32□□□□□ -0.76
RAPGEF2-212ENST00000513816 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
RAPGEF2-212ENST00000513816 LRRC7Q96NW7 1537 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 XRN1Q8IZH2 1706 aaKnown RBP10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 SLC26A8Q96RN1 970 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 PTCH1Q13635 1447 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 KIAA1210Q9ULL0 1709 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 RGL3Q3MIN7 710 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 SIRT1Q96EB6 747 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 TIMELESSQ9UNS1 1208 aa10.31□□□□□ -0.76
RAPGEF2-212ENST00000513816 TOM1O60784 492 aa10.3□□□□□ -0.76
RAPGEF2-212ENST00000513816 PROSER2Q86WR7 435 aaPredicted RBP10.3□□□□□ -0.76
RAPGEF2-212ENST00000513816 KNDC1Q76NI1 1749 aa10.3□□□□□ -0.76
RAPGEF2-212ENST00000513816 DCCP43146 1447 aa10.29□□□□□ -0.76
RAPGEF2-212ENST00000513816 SETD1AO15047 1707 aaKnown RBP10.29□□□□□ -0.76
RAPGEF2-212ENST00000513816 LRPPRCP42704 1394 aaKnown RBP10.29□□□□□ -0.76
RAPGEF2-212ENST00000513816 MSH6P52701 1360 aa10.29□□□□□ -0.76
RAPGEF2-212ENST00000513816 TECPR2O15040 1411 aa10.29□□□□□ -0.76
RAPGEF2-212ENST00000513816 C14orf93Q9H972 538 aaKnown RBP10.29□□□□□ -0.76
RAPGEF2-212ENST00000513816 AMOTL2Q9Y2J4 779 aa10.28□□□□□ -0.76
RAPGEF2-212ENST00000513816 ABCC11Q96J66 1382 aa10.28□□□□□ -0.76
RAPGEF2-212ENST00000513816 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.76
RAPGEF2-212ENST00000513816 DLC1Q96QB1 1528 aa10.27□□□□□ -0.77
RAPGEF2-212ENST00000513816 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
RAPGEF2-212ENST00000513816 ADGRF5Q8IZF2 1346 aa10.27□□□□□ -0.77
RAPGEF2-212ENST00000513816 FAM135BQ49AJ0 1406 aa10.27□□□□□ -0.77
RAPGEF2-212ENST00000513816 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.77
RAPGEF2-212ENST00000513816 TMEM94Q12767 1356 aa10.26□□□□□ -0.77
RAPGEF2-212ENST00000513816 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
RAPGEF2-212ENST00000513816 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
RAPGEF2-212ENST00000513816 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
RAPGEF2-212ENST00000513816 METP08581 1390 aa10.25□□□□□ -0.77
RAPGEF2-212ENST00000513816 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
RAPGEF2-212ENST00000513816 C19orf44Q9H6X5 657 aa10.25□□□□□ -0.77
RAPGEF2-212ENST00000513816 PTPRUQ92729 1446 aa10.24□□□□□ -0.77
RAPGEF2-212ENST00000513816 YTHDC2Q9H6S0 1430 aaKnown RBP10.24□□□□□ -0.77
RAPGEF2-212ENST00000513816 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
RAPGEF2-212ENST00000513816 EIF3AQ14152 1382 aaKnown RBP10.24□□□□□ -0.77
RAPGEF2-212ENST00000513816 UBAP1LF5GYI3 381 aa10.23□□□□□ -0.77
RAPGEF2-212ENST00000513816 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
RAPGEF2-212ENST00000513816 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
RAPGEF2-212ENST00000513816 ATF3P18847 181 aa10.22□□□□□ -0.77
RAPGEF2-212ENST00000513816 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
RAPGEF2-212ENST00000513816 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
RAPGEF2-212ENST00000513816 ASXL1Q8IXJ9 1541 aa10.21□□□□□ -0.77
RAPGEF2-212ENST00000513816 ADGRB1O14514 1584 aa10.21□□□□□ -0.78
RAPGEF2-212ENST00000513816 CDC42BPGQ6DT37 1551 aa10.21□□□□□ -0.78
RAPGEF2-212ENST00000513816 CFAP70Q5T0N1 1121 aa10.2□□□□□ -0.78
RAPGEF2-212ENST00000513816 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
RAPGEF2-212ENST00000513816 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.19□□□□□ -0.78
RAPGEF2-212ENST00000513816 SIN3AQ96ST3 1273 aa10.19□□□□□ -0.78
RAPGEF2-212ENST00000513816 ROBO2Q9HCK4 1378 aa10.18□□□□□ -0.78
RAPGEF2-212ENST00000513816 ADGRB2O60241 1585 aa10.18□□□□□ -0.78
RAPGEF2-212ENST00000513816 TRPM1Q7Z4N2 1603 aa10.18□□□□□ -0.78
RAPGEF2-212ENST00000513816 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF2-212ENST00000513816 POGKQ9P215 609 aa10.18□□□□□ -0.78
RAPGEF2-212ENST00000513816 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
RAPGEF2-212ENST00000513816 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
RAPGEF2-212ENST00000513816 NALCNQ8IZF0 1738 aa10.17□□□□□ -0.78
RAPGEF2-212ENST00000513816 ANKARQ7Z5J8 1434 aa10.16□□□□□ -0.78
RAPGEF2-212ENST00000513816 SLAIN2Q9P270 581 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms