RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
PTPN20-229ENST00000513756 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.64
PTPN20-229ENST00000513756 COL16A1Q07092 1604 aaPredicted RBP19.02■□□□□ 0.64
PTPN20-229ENST00000513756 ABCC5O15440 1437 aa19.01■□□□□ 0.63
PTPN20-229ENST00000513756 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
PTPN20-229ENST00000513756 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
PTPN20-229ENST00000513756 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
PTPN20-229ENST00000513756 NOS1P29475 1434 aa19■□□□□ 0.63
PTPN20-229ENST00000513756 RXRBP28702 533 aa19■□□□□ 0.63
PTPN20-229ENST00000513756 LRP6O75581 1613 aa19■□□□□ 0.63
PTPN20-229ENST00000513756 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
PTPN20-229ENST00000513756 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
PTPN20-229ENST00000513756 C14orf37Q86TY3 774 aa18.99■□□□□ 0.63
PTPN20-229ENST00000513756 CHD2O14647 1828 aaKnown RBP18.99■□□□□ 0.63
PTPN20-229ENST00000513756 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
PTPN20-229ENST00000513756 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
PTPN20-229ENST00000513756 ATF3P18847 181 aa18.96■□□□□ 0.63
PTPN20-229ENST00000513756 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
PTPN20-229ENST00000513756 DAPK1P53355 1430 aa18.96■□□□□ 0.63
PTPN20-229ENST00000513756 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
PTPN20-229ENST00000513756 C19orf44Q9H6X5 657 aa18.95■□□□□ 0.62
PTPN20-229ENST00000513756 AHDC1Q5TGY3 1603 aaPredicted RBP18.95■□□□□ 0.62
PTPN20-229ENST00000513756 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
PTPN20-229ENST00000513756 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
PTPN20-229ENST00000513756 ZFYVE9O95405 1425 aa18.94■□□□□ 0.62
PTPN20-229ENST00000513756 RIMS2Q9UQ26 1411 aa18.93■□□□□ 0.62
PTPN20-229ENST00000513756 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTPN20-229ENST00000513756 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
PTPN20-229ENST00000513756 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
PTPN20-229ENST00000513756 NUTM2BA6NNL0 878 aaPredicted RBP18.9■□□□□ 0.62
PTPN20-229ENST00000513756 NUTM2EB1AL46 878 aaPredicted RBP18.9■□□□□ 0.62
PTPN20-229ENST00000513756 NUTM2AQ8IVF1 878 aaPredicted RBP18.9■□□□□ 0.62
PTPN20-229ENST00000513756 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.9■□□□□ 0.62
PTPN20-229ENST00000513756 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
PTPN20-229ENST00000513756 AFF2P51816 1311 aa18.88■□□□□ 0.61
PTPN20-229ENST00000513756 MYO5BQ9ULV0 1848 aa18.87■□□□□ 0.61
PTPN20-229ENST00000513756 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
PTPN20-229ENST00000513756 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
PTPN20-229ENST00000513756 APLP2Q06481 763 aa18.86■□□□□ 0.61
PTPN20-229ENST00000513756 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
PTPN20-229ENST00000513756 TMEM131LA2VDJ0 1609 aa18.85■□□□□ 0.61
PTPN20-229ENST00000513756 CHGAP10645 457 aaKnown RBP18.85■□□□□ 0.61
PTPN20-229ENST00000513756 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
PTPN20-229ENST00000513756 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.61
PTPN20-229ENST00000513756 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
PTPN20-229ENST00000513756 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
PTPN20-229ENST00000513756 QTRT2Q9H974 415 aaKnown RBP18.82■□□□□ 0.6
PTPN20-229ENST00000513756 AMOTL2Q9Y2J4 779 aa18.82■□□□□ 0.6
PTPN20-229ENST00000513756 DCCP43146 1447 aa18.82■□□□□ 0.6
PTPN20-229ENST00000513756 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
PTPN20-229ENST00000513756 FOXD1Q16676 465 aa18.81■□□□□ 0.6
PTPN20-229ENST00000513756 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
PTPN20-229ENST00000513756 TRPM2O94759 1503 aa18.8■□□□□ 0.6
PTPN20-229ENST00000513756 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
PTPN20-229ENST00000513756 C8orf37Q96NL8 207 aa18.8■□□□□ 0.6
PTPN20-229ENST00000513756 ANKRD50Q9ULJ7 1429 aa18.8■□□□□ 0.6
PTPN20-229ENST00000513756 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
PTPN20-229ENST00000513756 RGS12O14924 1447 aa18.78■□□□□ 0.6
PTPN20-229ENST00000513756 NGLY1Q96IV0 654 aa18.77■□□□□ 0.6
PTPN20-229ENST00000513756 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
PTPN20-229ENST00000513756 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
PTPN20-229ENST00000513756 ATAD2Q6PL18 1390 aa18.74■□□□□ 0.59
PTPN20-229ENST00000513756 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
PTPN20-229ENST00000513756 MST1RQ04912 1400 aa18.74■□□□□ 0.59
PTPN20-229ENST00000513756 PNPLA6Q8IY17 1366 aa18.71■□□□□ 0.59
PTPN20-229ENST00000513756 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
PTPN20-229ENST00000513756 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
PTPN20-229ENST00000513756 UNC13BO14795 1591 aa18.7■□□□□ 0.58
PTPN20-229ENST00000513756 E9PCH4 1651 aa18.69■□□□□ 0.58
PTPN20-229ENST00000513756 ADAMTS2O95450 1211 aa18.68■□□□□ 0.58
PTPN20-229ENST00000513756 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
PTPN20-229ENST00000513756 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
PTPN20-229ENST00000513756 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
PTPN20-229ENST00000513756 USP21Q9UK80 565 aa18.66■□□□□ 0.58
PTPN20-229ENST00000513756 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
PTPN20-229ENST00000513756 SETBP1Q9Y6X0 1596 aa18.65■□□□□ 0.58
PTPN20-229ENST00000513756 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
PTPN20-229ENST00000513756 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
PTPN20-229ENST00000513756 METP08581 1390 aa18.62■□□□□ 0.57
PTPN20-229ENST00000513756 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
PTPN20-229ENST00000513756 NRXN3Q9Y4C0 1643 aa18.62■□□□□ 0.57
PTPN20-229ENST00000513756 PTCH1Q13635 1447 aa18.61■□□□□ 0.57
PTPN20-229ENST00000513756 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
PTPN20-229ENST00000513756 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
PTPN20-229ENST00000513756 NUP155O75694 1391 aa18.6■□□□□ 0.57
PTPN20-229ENST00000513756 EP400Q96L91 3159 aa18.59■□□□□ 0.57
PTPN20-229ENST00000513756 ATRNO75882 1429 aa18.58■□□□□ 0.57
PTPN20-229ENST00000513756 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
PTPN20-229ENST00000513756 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
PTPN20-229ENST00000513756 ROCK1Q13464 1354 aa18.57■□□□□ 0.56
PTPN20-229ENST00000513756 LAMC1P11047 1609 aa18.57■□□□□ 0.56
PTPN20-229ENST00000513756 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
PTPN20-229ENST00000513756 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.55
PTPN20-229ENST00000513756 COL22A1Q8NFW1 1626 aaPredicted RBP18.51■□□□□ 0.55
PTPN20-229ENST00000513756 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
PTPN20-229ENST00000513756 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
PTPN20-229ENST00000513756 BCL9LQ86UU0 1499 aa18.48■□□□□ 0.55
PTPN20-229ENST00000513756 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
PTPN20-229ENST00000513756 MYOM2P54296 1465 aa18.47■□□□□ 0.55
PTPN20-229ENST00000513756 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms