RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
PROM1-215ENST00000513448 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
PROM1-215ENST00000513448 CD109Q6YHK3 1445 aa12.5□□□□□ -0.41
PROM1-215ENST00000513448 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
PROM1-215ENST00000513448 SYNMO15061 1565 aa12.49□□□□□ -0.41
PROM1-215ENST00000513448 KIF1BO60333 1816 aa12.49□□□□□ -0.41
PROM1-215ENST00000513448 POGZQ7Z3K3 1410 aa12.49□□□□□ -0.41
PROM1-215ENST00000513448 MAP3K4Q9Y6R4 1608 aa12.49□□□□□ -0.41
PROM1-215ENST00000513448 NEO1Q92859 1461 aa12.47□□□□□ -0.41
PROM1-215ENST00000513448 NRXN1Q9ULB1 1477 aa12.47□□□□□ -0.41
PROM1-215ENST00000513448 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
PROM1-215ENST00000513448 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.41
PROM1-215ENST00000513448 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
PROM1-215ENST00000513448 HECW2Q9P2P5 1572 aa12.46□□□□□ -0.42
PROM1-215ENST00000513448 PPRC1Q5VV67 1664 aaKnown RBP12.46□□□□□ -0.42
PROM1-215ENST00000513448 IFT172Q9UG01 1749 aa12.45□□□□□ -0.42
PROM1-215ENST00000513448 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
PROM1-215ENST00000513448 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
PROM1-215ENST00000513448 CC2D1BQ5T0F9 858 aaKnown RBP12.44□□□□□ -0.42
PROM1-215ENST00000513448 ADGRB3O60242 1522 aa12.43□□□□□ -0.42
PROM1-215ENST00000513448 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
PROM1-215ENST00000513448 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
PROM1-215ENST00000513448 KDM5AP29375 1690 aaKnown RBP12.42□□□□□ -0.42
PROM1-215ENST00000513448 ABCA6Q8N139 1617 aa12.42□□□□□ -0.42
PROM1-215ENST00000513448 MYO3AQ8NEV4 1616 aa12.42□□□□□ -0.42
PROM1-215ENST00000513448 PIK3C2GO75747 1445 aa12.42□□□□□ -0.42
PROM1-215ENST00000513448 FRMPD1Q5SYB0 1578 aa12.42□□□□□ -0.42
PROM1-215ENST00000513448 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
PROM1-215ENST00000513448 NPATQ14207 1427 aa12.41□□□□□ -0.42
PROM1-215ENST00000513448 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
PROM1-215ENST00000513448 B4GALNT3Q6L9W6 998 aa12.4□□□□□ -0.42
PROM1-215ENST00000513448 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
PROM1-215ENST00000513448 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
PROM1-215ENST00000513448 UGGT1Q9NYU2 1555 aa12.4□□□□□ -0.43
PROM1-215ENST00000513448 MYOM1P52179 1685 aa12.39□□□□□ -0.43
PROM1-215ENST00000513448 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
PROM1-215ENST00000513448 ABCC3O15438 1527 aa12.39□□□□□ -0.43
PROM1-215ENST00000513448 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
PROM1-215ENST00000513448 POTEDQ86YR6 584 aa12.38□□□□□ -0.43
PROM1-215ENST00000513448 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
PROM1-215ENST00000513448 ARHGAP31Q2M1Z3 1444 aa12.38□□□□□ -0.43
PROM1-215ENST00000513448 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
PROM1-215ENST00000513448 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
PROM1-215ENST00000513448 C14orf93Q9H972 538 aaKnown RBP12.38□□□□□ -0.43
PROM1-215ENST00000513448 NOS1P29475 1434 aa12.38□□□□□ -0.43
PROM1-215ENST00000513448 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
PROM1-215ENST00000513448 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
PROM1-215ENST00000513448 PPLO60437 1756 aa12.37□□□□□ -0.43
PROM1-215ENST00000513448 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
PROM1-215ENST00000513448 GGT6Q6P531 493 aa12.36□□□□□ -0.43
PROM1-215ENST00000513448 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
PROM1-215ENST00000513448 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
PROM1-215ENST00000513448 CENPJQ9HC77 1338 aaPredicted RBP12.35□□□□□ -0.43
PROM1-215ENST00000513448 ANP32EQ9BTT0 268 aa12.35□□□□□ -0.43
PROM1-215ENST00000513448 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
PROM1-215ENST00000513448 CAMSAP1Q5T5Y3 1602 aa12.35□□□□□ -0.43
PROM1-215ENST00000513448 GLI2P10070 1586 aa12.34□□□□□ -0.43
PROM1-215ENST00000513448 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
PROM1-215ENST00000513448 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.43
PROM1-215ENST00000513448 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.43
PROM1-215ENST00000513448 ADGRB1O14514 1584 aa12.33□□□□□ -0.44
PROM1-215ENST00000513448 SLC52A1Q9NWF4 448 aa12.33□□□□□ -0.44
PROM1-215ENST00000513448 ZFYVE9O95405 1425 aa12.33□□□□□ -0.44
PROM1-215ENST00000513448 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
PROM1-215ENST00000513448 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
PROM1-215ENST00000513448 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
PROM1-215ENST00000513448 RAPGEF3O95398 923 aa12.3□□□□□ -0.44
PROM1-215ENST00000513448 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
PROM1-215ENST00000513448 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
PROM1-215ENST00000513448 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
PROM1-215ENST00000513448 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
PROM1-215ENST00000513448 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
PROM1-215ENST00000513448 NEXMIFQ5QGS0 1516 aa12.28□□□□□ -0.44
PROM1-215ENST00000513448 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
PROM1-215ENST00000513448 SIGLEC1Q9BZZ2 1709 aa12.28□□□□□ -0.44
PROM1-215ENST00000513448 USP32Q8NFA0 1604 aa12.28□□□□□ -0.44
PROM1-215ENST00000513448 QRICH2Q9H0J4 1663 aa12.27□□□□□ -0.44
PROM1-215ENST00000513448 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.44
PROM1-215ENST00000513448 TRAK1Q9UPV9 953 aa12.27□□□□□ -0.45
PROM1-215ENST00000513448 CFAP65Q6ZU64 1925 aaKnown RBP12.26□□□□□ -0.45
PROM1-215ENST00000513448 PLEKHH1Q9ULM0 1364 aa12.26□□□□□ -0.45
PROM1-215ENST00000513448 NINLQ9Y2I6 1382 aa12.26□□□□□ -0.45
PROM1-215ENST00000513448 DUSP27Q5VZP5 1158 aa12.26□□□□□ -0.45
PROM1-215ENST00000513448 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
PROM1-215ENST00000513448 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
PROM1-215ENST00000513448 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
PROM1-215ENST00000513448 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
PROM1-215ENST00000513448 NSD2O96028 1365 aa12.25□□□□□ -0.45
PROM1-215ENST00000513448 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
PROM1-215ENST00000513448 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
PROM1-215ENST00000513448 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
PROM1-215ENST00000513448 REREQ9P2R6 1566 aa12.24□□□□□ -0.45
PROM1-215ENST00000513448 IDI1Q13907 227 aa12.24□□□□□ -0.45
PROM1-215ENST00000513448 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
PROM1-215ENST00000513448 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
PROM1-215ENST00000513448 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
PROM1-215ENST00000513448 E9PSI1 815 aa12.23□□□□□ -0.45
PROM1-215ENST00000513448 MS4A1P11836 297 aa12.23□□□□□ -0.45
PROM1-215ENST00000513448 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
PROM1-215ENST00000513448 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms