RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 ITGAEP38570 1179 aa20.55■□□□□ 0.88
POLR2J3-217ENST00000513438 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-217ENST00000513438 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-217ENST00000513438 ROCK1Q13464 1354 aa20.53■□□□□ 0.88
POLR2J3-217ENST00000513438 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
POLR2J3-217ENST00000513438 RIMS2Q9UQ26 1411 aa20.52■□□□□ 0.87
POLR2J3-217ENST00000513438 UNC13BO14795 1591 aa20.51■□□□□ 0.87
POLR2J3-217ENST00000513438 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
POLR2J3-217ENST00000513438 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
POLR2J3-217ENST00000513438 ZFYVE9O95405 1425 aa20.5■□□□□ 0.87
POLR2J3-217ENST00000513438 FAM135BQ49AJ0 1406 aa20.5■□□□□ 0.87
POLR2J3-217ENST00000513438 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
POLR2J3-217ENST00000513438 NUP155O75694 1391 aa20.48■□□□□ 0.87
POLR2J3-217ENST00000513438 NUTM2DQ5VT03 806 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-217ENST00000513438 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
POLR2J3-217ENST00000513438 TMEM131LA2VDJ0 1609 aa20.48■□□□□ 0.87
POLR2J3-217ENST00000513438 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
POLR2J3-217ENST00000513438 E9PCH4 1651 aa20.47■□□□□ 0.87
POLR2J3-217ENST00000513438 NKTRP30414 1462 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-217ENST00000513438 RGS17Q9UGC6 210 aaPredicted RBP20.45■□□□□ 0.86
POLR2J3-217ENST00000513438 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
POLR2J3-217ENST00000513438 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
POLR2J3-217ENST00000513438 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
POLR2J3-217ENST00000513438 MSH6P52701 1360 aa20.43■□□□□ 0.86
POLR2J3-217ENST00000513438 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
POLR2J3-217ENST00000513438 ROBO1Q9Y6N7 1651 aa20.41■□□□□ 0.86
POLR2J3-217ENST00000513438 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
POLR2J3-217ENST00000513438 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
POLR2J3-217ENST00000513438 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
POLR2J3-217ENST00000513438 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
POLR2J3-217ENST00000513438 NCOA3Q9Y6Q9 1424 aa20.34■□□□□ 0.85
POLR2J3-217ENST00000513438 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
POLR2J3-217ENST00000513438 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
POLR2J3-217ENST00000513438 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
POLR2J3-217ENST00000513438 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
POLR2J3-217ENST00000513438 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
POLR2J3-217ENST00000513438 ATF3P18847 181 aa20.3■□□□□ 0.84
POLR2J3-217ENST00000513438 CADPS2Q86UW7 1296 aa20.3■□□□□ 0.84
POLR2J3-217ENST00000513438 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
POLR2J3-217ENST00000513438 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
POLR2J3-217ENST00000513438 TRPM2O94759 1503 aa20.27■□□□□ 0.84
POLR2J3-217ENST00000513438 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.84
POLR2J3-217ENST00000513438 JCADQ9P266 1359 aa20.27■□□□□ 0.84
POLR2J3-217ENST00000513438 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-217ENST00000513438 NAIPQ13075 1403 aa20.26■□□□□ 0.83
POLR2J3-217ENST00000513438 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
POLR2J3-217ENST00000513438 MEX3CQ5U5Q3 659 aaKnown RBP20.23■□□□□ 0.83
POLR2J3-217ENST00000513438 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
POLR2J3-217ENST00000513438 METP08581 1390 aa20.21■□□□□ 0.83
POLR2J3-217ENST00000513438 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
POLR2J3-217ENST00000513438 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
POLR2J3-217ENST00000513438 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
POLR2J3-217ENST00000513438 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
POLR2J3-217ENST00000513438 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
POLR2J3-217ENST00000513438 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-217ENST00000513438 SPATA31A6Q5VVP1 1343 aa20.17■□□□□ 0.82
POLR2J3-217ENST00000513438 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
POLR2J3-217ENST00000513438 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
POLR2J3-217ENST00000513438 KIF1BO60333 1816 aa20.16■□□□□ 0.82
POLR2J3-217ENST00000513438 VGFO15240 615 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-217ENST00000513438 ZNF772Q68DY9 489 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-217ENST00000513438 DCCP43146 1447 aa20.15■□□□□ 0.82
POLR2J3-217ENST00000513438 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-217ENST00000513438 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
POLR2J3-217ENST00000513438 MST1RQ04912 1400 aa20.12■□□□□ 0.81
POLR2J3-217ENST00000513438 NUTM2BA6NNL0 878 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-217ENST00000513438 NUTM2EB1AL46 878 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-217ENST00000513438 NUTM2AQ8IVF1 878 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-217ENST00000513438 LRP6O75581 1613 aa20.12■□□□□ 0.81
POLR2J3-217ENST00000513438 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
POLR2J3-217ENST00000513438 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
POLR2J3-217ENST00000513438 FOXD1Q16676 465 aa20.09■□□□□ 0.81
POLR2J3-217ENST00000513438 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
POLR2J3-217ENST00000513438 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
POLR2J3-217ENST00000513438 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
POLR2J3-217ENST00000513438 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
POLR2J3-217ENST00000513438 RXRBP28702 533 aa20.06■□□□□ 0.8
POLR2J3-217ENST00000513438 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
POLR2J3-217ENST00000513438 UPF1Q92900 1129 aaKnown RBP eCLIP20.04■□□□□ 0.8
POLR2J3-217ENST00000513438 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
POLR2J3-217ENST00000513438 NALCNQ8IZF0 1738 aa20.03■□□□□ 0.8
POLR2J3-217ENST00000513438 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.8
POLR2J3-217ENST00000513438 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
POLR2J3-217ENST00000513438 PTCH1Q13635 1447 aa20.02■□□□□ 0.79
POLR2J3-217ENST00000513438 C1orf167Q5SNV9 1468 aa20.01■□□□□ 0.79
POLR2J3-217ENST00000513438 ORAI2Q96SN7 254 aa20.01■□□□□ 0.79
POLR2J3-217ENST00000513438 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
POLR2J3-217ENST00000513438 PPLO60437 1756 aa20■□□□□ 0.79
POLR2J3-217ENST00000513438 AFF2P51816 1311 aa20■□□□□ 0.79
POLR2J3-217ENST00000513438 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
POLR2J3-217ENST00000513438 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
POLR2J3-217ENST00000513438 CCDC144AA2RUR9 1427 aa19.97■□□□□ 0.79
POLR2J3-217ENST00000513438 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
POLR2J3-217ENST00000513438 PRAG1Q86YV5 1406 aa19.95■□□□□ 0.78
POLR2J3-217ENST00000513438 STK26Q9P289 416 aa19.95■□□□□ 0.78
POLR2J3-217ENST00000513438 SOS2Q07890 1332 aaPredicted RBP19.95■□□□□ 0.78
POLR2J3-217ENST00000513438 ADAMTS2O95450 1211 aa19.93■□□□□ 0.78
POLR2J3-217ENST00000513438 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
POLR2J3-217ENST00000513438 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
POLR2J3-217ENST00000513438 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms