RNA–Protein interactions for RNA: ENST00000513316.1

RAB3C-204, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-204ENST00000513316 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
RAB3C-204ENST00000513316 NEUROD2Q15784 382 aa11.64□□□□□ -0.55
RAB3C-204ENST00000513316 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
RAB3C-204ENST00000513316 SULF1Q8IWU6 871 aa11.62□□□□□ -0.55
RAB3C-204ENST00000513316 ANKK1Q8NFD2 765 aa11.62□□□□□ -0.55
RAB3C-204ENST00000513316 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
RAB3C-204ENST00000513316 GIGYF2Q6Y7W6 1299 aaKnown RBP11.61□□□□□ -0.55
RAB3C-204ENST00000513316 SAMD7Q7Z3H4 446 aa11.61□□□□□ -0.55
RAB3C-204ENST00000513316 SLF2Q8IX21 1173 aa11.61□□□□□ -0.55
RAB3C-204ENST00000513316 LRCH3Q96II8 777 aa11.6□□□□□ -0.55
RAB3C-204ENST00000513316 REPIN1Q9BWE0 567 aaKnown RBP11.6□□□□□ -0.55
RAB3C-204ENST00000513316 FAM217BQ9NTX9 383 aaPredicted RBP11.6□□□□□ -0.55
RAB3C-204ENST00000513316 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
RAB3C-204ENST00000513316 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
RAB3C-204ENST00000513316 WNT2BQ93097 391 aa11.59□□□□□ -0.55
RAB3C-204ENST00000513316 KDM4CQ9H3R0 1056 aa11.59□□□□□ -0.55
RAB3C-204ENST00000513316 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
RAB3C-204ENST00000513316 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
RAB3C-204ENST00000513316 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
RAB3C-204ENST00000513316 SSTR3P32745 418 aaPredicted RBP11.57□□□□□ -0.56
RAB3C-204ENST00000513316 MYT1LQ9UL68 1186 aa11.56□□□□□ -0.56
RAB3C-204ENST00000513316 DDX11L8A8MPP1 907 aa11.55□□□□□ -0.56
RAB3C-204ENST00000513316 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
RAB3C-204ENST00000513316 MS4A1P11836 297 aa11.53□□□□□ -0.56
RAB3C-204ENST00000513316 CD46P15529 392 aa11.53□□□□□ -0.56
RAB3C-204ENST00000513316 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
RAB3C-204ENST00000513316 THSD4Q6ZMP0 1018 aa11.52□□□□□ -0.57
RAB3C-204ENST00000513316 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
RAB3C-204ENST00000513316 RNF40O75150 1001 aa11.51□□□□□ -0.57
RAB3C-204ENST00000513316 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
RAB3C-204ENST00000513316 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
RAB3C-204ENST00000513316 BCAMP50895 628 aa11.5□□□□□ -0.57
RAB3C-204ENST00000513316 SLC10A3P09131 477 aa11.49□□□□□ -0.57
RAB3C-204ENST00000513316 PPP4CP60510 307 aa11.49□□□□□ -0.57
RAB3C-204ENST00000513316 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
RAB3C-204ENST00000513316 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
RAB3C-204ENST00000513316 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
RAB3C-204ENST00000513316 PRR14Q9BWN1 585 aa11.48□□□□□ -0.57
RAB3C-204ENST00000513316 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
RAB3C-204ENST00000513316 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
RAB3C-204ENST00000513316 GCGRP47871 477 aa11.46□□□□□ -0.57
RAB3C-204ENST00000513316 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.57
RAB3C-204ENST00000513316 FAM117AQ9C073 453 aa11.46□□□□□ -0.57
RAB3C-204ENST00000513316 CFHP08603 1231 aa11.44□□□□□ -0.58
RAB3C-204ENST00000513316 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
RAB3C-204ENST00000513316 KDM4AO75164 1064 aa11.42□□□□□ -0.58
RAB3C-204ENST00000513316 USP46P62068 366 aa11.42□□□□□ -0.58
RAB3C-204ENST00000513316 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
RAB3C-204ENST00000513316 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
RAB3C-204ENST00000513316 PLEKHG3A1L390 1219 aa11.41□□□□□ -0.58
RAB3C-204ENST00000513316 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
RAB3C-204ENST00000513316 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
RAB3C-204ENST00000513316 MMRN1Q13201 1228 aa11.4□□□□□ -0.58
RAB3C-204ENST00000513316 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
RAB3C-204ENST00000513316 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
RAB3C-204ENST00000513316 PTPN5P54829 565 aa11.39□□□□□ -0.59
RAB3C-204ENST00000513316 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
RAB3C-204ENST00000513316 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
RAB3C-204ENST00000513316 APLP1P51693 650 aa11.38□□□□□ -0.59
RAB3C-204ENST00000513316 TBC1D2Q9BYX2 928 aa11.38□□□□□ -0.59
RAB3C-204ENST00000513316 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
RAB3C-204ENST00000513316 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
RAB3C-204ENST00000513316 FUT2Q10981 343 aa11.36□□□□□ -0.59
RAB3C-204ENST00000513316 SH3D19Q5HYK7 790 aa11.36□□□□□ -0.59
RAB3C-204ENST00000513316 GJA5P36382 358 aa11.35□□□□□ -0.59
RAB3C-204ENST00000513316 HOXA2O43364 376 aa11.34□□□□□ -0.59
RAB3C-204ENST00000513316 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
RAB3C-204ENST00000513316 PCDHB3Q9Y5E6 796 aa11.34□□□□□ -0.59
RAB3C-204ENST00000513316 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
RAB3C-204ENST00000513316 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
RAB3C-204ENST00000513316 SPTLC1O15269 473 aa11.3□□□□□ -0.6
RAB3C-204ENST00000513316 TUSC1Q2TAM9 212 aa11.3□□□□□ -0.6
RAB3C-204ENST00000513316 MORN1Q5T089 497 aa11.3□□□□□ -0.6
RAB3C-204ENST00000513316 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
RAB3C-204ENST00000513316 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
RAB3C-204ENST00000513316 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
RAB3C-204ENST00000513316 NR1I2O75469 434 aa11.28□□□□□ -0.6
RAB3C-204ENST00000513316 FDX1P10109 184 aa11.27□□□□□ -0.61
RAB3C-204ENST00000513316 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
RAB3C-204ENST00000513316 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
RAB3C-204ENST00000513316 NDUFV2P19404 249 aa11.26□□□□□ -0.61
RAB3C-204ENST00000513316 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
RAB3C-204ENST00000513316 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
RAB3C-204ENST00000513316 Q3C1V9 767 aa11.25□□□□□ -0.61
RAB3C-204ENST00000513316 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
RAB3C-204ENST00000513316 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
RAB3C-204ENST00000513316 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
RAB3C-204ENST00000513316 SCUBE3Q8IX30 993 aa11.24□□□□□ -0.61
RAB3C-204ENST00000513316 MTRQ99707 1265 aa11.24□□□□□ -0.61
RAB3C-204ENST00000513316 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
RAB3C-204ENST00000513316 COPS2P61201 443 aa11.23□□□□□ -0.61
RAB3C-204ENST00000513316 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
RAB3C-204ENST00000513316 PRPF38BQ5VTL8 546 aaKnown RBP11.23□□□□□ -0.61
RAB3C-204ENST00000513316 HLA-CQ95604 372 aa11.23□□□□□ -0.61
RAB3C-204ENST00000513316 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
RAB3C-204ENST00000513316 GUCA2AQ02747 115 aa11.22□□□□□ -0.61
RAB3C-204ENST00000513316 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
RAB3C-204ENST00000513316 SPDYE5A6NIY4 337 aa11.21□□□□□ -0.61
RAB3C-204ENST00000513316 ZPR1O75312 459 aa11.21□□□□□ -0.61
RAB3C-204ENST00000513316 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms