RNA–Protein interactions for RNA: ENST00000513144.1

SERF1B-206, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-206ENST00000513144 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
SERF1B-206ENST00000513144 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
SERF1B-206ENST00000513144 DNAJB2P25686 324 aa11.13□□□□□ -0.63
SERF1B-206ENST00000513144 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
SERF1B-206ENST00000513144 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
SERF1B-206ENST00000513144 RNF40O75150 1001 aa11.12□□□□□ -0.63
SERF1B-206ENST00000513144 PPP4CP60510 307 aa11.12□□□□□ -0.63
SERF1B-206ENST00000513144 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
SERF1B-206ENST00000513144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
SERF1B-206ENST00000513144 NYAP1Q6ZVC0 841 aa11.09□□□□□ -0.63
SERF1B-206ENST00000513144 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
SERF1B-206ENST00000513144 KRI1Q8N9T8 703 aaKnown RBP11.07□□□□□ -0.64
SERF1B-206ENST00000513144 SLC10A3P09131 477 aa11.04□□□□□ -0.64
SERF1B-206ENST00000513144 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
SERF1B-206ENST00000513144 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
SERF1B-206ENST00000513144 APLP1P51693 650 aa11.02□□□□□ -0.65
SERF1B-206ENST00000513144 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
SERF1B-206ENST00000513144 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
SERF1B-206ENST00000513144 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
SERF1B-206ENST00000513144 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
SERF1B-206ENST00000513144 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
SERF1B-206ENST00000513144 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
SERF1B-206ENST00000513144 TRIM66O15016 1216 aa10.98□□□□□ -0.65
SERF1B-206ENST00000513144 AK7Q96M32 723 aa10.98□□□□□ -0.65
SERF1B-206ENST00000513144 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
SERF1B-206ENST00000513144 DDX11L8A8MPP1 907 aa10.96□□□□□ -0.65
SERF1B-206ENST00000513144 KCNC4Q03721 635 aa10.96□□□□□ -0.65
SERF1B-206ENST00000513144 AMHR2Q16671 573 aa10.96□□□□□ -0.65
SERF1B-206ENST00000513144 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
SERF1B-206ENST00000513144 MTRQ99707 1265 aa10.95□□□□□ -0.66
SERF1B-206ENST00000513144 CFHP08603 1231 aa10.94□□□□□ -0.66
SERF1B-206ENST00000513144 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
SERF1B-206ENST00000513144 CLCN1P35523 988 aa10.92□□□□□ -0.66
SERF1B-206ENST00000513144 KMT5BQ4FZB7 885 aa10.92□□□□□ -0.66
SERF1B-206ENST00000513144 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
SERF1B-206ENST00000513144 PRR14Q9BWN1 585 aa10.92□□□□□ -0.66
SERF1B-206ENST00000513144 IL21Q9HBE4 155 aa10.92□□□□□ -0.66
SERF1B-206ENST00000513144 FAM217BQ9NTX9 383 aaPredicted RBP10.92□□□□□ -0.66
SERF1B-206ENST00000513144 CD46P15529 392 aa10.91□□□□□ -0.66
SERF1B-206ENST00000513144 COPS2P61201 443 aa10.91□□□□□ -0.66
SERF1B-206ENST00000513144 SULF1Q8IWU6 871 aa10.91□□□□□ -0.66
SERF1B-206ENST00000513144 PCDHB3Q9Y5E6 796 aa10.91□□□□□ -0.66
SERF1B-206ENST00000513144 ACTN4O43707 911 aaKnown RBP10.9□□□□□ -0.66
SERF1B-206ENST00000513144 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
SERF1B-206ENST00000513144 ZNF516Q92618 1163 aa10.9□□□□□ -0.66
SERF1B-206ENST00000513144 A0A0G2JS52 829 aa10.89□□□□□ -0.67
SERF1B-206ENST00000513144 GCGRP47871 477 aa10.89□□□□□ -0.67
SERF1B-206ENST00000513144 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
SERF1B-206ENST00000513144 PDE4DQ08499 809 aa10.88□□□□□ -0.67
SERF1B-206ENST00000513144 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
SERF1B-206ENST00000513144 TPRNQ4KMQ1 711 aa10.88□□□□□ -0.67
SERF1B-206ENST00000513144 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
SERF1B-206ENST00000513144 Q6ZNB5 142 aa10.88□□□□□ -0.67
SERF1B-206ENST00000513144 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
SERF1B-206ENST00000513144 SSTR3P32745 418 aaPredicted RBP10.86□□□□□ -0.67
SERF1B-206ENST00000513144 FUT2Q10981 343 aa10.84□□□□□ -0.67
SERF1B-206ENST00000513144 PUS10Q3MIT2 529 aaKnown RBP10.84□□□□□ -0.67
SERF1B-206ENST00000513144 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
SERF1B-206ENST00000513144 ZPR1O75312 459 aa10.83□□□□□ -0.68
SERF1B-206ENST00000513144 MS4A1P11836 297 aa10.83□□□□□ -0.68
SERF1B-206ENST00000513144 PRKCSHP14314 528 aaPredicted RBP10.81□□□□□ -0.68
SERF1B-206ENST00000513144 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
SERF1B-206ENST00000513144 MORN1Q5T089 497 aa10.79□□□□□ -0.68
SERF1B-206ENST00000513144 SCUBE3Q8IX30 993 aa10.79□□□□□ -0.68
SERF1B-206ENST00000513144 TLL1O43897 1013 aa10.78□□□□□ -0.68
SERF1B-206ENST00000513144 KDM4AO75164 1064 aa10.78□□□□□ -0.68
SERF1B-206ENST00000513144 NR1I2O75469 434 aa10.77□□□□□ -0.69
SERF1B-206ENST00000513144 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
SERF1B-206ENST00000513144 HLA-CQ95604 372 aa10.77□□□□□ -0.69
SERF1B-206ENST00000513144 BEGAINQ9BUH8 593 aa10.77□□□□□ -0.69
SERF1B-206ENST00000513144 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
SERF1B-206ENST00000513144 SLC27A5Q9Y2P5 690 aa10.76□□□□□ -0.69
SERF1B-206ENST00000513144 SPIRE2Q8WWL2 714 aa10.75□□□□□ -0.69
SERF1B-206ENST00000513144 HOXA2O43364 376 aa10.74□□□□□ -0.69
SERF1B-206ENST00000513144 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
SERF1B-206ENST00000513144 THAP11Q96EK4 314 aa10.73□□□□□ -0.69
SERF1B-206ENST00000513144 ADH1BP00325 375 aa10.72□□□□□ -0.69
SERF1B-206ENST00000513144 USP46P62068 366 aa10.72□□□□□ -0.69
SERF1B-206ENST00000513144 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
SERF1B-206ENST00000513144 NUTM1Q86Y26 1132 aa10.72□□□□□ -0.69
SERF1B-206ENST00000513144 KDM4CQ9H3R0 1056 aa10.72□□□□□ -0.69
SERF1B-206ENST00000513144 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
SERF1B-206ENST00000513144 GGCXP38435 758 aa10.7□□□□□ -0.7
SERF1B-206ENST00000513144 MOXD2PA6NHM9 499 aa10.69□□□□□ -0.7
SERF1B-206ENST00000513144 NDUFV2P19404 249 aa10.69□□□□□ -0.7
SERF1B-206ENST00000513144 BRICD5Q6PL45 260 aa10.69□□□□□ -0.7
SERF1B-206ENST00000513144 RNF19BQ6ZMZ0 732 aa10.69□□□□□ -0.7
SERF1B-206ENST00000513144 SPSB2Q99619 263 aa10.69□□□□□ -0.7
SERF1B-206ENST00000513144 TBC1D2Q9BYX2 928 aa10.69□□□□□ -0.7
SERF1B-206ENST00000513144 S1PR4O95977 384 aa10.68□□□□□ -0.7
SERF1B-206ENST00000513144 FAM117AQ9C073 453 aa10.68□□□□□ -0.7
SERF1B-206ENST00000513144 PCDHGC3Q9UN70 934 aa10.68□□□□□ -0.7
SERF1B-206ENST00000513144 SALL2Q9Y467 1007 aaPredicted RBP10.68□□□□□ -0.7
SERF1B-206ENST00000513144 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
SERF1B-206ENST00000513144 FAM160A2Q8N612 972 aaPredicted RBP10.67□□□□□ -0.7
SERF1B-206ENST00000513144 RNF223E7ERA6 249 aa10.66□□□□□ -0.7
SERF1B-206ENST00000513144 PPEF1O14829 653 aaPredicted RBP10.66□□□□□ -0.7
SERF1B-206ENST00000513144 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
SERF1B-206ENST00000513144 SLC6A16Q9GZN6 736 aa10.66□□□□□ -0.7
SERF1B-206ENST00000513144 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms