RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 E9PCH4 1651 aa9.8□□□□□ -0.84
KDM3B-208ENST00000512928 MED14O60244 1454 aa9.8□□□□□ -0.84
KDM3B-208ENST00000512928 SLIT1O75093 1534 aa9.8□□□□□ -0.84
KDM3B-208ENST00000512928 TMEM2Q9UHN6 1383 aa9.79□□□□□ -0.84
KDM3B-208ENST00000512928 PPP1R15AO75807 674 aaPredicted RBP9.79□□□□□ -0.84
KDM3B-208ENST00000512928 LTKP29376 864 aa9.79□□□□□ -0.84
KDM3B-208ENST00000512928 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
KDM3B-208ENST00000512928 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
KDM3B-208ENST00000512928 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
KDM3B-208ENST00000512928 NAIPQ13075 1403 aa9.78□□□□□ -0.84
KDM3B-208ENST00000512928 SETD1AO15047 1707 aaKnown RBP9.78□□□□□ -0.84
KDM3B-208ENST00000512928 ARHGAP23Q9P227 1491 aa9.78□□□□□ -0.84
KDM3B-208ENST00000512928 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.84
KDM3B-208ENST00000512928 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
KDM3B-208ENST00000512928 TOM1O60784 492 aa9.76□□□□□ -0.85
KDM3B-208ENST00000512928 RGS17Q9UGC6 210 aaPredicted RBP9.76□□□□□ -0.85
KDM3B-208ENST00000512928 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
KDM3B-208ENST00000512928 SLC26A8Q96RN1 970 aa9.75□□□□□ -0.85
KDM3B-208ENST00000512928 MYO5BQ9ULV0 1848 aa9.75□□□□□ -0.85
KDM3B-208ENST00000512928 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
KDM3B-208ENST00000512928 RIMS2Q9UQ26 1411 aa9.74□□□□□ -0.85
KDM3B-208ENST00000512928 SPHKAPQ2M3C7 1700 aa9.74□□□□□ -0.85
KDM3B-208ENST00000512928 HDGFP51858 240 aaKnown RBP9.74□□□□□ -0.85
KDM3B-208ENST00000512928 ZNF326Q5BKZ1 582 aaKnown RBP9.74□□□□□ -0.85
KDM3B-208ENST00000512928 SLC4A1APQ9BWU0 796 aaKnown RBP9.73□□□□□ -0.85
KDM3B-208ENST00000512928 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.72□□□□□ -0.85
KDM3B-208ENST00000512928 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
KDM3B-208ENST00000512928 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
KDM3B-208ENST00000512928 PLEKHG1Q9ULL1 1385 aa9.7□□□□□ -0.86
KDM3B-208ENST00000512928 TRPM2O94759 1503 aa9.7□□□□□ -0.86
KDM3B-208ENST00000512928 CLTCL1P53675 1640 aa9.7□□□□□ -0.86
KDM3B-208ENST00000512928 KCNA6P17658 529 aa9.68□□□□□ -0.86
KDM3B-208ENST00000512928 POTEAQ6S8J7 498 aa9.68□□□□□ -0.86
KDM3B-208ENST00000512928 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
KDM3B-208ENST00000512928 TMEM94Q12767 1356 aa9.67□□□□□ -0.86
KDM3B-208ENST00000512928 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
KDM3B-208ENST00000512928 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
KDM3B-208ENST00000512928 KIF1BO60333 1816 aa9.66□□□□□ -0.86
KDM3B-208ENST00000512928 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
KDM3B-208ENST00000512928 PHLPP1O60346 1717 aa9.65□□□□□ -0.86
KDM3B-208ENST00000512928 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
KDM3B-208ENST00000512928 DIP2AQ14689 1571 aa9.65□□□□□ -0.86
KDM3B-208ENST00000512928 NWD1Q149M9 1564 aa9.65□□□□□ -0.86
KDM3B-208ENST00000512928 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.87
KDM3B-208ENST00000512928 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.87
KDM3B-208ENST00000512928 TBX22Q9Y458 520 aa9.64□□□□□ -0.87
KDM3B-208ENST00000512928 NEXMIFQ5QGS0 1516 aa9.64□□□□□ -0.87
KDM3B-208ENST00000512928 MSH6P52701 1360 aa9.63□□□□□ -0.87
KDM3B-208ENST00000512928 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
KDM3B-208ENST00000512928 LRP6O75581 1613 aa9.63□□□□□ -0.87
KDM3B-208ENST00000512928 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
KDM3B-208ENST00000512928 RGL3Q3MIN7 710 aa9.62□□□□□ -0.87
KDM3B-208ENST00000512928 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
KDM3B-208ENST00000512928 SETBP1Q9Y6X0 1596 aa9.62□□□□□ -0.87
KDM3B-208ENST00000512928 NRXN3Q9Y4C0 1643 aa9.61□□□□□ -0.87
KDM3B-208ENST00000512928 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
KDM3B-208ENST00000512928 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
KDM3B-208ENST00000512928 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
KDM3B-208ENST00000512928 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
KDM3B-208ENST00000512928 VGFO15240 615 aaPredicted RBP9.6□□□□□ -0.87
KDM3B-208ENST00000512928 PTPRUQ92729 1446 aa9.59□□□□□ -0.87
KDM3B-208ENST00000512928 METP08581 1390 aa9.59□□□□□ -0.87
KDM3B-208ENST00000512928 RPGRIP1LQ68CZ1 1315 aa9.58□□□□□ -0.88
KDM3B-208ENST00000512928 PPLO60437 1756 aa9.58□□□□□ -0.88
KDM3B-208ENST00000512928 ATF3P18847 181 aa9.58□□□□□ -0.88
KDM3B-208ENST00000512928 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.58□□□□□ -0.88
KDM3B-208ENST00000512928 XRN1Q8IZH2 1706 aaKnown RBP9.57□□□□□ -0.88
KDM3B-208ENST00000512928 SLAIN2Q9P270 581 aa9.57□□□□□ -0.88
KDM3B-208ENST00000512928 C19orf44Q9H6X5 657 aa9.56□□□□□ -0.88
KDM3B-208ENST00000512928 SPATA31E1Q6ZUB1 1445 aa9.56□□□□□ -0.88
KDM3B-208ENST00000512928 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
KDM3B-208ENST00000512928 NCOA3Q9Y6Q9 1424 aa9.55□□□□□ -0.88
KDM3B-208ENST00000512928 ADGRF5Q8IZF2 1346 aa9.55□□□□□ -0.88
KDM3B-208ENST00000512928 ANKRD30BQ9BXX2 1392 aa9.54□□□□□ -0.88
KDM3B-208ENST00000512928 IFT172Q9UG01 1749 aa9.53□□□□□ -0.88
KDM3B-208ENST00000512928 SHPRHQ149N8 1683 aa9.53□□□□□ -0.88
KDM3B-208ENST00000512928 DDX17Q92841 729 aaKnown RBP9.53□□□□□ -0.88
KDM3B-208ENST00000512928 STK26Q9P289 416 aa9.53□□□□□ -0.88
KDM3B-208ENST00000512928 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.89
KDM3B-208ENST00000512928 ADGRL3Q9HAR2 1447 aa9.52□□□□□ -0.89
KDM3B-208ENST00000512928 AHDC1Q5TGY3 1603 aaPredicted RBP9.52□□□□□ -0.89
KDM3B-208ENST00000512928 ROBO2Q9HCK4 1378 aa9.51□□□□□ -0.89
KDM3B-208ENST00000512928 JCADQ9P266 1359 aa9.51□□□□□ -0.89
KDM3B-208ENST00000512928 DCCP43146 1447 aa9.51□□□□□ -0.89
KDM3B-208ENST00000512928 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
KDM3B-208ENST00000512928 TMEM132EQ6IEE7 984 aa9.51□□□□□ -0.89
KDM3B-208ENST00000512928 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
KDM3B-208ENST00000512928 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
KDM3B-208ENST00000512928 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
KDM3B-208ENST00000512928 HRCP23327 699 aa9.5□□□□□ -0.89
KDM3B-208ENST00000512928 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
KDM3B-208ENST00000512928 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
KDM3B-208ENST00000512928 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
KDM3B-208ENST00000512928 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
KDM3B-208ENST00000512928 ASXL1Q8IXJ9 1541 aa9.49□□□□□ -0.89
KDM3B-208ENST00000512928 MST1RQ04912 1400 aa9.48□□□□□ -0.89
KDM3B-208ENST00000512928 MYOM2P54296 1465 aa9.48□□□□□ -0.89
KDM3B-208ENST00000512928 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
KDM3B-208ENST00000512928 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
KDM3B-208ENST00000512928 UPF1Q92900 1129 aaKnown RBP eCLIP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms