RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 JCADQ9P266 1359 aa16.47■□□□□ 0.23
PFDN1-205ENST00000512925 NKTRP30414 1462 aaKnown RBP16.47■□□□□ 0.23
PFDN1-205ENST00000512925 NOS1P29475 1434 aa16.46■□□□□ 0.23
PFDN1-205ENST00000512925 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
PFDN1-205ENST00000512925 NWD1Q149M9 1564 aa16.46■□□□□ 0.23
PFDN1-205ENST00000512925 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
PFDN1-205ENST00000512925 MSH6P52701 1360 aa16.45■□□□□ 0.22
PFDN1-205ENST00000512925 KANK1Q14678 1352 aa16.45■□□□□ 0.22
PFDN1-205ENST00000512925 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.221e-7■■■■■ 43.1
PFDN1-205ENST00000512925 SLC52A1Q9NWF4 448 aa16.42■□□□□ 0.22
PFDN1-205ENST00000512925 DAPK1P53355 1430 aa16.42■□□□□ 0.22
PFDN1-205ENST00000512925 ADGRB3O60242 1522 aa16.41■□□□□ 0.22
PFDN1-205ENST00000512925 PHLPP1O60346 1717 aa16.41■□□□□ 0.22
PFDN1-205ENST00000512925 LRP6O75581 1613 aa16.41■□□□□ 0.22
PFDN1-205ENST00000512925 COL16A1Q07092 1604 aaPredicted RBP16.4■□□□□ 0.22
PFDN1-205ENST00000512925 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
PFDN1-205ENST00000512925 ZFYVE9O95405 1425 aa16.39■□□□□ 0.21
PFDN1-205ENST00000512925 BCANQ96GW7 911 aa16.39■□□□□ 0.21
PFDN1-205ENST00000512925 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
PFDN1-205ENST00000512925 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
PFDN1-205ENST00000512925 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
PFDN1-205ENST00000512925 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
PFDN1-205ENST00000512925 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
PFDN1-205ENST00000512925 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
PFDN1-205ENST00000512925 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
PFDN1-205ENST00000512925 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
PFDN1-205ENST00000512925 ANKRD30AQ9BXX3 1397 aa16.37■□□□□ 0.21
PFDN1-205ENST00000512925 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
PFDN1-205ENST00000512925 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
PFDN1-205ENST00000512925 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
PFDN1-205ENST00000512925 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
PFDN1-205ENST00000512925 MEX3CQ5U5Q3 659 aaKnown RBP16.33■□□□□ 0.2
PFDN1-205ENST00000512925 HDGFP51858 240 aaKnown RBP16.32■□□□□ 0.2
PFDN1-205ENST00000512925 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
PFDN1-205ENST00000512925 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
PFDN1-205ENST00000512925 RPRD2Q5VT52 1461 aaKnown RBP16.31■□□□□ 0.2
PFDN1-205ENST00000512925 ADAMTS13Q76LX8 1427 aa16.31■□□□□ 0.2
PFDN1-205ENST00000512925 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
PFDN1-205ENST00000512925 CADPS2Q86UW7 1296 aa16.31■□□□□ 0.2
PFDN1-205ENST00000512925 RXRBP28702 533 aa16.3■□□□□ 0.2
PFDN1-205ENST00000512925 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
PFDN1-205ENST00000512925 SRCAPQ6ZRS2 3230 aa16.29■□□□□ 0.2
PFDN1-205ENST00000512925 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
PFDN1-205ENST00000512925 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
PFDN1-205ENST00000512925 SHPRHQ149N8 1683 aa16.28■□□□□ 0.2
PFDN1-205ENST00000512925 ATF3P18847 181 aa16.28■□□□□ 0.2
PFDN1-205ENST00000512925 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
PFDN1-205ENST00000512925 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
PFDN1-205ENST00000512925 PIK3R4Q99570 1358 aa16.27■□□□□ 0.2
PFDN1-205ENST00000512925 DIP2AQ14689 1571 aa16.27■□□□□ 0.2
PFDN1-205ENST00000512925 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.2
PFDN1-205ENST00000512925 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
PFDN1-205ENST00000512925 CDK12Q9NYV4 1490 aaPredicted RBP16.27■□□□□ 0.19
PFDN1-205ENST00000512925 MYO5BQ9ULV0 1848 aa16.26■□□□□ 0.19
PFDN1-205ENST00000512925 ANKRD50Q9ULJ7 1429 aa16.26■□□□□ 0.19
PFDN1-205ENST00000512925 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
PFDN1-205ENST00000512925 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
PFDN1-205ENST00000512925 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
PFDN1-205ENST00000512925 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
PFDN1-205ENST00000512925 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
PFDN1-205ENST00000512925 PTPRUQ92729 1446 aa16.25■□□□□ 0.19
PFDN1-205ENST00000512925 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
PFDN1-205ENST00000512925 AFF2P51816 1311 aa16.23■□□□□ 0.19
PFDN1-205ENST00000512925 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
PFDN1-205ENST00000512925 APLP2Q06481 763 aa16.22■□□□□ 0.19
PFDN1-205ENST00000512925 DCCP43146 1447 aa16.19■□□□□ 0.18
PFDN1-205ENST00000512925 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
PFDN1-205ENST00000512925 RGS12O14924 1447 aa16.19■□□□□ 0.18
PFDN1-205ENST00000512925 MST1RQ04912 1400 aa16.19■□□□□ 0.18
PFDN1-205ENST00000512925 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
PFDN1-205ENST00000512925 LRRC59Q96AG4 307 aaKnown RBP16.18■□□□□ 0.18
PFDN1-205ENST00000512925 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
PFDN1-205ENST00000512925 TRPM2O94759 1503 aa16.18■□□□□ 0.18
PFDN1-205ENST00000512925 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
PFDN1-205ENST00000512925 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
PFDN1-205ENST00000512925 C8orf37Q96NL8 207 aa16.16■□□□□ 0.18
PFDN1-205ENST00000512925 PNPLA6Q8IY17 1366 aa16.15■□□□□ 0.18
PFDN1-205ENST00000512925 E9PCH4 1651 aa16.15■□□□□ 0.18
PFDN1-205ENST00000512925 UNC13BO14795 1591 aa16.15■□□□□ 0.18
PFDN1-205ENST00000512925 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.17
PFDN1-205ENST00000512925 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
PFDN1-205ENST00000512925 XRN1Q8IZH2 1706 aaKnown RBP16.13■□□□□ 0.17
PFDN1-205ENST00000512925 METP08581 1390 aa16.13■□□□□ 0.17
PFDN1-205ENST00000512925 NRXN3Q9Y4C0 1643 aa16.12■□□□□ 0.17
PFDN1-205ENST00000512925 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
PFDN1-205ENST00000512925 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
PFDN1-205ENST00000512925 ADGRL3Q9HAR2 1447 aa16.09■□□□□ 0.17
PFDN1-205ENST00000512925 IQGAP3Q86VI3 1631 aa16.08■□□□□ 0.17
PFDN1-205ENST00000512925 ADAMTS2O95450 1211 aa16.08■□□□□ 0.16
PFDN1-205ENST00000512925 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
PFDN1-205ENST00000512925 NUP155O75694 1391 aa16.08■□□□□ 0.16
PFDN1-205ENST00000512925 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
PFDN1-205ENST00000512925 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
PFDN1-205ENST00000512925 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
PFDN1-205ENST00000512925 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
PFDN1-205ENST00000512925 FNBP4Q8N3X1 1017 aaPredicted RBP16.05■□□□□ 0.16
PFDN1-205ENST00000512925 USP21Q9UK80 565 aa16.05■□□□□ 0.16
PFDN1-205ENST00000512925 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
PFDN1-205ENST00000512925 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
PFDN1-205ENST00000512925 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms