RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 SOCS7O14512 581 aa12.87□□□□□ -0.35
RFC1-214ENST00000512726 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
RFC1-214ENST00000512726 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
RFC1-214ENST00000512726 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
RFC1-214ENST00000512726 EYA1Q99502 592 aa12.87□□□□□ -0.35
RFC1-214ENST00000512726 GJA5P36382 358 aa12.86□□□□□ -0.35
RFC1-214ENST00000512726 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
RFC1-214ENST00000512726 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
RFC1-214ENST00000512726 DNAJB2P25686 324 aa12.84□□□□□ -0.35
RFC1-214ENST00000512726 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
RFC1-214ENST00000512726 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
RFC1-214ENST00000512726 ZSWIM6Q9HCJ5 1215 aa12.83□□□□□ -0.36
RFC1-214ENST00000512726 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
RFC1-214ENST00000512726 MOXD2PA6NHM9 499 aa12.82□□□□□ -0.36
RFC1-214ENST00000512726 ABL2P42684 1182 aa12.82□□□□□ -0.36
RFC1-214ENST00000512726 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.36
RFC1-214ENST00000512726 CALR3Q96L12 384 aaKnown RBP12.82□□□□□ -0.36
RFC1-214ENST00000512726 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
RFC1-214ENST00000512726 LILRB3O75022 631 aa12.81□□□□□ -0.36
RFC1-214ENST00000512726 AP1G2O75843 785 aa12.81□□□□□ -0.36
RFC1-214ENST00000512726 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
RFC1-214ENST00000512726 COL9A1P20849 921 aa12.8□□□□□ -0.36
RFC1-214ENST00000512726 NUDT18Q6ZVK8 323 aa12.8□□□□□ -0.36
RFC1-214ENST00000512726 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
RFC1-214ENST00000512726 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
RFC1-214ENST00000512726 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
RFC1-214ENST00000512726 PPP1R15AO75807 674 aaPredicted RBP12.79□□□□□ -0.36
RFC1-214ENST00000512726 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
RFC1-214ENST00000512726 QPCTQ16769 361 aa12.79□□□□□ -0.36
RFC1-214ENST00000512726 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
RFC1-214ENST00000512726 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
RFC1-214ENST00000512726 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
RFC1-214ENST00000512726 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
RFC1-214ENST00000512726 RETREG2Q8NC44 543 aa12.78□□□□□ -0.36
RFC1-214ENST00000512726 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
RFC1-214ENST00000512726 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
RFC1-214ENST00000512726 NDUFV2P19404 249 aa12.77□□□□□ -0.37
RFC1-214ENST00000512726 PACS2Q86VP3 889 aa12.77□□□□□ -0.37
RFC1-214ENST00000512726 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
RFC1-214ENST00000512726 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
RFC1-214ENST00000512726 ACIN1Q9UKV3 1341 aaKnown RBP12.77□□□□□ -0.37
RFC1-214ENST00000512726 PTPREP23469 700 aa12.76□□□□□ -0.37
RFC1-214ENST00000512726 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
RFC1-214ENST00000512726 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
RFC1-214ENST00000512726 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
RFC1-214ENST00000512726 TATDN2Q93075 761 aa12.76□□□□□ -0.37
RFC1-214ENST00000512726 TBC1D2BQ9UPU7 963 aa12.76□□□□□ -0.37
RFC1-214ENST00000512726 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
RFC1-214ENST00000512726 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
RFC1-214ENST00000512726 PDE4CQ08493 712 aa12.75□□□□□ -0.37
RFC1-214ENST00000512726 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
RFC1-214ENST00000512726 RDH13Q8NBN7 331 aa12.75□□□□□ -0.37
RFC1-214ENST00000512726 GLMNQ92990 594 aa12.75□□□□□ -0.37
RFC1-214ENST00000512726 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
RFC1-214ENST00000512726 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
RFC1-214ENST00000512726 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
RFC1-214ENST00000512726 KDM4AO75164 1064 aa12.73□□□□□ -0.37
RFC1-214ENST00000512726 USP46P62068 366 aa12.73□□□□□ -0.37
RFC1-214ENST00000512726 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
RFC1-214ENST00000512726 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
RFC1-214ENST00000512726 POM121CA8CG34 1229 aa12.71□□□□□ -0.37
RFC1-214ENST00000512726 C3orf80F5H4A9 247 aa12.71□□□□□ -0.37
RFC1-214ENST00000512726 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
RFC1-214ENST00000512726 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
RFC1-214ENST00000512726 WASHC4Q2M389 1173 aa12.67□□□□□ -0.38
RFC1-214ENST00000512726 FDX1P10109 184 aa12.66□□□□□ -0.38
RFC1-214ENST00000512726 GCGRP47871 477 aa12.66□□□□□ -0.38
RFC1-214ENST00000512726 HOXA2O43364 376 aa12.65□□□□□ -0.38
RFC1-214ENST00000512726 GJD4Q96KN9 370 aaPredicted RBP12.65□□□□□ -0.38
RFC1-214ENST00000512726 IRF5Q13568 498 aa12.64□□□□□ -0.39
RFC1-214ENST00000512726 HDGFL1Q5TGJ6 251 aa12.64□□□□□ -0.39
RFC1-214ENST00000512726 SMAPO00193 183 aa12.63□□□□□ -0.39
RFC1-214ENST00000512726 PBXIP1Q96AQ6 731 aa12.63□□□□□ -0.39
RFC1-214ENST00000512726 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
RFC1-214ENST00000512726 TMCO4Q5TGY1 634 aa12.61□□□□□ -0.39
RFC1-214ENST00000512726 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
RFC1-214ENST00000512726 PATL2C9JE40 543 aaKnown RBP12.6□□□□□ -0.39
RFC1-214ENST00000512726 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
RFC1-214ENST00000512726 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
RFC1-214ENST00000512726 CTDSPL2Q05D32 466 aa12.59□□□□□ -0.39
RFC1-214ENST00000512726 MTMR2Q13614 643 aa12.59□□□□□ -0.39
RFC1-214ENST00000512726 GZF1Q9H116 711 aaPredicted RBP12.59□□□□□ -0.39
RFC1-214ENST00000512726 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
RFC1-214ENST00000512726 ADAMTS19Q8TE59 1207 aa12.57□□□□□ -0.4
RFC1-214ENST00000512726 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
RFC1-214ENST00000512726 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
RFC1-214ENST00000512726 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
RFC1-214ENST00000512726 TSC1Q92574 1164 aa12.56□□□□□ -0.4
RFC1-214ENST00000512726 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
RFC1-214ENST00000512726 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
RFC1-214ENST00000512726 KIAA1468Q9P260 1216 aa12.56□□□□□ -0.4
RFC1-214ENST00000512726 SLC10A3P09131 477 aa12.55□□□□□ -0.4
RFC1-214ENST00000512726 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
RFC1-214ENST00000512726 RFX1P22670 979 aa12.55□□□□□ -0.4
RFC1-214ENST00000512726 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
RFC1-214ENST00000512726 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
RFC1-214ENST00000512726 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
RFC1-214ENST00000512726 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
RFC1-214ENST00000512726 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
RFC1-214ENST00000512726 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms