RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
YIPF3-216ENST00000512713 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
YIPF3-216ENST00000512713 UNC13BO14795 1591 aa13.83□□□□□ -0.19
YIPF3-216ENST00000512713 ZFYVE9O95405 1425 aa13.83□□□□□ -0.2
YIPF3-216ENST00000512713 TET3O43151 1660 aa13.83□□□□□ -0.2
YIPF3-216ENST00000512713 ZNF326Q5BKZ1 582 aaKnown RBP13.82□□□□□ -0.2
YIPF3-216ENST00000512713 ILDR2Q71H61 639 aa13.82□□□□□ -0.2
YIPF3-216ENST00000512713 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
YIPF3-216ENST00000512713 KDM5AP29375 1690 aaKnown RBP13.82□□□□□ -0.2
YIPF3-216ENST00000512713 CFAP65Q6ZU64 1925 aaKnown RBP13.81□□□□□ -0.2
YIPF3-216ENST00000512713 NAIPQ13075 1403 aa13.81□□□□□ -0.2
YIPF3-216ENST00000512713 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
YIPF3-216ENST00000512713 MSH6P52701 1360 aa13.79□□□□□ -0.2
YIPF3-216ENST00000512713 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
YIPF3-216ENST00000512713 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
YIPF3-216ENST00000512713 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
YIPF3-216ENST00000512713 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
YIPF3-216ENST00000512713 FAM135BQ49AJ0 1406 aa13.77□□□□□ -0.21
YIPF3-216ENST00000512713 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
YIPF3-216ENST00000512713 SLAIN2Q9P270 581 aa13.77□□□□□ -0.21
YIPF3-216ENST00000512713 PIK3R4Q99570 1358 aa13.76□□□□□ -0.21
YIPF3-216ENST00000512713 SOCS7O14512 581 aa13.76□□□□□ -0.21
YIPF3-216ENST00000512713 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
YIPF3-216ENST00000512713 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
YIPF3-216ENST00000512713 GCC2Q8IWJ2 1684 aa13.75□□□□□ -0.21
YIPF3-216ENST00000512713 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
YIPF3-216ENST00000512713 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
YIPF3-216ENST00000512713 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
YIPF3-216ENST00000512713 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
YIPF3-216ENST00000512713 E9PCH4 1651 aa13.73□□□□□ -0.21
YIPF3-216ENST00000512713 ATF3P18847 181 aa13.73□□□□□ -0.21
YIPF3-216ENST00000512713 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
YIPF3-216ENST00000512713 VGFO15240 615 aaPredicted RBP13.72□□□□□ -0.21
YIPF3-216ENST00000512713 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
YIPF3-216ENST00000512713 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
YIPF3-216ENST00000512713 RPGRIP1LQ68CZ1 1315 aa13.69□□□□□ -0.22
YIPF3-216ENST00000512713 NWD1Q149M9 1564 aa13.69□□□□□ -0.22
YIPF3-216ENST00000512713 DIP2AQ14689 1571 aa13.67□□□□□ -0.22
YIPF3-216ENST00000512713 FOXD1Q16676 465 aa13.67□□□□□ -0.22
YIPF3-216ENST00000512713 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
YIPF3-216ENST00000512713 METP08581 1390 aa13.67□□□□□ -0.22
YIPF3-216ENST00000512713 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
YIPF3-216ENST00000512713 TRPM2O94759 1503 aa13.66□□□□□ -0.22
YIPF3-216ENST00000512713 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
YIPF3-216ENST00000512713 RGL3Q3MIN7 710 aa13.63□□□□□ -0.23
YIPF3-216ENST00000512713 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
YIPF3-216ENST00000512713 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
YIPF3-216ENST00000512713 JCADQ9P266 1359 aa13.62□□□□□ -0.23
YIPF3-216ENST00000512713 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
YIPF3-216ENST00000512713 DCCP43146 1447 aa13.61□□□□□ -0.23
YIPF3-216ENST00000512713 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
YIPF3-216ENST00000512713 SPHKAPQ2M3C7 1700 aa13.6□□□□□ -0.23
YIPF3-216ENST00000512713 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
YIPF3-216ENST00000512713 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
YIPF3-216ENST00000512713 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
YIPF3-216ENST00000512713 ROBO1Q9Y6N7 1651 aa13.58□□□□□ -0.24
YIPF3-216ENST00000512713 SPATA31A6Q5VVP1 1343 aa13.58□□□□□ -0.24
YIPF3-216ENST00000512713 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.24
YIPF3-216ENST00000512713 CHD2O14647 1828 aaKnown RBP13.57□□□□□ -0.24
YIPF3-216ENST00000512713 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
YIPF3-216ENST00000512713 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
YIPF3-216ENST00000512713 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
YIPF3-216ENST00000512713 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
YIPF3-216ENST00000512713 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
YIPF3-216ENST00000512713 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
YIPF3-216ENST00000512713 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
YIPF3-216ENST00000512713 STK26Q9P289 416 aa13.54□□□□□ -0.24
YIPF3-216ENST00000512713 RAB3GAP2Q9H2M9 1393 aa13.54□□□□□ -0.24
YIPF3-216ENST00000512713 MST1RQ04912 1400 aa13.54□□□□□ -0.24
YIPF3-216ENST00000512713 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
YIPF3-216ENST00000512713 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
YIPF3-216ENST00000512713 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
YIPF3-216ENST00000512713 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
YIPF3-216ENST00000512713 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
YIPF3-216ENST00000512713 POTEAQ6S8J7 498 aa13.52□□□□□ -0.25
YIPF3-216ENST00000512713 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
YIPF3-216ENST00000512713 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
YIPF3-216ENST00000512713 HRCP23327 699 aa13.51□□□□□ -0.25
YIPF3-216ENST00000512713 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
YIPF3-216ENST00000512713 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-216ENST00000512713 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
YIPF3-216ENST00000512713 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
YIPF3-216ENST00000512713 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
YIPF3-216ENST00000512713 PRAG1Q86YV5 1406 aa13.49□□□□□ -0.25
YIPF3-216ENST00000512713 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
YIPF3-216ENST00000512713 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
YIPF3-216ENST00000512713 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
YIPF3-216ENST00000512713 AHDC1Q5TGY3 1603 aaPredicted RBP13.49□□□□□ -0.25
YIPF3-216ENST00000512713 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
YIPF3-216ENST00000512713 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
YIPF3-216ENST00000512713 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
YIPF3-216ENST00000512713 WAPLQ7Z5K2 1190 aa13.48□□□□□ -0.25
YIPF3-216ENST00000512713 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
YIPF3-216ENST00000512713 KIF1BO60333 1816 aa13.48□□□□□ -0.25
YIPF3-216ENST00000512713 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.25
YIPF3-216ENST00000512713 SIRT1Q96EB6 747 aa13.46□□□□□ -0.25
YIPF3-216ENST00000512713 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
YIPF3-216ENST00000512713 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
YIPF3-216ENST00000512713 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
YIPF3-216ENST00000512713 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms