RNA–Protein interactions for RNA: ENST00000512670.1

PDE6A-203, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 2,189 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-203ENST00000512670 RIMS2Q9UQ26 1411 aa15.56■□□□□ 0.08
PDE6A-203ENST00000512670 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
PDE6A-203ENST00000512670 IFT172Q9UG01 1749 aa15.55■□□□□ 0.08
PDE6A-203ENST00000512670 PPLO60437 1756 aa15.55■□□□□ 0.08
PDE6A-203ENST00000512670 TMEM2Q9UHN6 1383 aa15.55■□□□□ 0.08
PDE6A-203ENST00000512670 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
PDE6A-203ENST00000512670 NCKAP5LQ9HCH0 1330 aa15.53■□□□□ 0.08
PDE6A-203ENST00000512670 NBPF8Q3BBV2 869 aa15.53■□□□□ 0.08
PDE6A-203ENST00000512670 THEMISQ8N1K5 641 aaPredicted RBP15.53■□□□□ 0.08
PDE6A-203ENST00000512670 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
PDE6A-203ENST00000512670 KDM5AP29375 1690 aaKnown RBP15.52■□□□□ 0.07
PDE6A-203ENST00000512670 PPP1R15AO75807 674 aaPredicted RBP15.52■□□□□ 0.07
PDE6A-203ENST00000512670 TXNDC2Q86VQ3 553 aa15.52■□□□□ 0.07
PDE6A-203ENST00000512670 ARHGAP23Q9P227 1491 aa15.51■□□□□ 0.07
PDE6A-203ENST00000512670 SLIT1O75093 1534 aa15.5■□□□□ 0.07
PDE6A-203ENST00000512670 NEURL4Q96JN8 1562 aa15.5■□□□□ 0.07
PDE6A-203ENST00000512670 BCANQ96GW7 911 aa15.49■□□□□ 0.07
PDE6A-203ENST00000512670 SCAF11Q99590 1463 aaKnown RBP15.48■□□□□ 0.07
PDE6A-203ENST00000512670 IQGAP1P46940 1657 aa15.47■□□□□ 0.07
PDE6A-203ENST00000512670 PRAG1Q86YV5 1406 aa15.47■□□□□ 0.07
PDE6A-203ENST00000512670 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
PDE6A-203ENST00000512670 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
PDE6A-203ENST00000512670 NRXN3Q9Y4C0 1643 aa15.46■□□□□ 0.07
PDE6A-203ENST00000512670 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
PDE6A-203ENST00000512670 MYOM2P54296 1465 aa15.46■□□□□ 0.07
PDE6A-203ENST00000512670 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.07
PDE6A-203ENST00000512670 EID1Q9Y6B2 187 aa15.46■□□□□ 0.07
PDE6A-203ENST00000512670 STRCQ7RTU9 1775 aa15.46■□□□□ 0.07
PDE6A-203ENST00000512670 POLR1AO95602 1720 aaPredicted RBP15.46■□□□□ 0.06
PDE6A-203ENST00000512670 ANKLE2Q86XL3 938 aa15.45■□□□□ 0.06
PDE6A-203ENST00000512670 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
PDE6A-203ENST00000512670 PIK3C2GO75747 1445 aa15.45■□□□□ 0.06
PDE6A-203ENST00000512670 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
PDE6A-203ENST00000512670 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
PDE6A-203ENST00000512670 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
PDE6A-203ENST00000512670 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.42■□□□□ 0.06
PDE6A-203ENST00000512670 ADAMTS13Q76LX8 1427 aa15.42■□□□□ 0.06
PDE6A-203ENST00000512670 TRPM1Q7Z4N2 1603 aa15.42■□□□□ 0.06
PDE6A-203ENST00000512670 PLEKHG1Q9ULL1 1385 aa15.42■□□□□ 0.06
PDE6A-203ENST00000512670 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
PDE6A-203ENST00000512670 ALKQ9UM73 1620 aa15.41■□□□□ 0.06
PDE6A-203ENST00000512670 NPHP4O75161 1426 aaPredicted RBP15.41■□□□□ 0.06
PDE6A-203ENST00000512670 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
PDE6A-203ENST00000512670 METP08581 1390 aa15.4■□□□□ 0.06
PDE6A-203ENST00000512670 SETD1AO15047 1707 aaKnown RBP15.4■□□□□ 0.06
PDE6A-203ENST00000512670 SETBP1Q9Y6X0 1596 aa15.39■□□□□ 0.05
PDE6A-203ENST00000512670 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
PDE6A-203ENST00000512670 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
PDE6A-203ENST00000512670 C14orf93Q9H972 538 aaKnown RBP15.38■□□□□ 0.05
PDE6A-203ENST00000512670 STK26Q9P289 416 aa15.38■□□□□ 0.05
PDE6A-203ENST00000512670 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
PDE6A-203ENST00000512670 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
PDE6A-203ENST00000512670 RALGAPBQ86X10 1494 aa15.36■□□□□ 0.05
PDE6A-203ENST00000512670 MED14O60244 1454 aa15.36■□□□□ 0.05
PDE6A-203ENST00000512670 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
PDE6A-203ENST00000512670 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
PDE6A-203ENST00000512670 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
PDE6A-203ENST00000512670 PTPRUQ92729 1446 aa15.35■□□□□ 0.05
PDE6A-203ENST00000512670 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
PDE6A-203ENST00000512670 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
PDE6A-203ENST00000512670 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDE6A-203ENST00000512670 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
PDE6A-203ENST00000512670 LAMC1P11047 1609 aa15.32■□□□□ 0.04
PDE6A-203ENST00000512670 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
PDE6A-203ENST00000512670 ZNF335Q9H4Z2 1342 aaPredicted RBP15.31■□□□□ 0.04
PDE6A-203ENST00000512670 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
PDE6A-203ENST00000512670 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
PDE6A-203ENST00000512670 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
PDE6A-203ENST00000512670 KCNA6P17658 529 aa15.29■□□□□ 0.04
PDE6A-203ENST00000512670 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
PDE6A-203ENST00000512670 WAPLQ7Z5K2 1190 aa15.29■□□□□ 0.04
PDE6A-203ENST00000512670 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
PDE6A-203ENST00000512670 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
PDE6A-203ENST00000512670 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
PDE6A-203ENST00000512670 USP47Q96K76 1375 aa15.27■□□□□ 0.04
PDE6A-203ENST00000512670 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
PDE6A-203ENST00000512670 ARHGEF28Q8N1W1 1705 aaKnown RBP15.26■□□□□ 0.03
PDE6A-203ENST00000512670 CHD2O14647 1828 aaKnown RBP15.26■□□□□ 0.03
PDE6A-203ENST00000512670 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
PDE6A-203ENST00000512670 XRN1Q8IZH2 1706 aaKnown RBP15.26■□□□□ 0.03
PDE6A-203ENST00000512670 PRAM1Q96QH2 718 aa15.25■□□□□ 0.03
PDE6A-203ENST00000512670 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
PDE6A-203ENST00000512670 ST20-MTHFSA0A0A6YYL1 179 aa15.25■□□□□ 0.03
PDE6A-203ENST00000512670 ABCC11Q96J66 1382 aa15.21■□□□□ 0.03
PDE6A-203ENST00000512670 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
PDE6A-203ENST00000512670 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
PDE6A-203ENST00000512670 CPS1P31327 1500 aa15.21■□□□□ 0.03
PDE6A-203ENST00000512670 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.03
PDE6A-203ENST00000512670 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.02
PDE6A-203ENST00000512670 POGKQ9P215 609 aa15.21■□□□□ 0.02
PDE6A-203ENST00000512670 QRICH2Q9H0J4 1663 aa15.2■□□□□ 0.02
PDE6A-203ENST00000512670 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
PDE6A-203ENST00000512670 TECPR2O15040 1411 aa15.19■□□□□ 0.02
PDE6A-203ENST00000512670 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
PDE6A-203ENST00000512670 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
PDE6A-203ENST00000512670 CENPJQ9HC77 1338 aaPredicted RBP15.19■□□□□ 0.02
PDE6A-203ENST00000512670 C11orf95C9JLR9 678 aaPredicted RBP15.18■□□□□ 0.02
PDE6A-203ENST00000512670 PROSER2Q86WR7 435 aaPredicted RBP15.18■□□□□ 0.02
PDE6A-203ENST00000512670 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
PDE6A-203ENST00000512670 NUTM2FA1L443 756 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms