RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
SPOCK3-219ENST00000511905 NPC1L1Q9UHC9 1359 aa27.71■■■□□ 2.03
SPOCK3-219ENST00000511905 NRXN1Q9ULB1 1477 aa27.71■■■□□ 2.03
SPOCK3-219ENST00000511905 IFT172Q9UG01 1749 aa27.71■■■□□ 2.03
SPOCK3-219ENST00000511905 CNGB1Q14028 1251 aaPredicted RBP27.7■■■□□ 2.03
SPOCK3-219ENST00000511905 BLMP54132 1417 aaPredicted RBP27.7■■■□□ 2.02
SPOCK3-219ENST00000511905 CD109Q6YHK3 1445 aa27.7■■■□□ 2.02
SPOCK3-219ENST00000511905 PPRC1Q5VV67 1664 aaKnown RBP27.68■■■□□ 2.02
SPOCK3-219ENST00000511905 NEO1Q92859 1461 aa27.65■■■□□ 2.02
SPOCK3-219ENST00000511905 HECW2Q9P2P5 1572 aa27.65■■■□□ 2.02
SPOCK3-219ENST00000511905 MYT1LQ9UL68 1186 aa27.64■■■□□ 2.02
SPOCK3-219ENST00000511905 ADGRB3O60242 1522 aa27.63■■■□□ 2.01
SPOCK3-219ENST00000511905 ABCA6Q8N139 1617 aa27.62■■■□□ 2.01
SPOCK3-219ENST00000511905 SETBP1Q9Y6X0 1596 aa27.62■■■□□ 2.01
SPOCK3-219ENST00000511905 MYO3AQ8NEV4 1616 aa27.62■■■□□ 2.01
SPOCK3-219ENST00000511905 SBNO2Q9Y2G9 1366 aa27.61■■■□□ 2.01
SPOCK3-219ENST00000511905 FRMPD1Q5SYB0 1578 aa27.61■■■□□ 2.01
SPOCK3-219ENST00000511905 KNSTRNQ9Y448 316 aa27.6■■■□□ 2.01
SPOCK3-219ENST00000511905 ASXL1Q8IXJ9 1541 aa27.6■■■□□ 2.01
SPOCK3-219ENST00000511905 KDM5AP29375 1690 aaKnown RBP27.6■■■□□ 2.01
SPOCK3-219ENST00000511905 CC2D1BQ5T0F9 858 aaKnown RBP27.58■■■□□ 2.01
SPOCK3-219ENST00000511905 MYOM1P52179 1685 aa27.58■■■□□ 2.01
SPOCK3-219ENST00000511905 AMER1Q5JTC6 1135 aaPredicted RBP27.57■■■□□ 2
SPOCK3-219ENST00000511905 PIK3C2GO75747 1445 aa27.56■■■□□ 2
SPOCK3-219ENST00000511905 FANCIQ9NVI1 1328 aa27.56■■■□□ 2
SPOCK3-219ENST00000511905 RPGRIP1LQ68CZ1 1315 aa27.55■■■□□ 2
SPOCK3-219ENST00000511905 MROH2AA6NES4 1674 aa27.55■■■□□ 2
SPOCK3-219ENST00000511905 UGGT1Q9NYU2 1555 aa27.55■■■□□ 2
SPOCK3-219ENST00000511905 B4GALNT3Q6L9W6 998 aa27.53■■■□□ 2
SPOCK3-219ENST00000511905 NPATQ14207 1427 aa27.52■■■□□ 2
SPOCK3-219ENST00000511905 ADGRF5Q8IZF2 1346 aa27.51■■□□□ 1.99
SPOCK3-219ENST00000511905 ABCC3O15438 1527 aa27.51■■□□□ 1.99
SPOCK3-219ENST00000511905 ERVK-7P63135 1459 aa27.51■■□□□ 1.99
SPOCK3-219ENST00000511905 PPP2R1AP30153 589 aa27.5■■□□□ 1.99
SPOCK3-219ENST00000511905 CFAP70Q5T0N1 1121 aa27.5■■□□□ 1.99
SPOCK3-219ENST00000511905 PPLO60437 1756 aa27.49■■□□□ 1.99
SPOCK3-219ENST00000511905 RRP1P56182 461 aaKnown RBP27.48■■□□□ 1.99
SPOCK3-219ENST00000511905 RCAN3Q9UKA8 241 aa27.48■■□□□ 1.99
SPOCK3-219ENST00000511905 NOS1P29475 1434 aa27.47■■□□□ 1.99
SPOCK3-219ENST00000511905 ARHGAP31Q2M1Z3 1444 aa27.46■■□□□ 1.99
SPOCK3-219ENST00000511905 ANP32EQ9BTT0 268 aa27.45■■□□□ 1.99
SPOCK3-219ENST00000511905 CAMSAP1Q5T5Y3 1602 aa27.44■■□□□ 1.98
SPOCK3-219ENST00000511905 CCDC136Q96JN2 1154 aa27.44■■□□□ 1.98
SPOCK3-219ENST00000511905 ZC3H13Q5T200 1668 aaKnown RBP27.43■■□□□ 1.98
SPOCK3-219ENST00000511905 C14orf93Q9H972 538 aaKnown RBP27.43■■□□□ 1.98
SPOCK3-219ENST00000511905 PIK3C2BO00750 1634 aa27.43■■□□□ 1.98
SPOCK3-219ENST00000511905 DIP2CQ9Y2E4 1556 aa27.41■■□□□ 1.98
SPOCK3-219ENST00000511905 GLI2P10070 1586 aa27.4■■□□□ 1.98
SPOCK3-219ENST00000511905 PUS7Q96PZ0 661 aaKnown RBP27.4■■□□□ 1.98
SPOCK3-219ENST00000511905 ADGRB1O14514 1584 aa27.4■■□□□ 1.98
SPOCK3-219ENST00000511905 ADAMTS8Q9UP79 889 aa27.38■■□□□ 1.97
SPOCK3-219ENST00000511905 WDR43Q15061 677 aaKnown RBP eCLIP27.38■■□□□ 1.97
SPOCK3-219ENST00000511905 RICTORQ6R327 1708 aa27.37■■□□□ 1.97
SPOCK3-219ENST00000511905 NGEFQ8N5V2 710 aa27.37■■□□□ 1.97
SPOCK3-219ENST00000511905 CENPJQ9HC77 1338 aaPredicted RBP27.37■■□□□ 1.97
SPOCK3-219ENST00000511905 GGT6Q6P531 493 aa27.35■■□□□ 1.97
SPOCK3-219ENST00000511905 ZNF521Q96K83 1311 aa27.33■■□□□ 1.97
SPOCK3-219ENST00000511905 ZFYVE9O95405 1425 aa27.33■■□□□ 1.97
SPOCK3-219ENST00000511905 CDCA7LQ96GN5 454 aa27.3■■□□□ 1.96
SPOCK3-219ENST00000511905 USP32Q8NFA0 1604 aa27.3■■□□□ 1.96
SPOCK3-219ENST00000511905 SIGLEC1Q9BZZ2 1709 aa27.29■■□□□ 1.96
SPOCK3-219ENST00000511905 VGFO15240 615 aaPredicted RBP27.29■■□□□ 1.96
SPOCK3-219ENST00000511905 QRICH2Q9H0J4 1663 aa27.29■■□□□ 1.96
SPOCK3-219ENST00000511905 NEXMIFQ5QGS0 1516 aa27.28■■□□□ 1.96
SPOCK3-219ENST00000511905 CARD14Q9BXL6 1004 aa27.27■■□□□ 1.96
SPOCK3-219ENST00000511905 SLC52A1Q9NWF4 448 aa27.27■■□□□ 1.96
SPOCK3-219ENST00000511905 SALL2Q9Y467 1007 aaPredicted RBP27.27■■□□□ 1.96
SPOCK3-219ENST00000511905 POLR3AO14802 1390 aaPredicted RBP27.26■■□□□ 1.96
SPOCK3-219ENST00000511905 SENP3-EIF4A1A0A087X0R7 540 aa27.26■■□□□ 1.95
SPOCK3-219ENST00000511905 RAPGEF3O95398 923 aa27.25■■□□□ 1.95
SPOCK3-219ENST00000511905 CHGAP10645 457 aaKnown RBP27.25■■□□□ 1.95
SPOCK3-219ENST00000511905 PLEKHH1Q9ULM0 1364 aa27.23■■□□□ 1.95
SPOCK3-219ENST00000511905 EXOC6Q8TAG9 804 aa27.23■■□□□ 1.95
SPOCK3-219ENST00000511905 GOLGA2Q08379 1002 aa27.21■■□□□ 1.95
SPOCK3-219ENST00000511905 DUSP27Q5VZP5 1158 aa27.21■■□□□ 1.95
SPOCK3-219ENST00000511905 TRMT2AQ8IZ69 625 aaKnown RBP27.21■■□□□ 1.95
SPOCK3-219ENST00000511905 MSH5O43196 834 aa27.19■■□□□ 1.94
SPOCK3-219ENST00000511905 REREQ9P2R6 1566 aa27.18■■□□□ 1.94
SPOCK3-219ENST00000511905 TRAK1Q9UPV9 953 aa27.18■■□□□ 1.94
SPOCK3-219ENST00000511905 CFAP65Q6ZU64 1925 aaKnown RBP27.18■■□□□ 1.94
SPOCK3-219ENST00000511905 ARHGEF28Q8N1W1 1705 aaKnown RBP27.17■■□□□ 1.94
SPOCK3-219ENST00000511905 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
SPOCK3-219ENST00000511905 NSD2O96028 1365 aa27.16■■□□□ 1.94
SPOCK3-219ENST00000511905 TCERG1O14776 1098 aaKnown RBP27.16■■□□□ 1.94
SPOCK3-219ENST00000511905 PPP6R1Q9UPN7 881 aa27.16■■□□□ 1.94
SPOCK3-219ENST00000511905 NINLQ9Y2I6 1382 aa27.15■■□□□ 1.94
SPOCK3-219ENST00000511905 NSD3Q9BZ95 1437 aa27.15■■□□□ 1.94
SPOCK3-219ENST00000511905 EVC2Q86UK5 1308 aa27.14■■□□□ 1.94
SPOCK3-219ENST00000511905 PREX1Q8TCU6 1659 aa27.14■■□□□ 1.94
SPOCK3-219ENST00000511905 YEATS2Q9ULM3 1422 aa27.14■■□□□ 1.94
SPOCK3-219ENST00000511905 MS4A1P11836 297 aa27.13■■□□□ 1.93
SPOCK3-219ENST00000511905 NCBP3Q53F19 620 aaKnown RBP27.13■■□□□ 1.93
SPOCK3-219ENST00000511905 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.13■■□□□ 1.93
SPOCK3-219ENST00000511905 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
SPOCK3-219ENST00000511905 IDI1Q13907 227 aa27.11■■□□□ 1.93
SPOCK3-219ENST00000511905 AGLP35573 1532 aa27.11■■□□□ 1.93
SPOCK3-219ENST00000511905 ANKRD36BQ8N2N9 1353 aa27.1■■□□□ 1.93
SPOCK3-219ENST00000511905 TULP4Q9NRJ4 1543 aa27.09■■□□□ 1.93
SPOCK3-219ENST00000511905 TMEM132EQ6IEE7 984 aa27.09■■□□□ 1.93
SPOCK3-219ENST00000511905 CGNL1Q0VF96 1302 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms