RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 MLECQ14165 292 aa12.84□□□□□ -0.35
SUB1-209ENST00000511615 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
SUB1-209ENST00000511615 CEP152O94986 1710 aa12.84□□□□□ -0.35
SUB1-209ENST00000511615 PRAG1Q86YV5 1406 aa12.84□□□□□ -0.35
SUB1-209ENST00000511615 IDI1Q13907 227 aa12.83□□□□□ -0.35
SUB1-209ENST00000511615 CCDC184Q52MB2 194 aa12.83□□□□□ -0.35
SUB1-209ENST00000511615 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.35
SUB1-209ENST00000511615 SPHKAPQ2M3C7 1700 aa12.83□□□□□ -0.36
SUB1-209ENST00000511615 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
SUB1-209ENST00000511615 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
SUB1-209ENST00000511615 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
SUB1-209ENST00000511615 RALBP1Q15311 655 aa12.82□□□□□ -0.36
SUB1-209ENST00000511615 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
SUB1-209ENST00000511615 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
SUB1-209ENST00000511615 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
SUB1-209ENST00000511615 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
SUB1-209ENST00000511615 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
SUB1-209ENST00000511615 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
SUB1-209ENST00000511615 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
SUB1-209ENST00000511615 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
SUB1-209ENST00000511615 MYT1Q01538 1121 aa12.79□□□□□ -0.36
SUB1-209ENST00000511615 LAMC1P11047 1609 aa12.79□□□□□ -0.36
SUB1-209ENST00000511615 SYNMO15061 1565 aa12.79□□□□□ -0.36
SUB1-209ENST00000511615 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
SUB1-209ENST00000511615 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
SUB1-209ENST00000511615 CLTCQ00610 1675 aaKnown RBP12.76□□□□□ -0.37
SUB1-209ENST00000511615 UGGT1Q9NYU2 1555 aa12.76□□□□□ -0.37
SUB1-209ENST00000511615 BRD4O60885 1362 aaPredicted RBP12.76□□□□□ -0.37
SUB1-209ENST00000511615 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
SUB1-209ENST00000511615 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
SUB1-209ENST00000511615 MROH2AA6NES4 1674 aa12.76□□□□□ -0.37
SUB1-209ENST00000511615 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
SUB1-209ENST00000511615 PREX1Q8TCU6 1659 aa12.75□□□□□ -0.37
SUB1-209ENST00000511615 TMF1P82094 1093 aa12.74□□□□□ -0.37
SUB1-209ENST00000511615 MYOM2P54296 1465 aa12.74□□□□□ -0.37
SUB1-209ENST00000511615 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
SUB1-209ENST00000511615 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
SUB1-209ENST00000511615 PNISRQ8TF01 805 aaKnown RBP12.73□□□□□ -0.37
SUB1-209ENST00000511615 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
SUB1-209ENST00000511615 TNRQ92752 1358 aa12.73□□□□□ -0.37
SUB1-209ENST00000511615 SMG6Q86US8 1419 aaKnown RBP12.73□□□□□ -0.37
SUB1-209ENST00000511615 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
SUB1-209ENST00000511615 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
SUB1-209ENST00000511615 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
SUB1-209ENST00000511615 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
SUB1-209ENST00000511615 KIF1BO60333 1816 aa12.71□□□□□ -0.37
SUB1-209ENST00000511615 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.38
SUB1-209ENST00000511615 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.38
SUB1-209ENST00000511615 NLRP1Q9C000 1473 aa12.71□□□□□ -0.38
SUB1-209ENST00000511615 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
SUB1-209ENST00000511615 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
SUB1-209ENST00000511615 NLRP13Q86W25 1043 aa12.7□□□□□ -0.38
SUB1-209ENST00000511615 C14orf93Q9H972 538 aaKnown RBP12.7□□□□□ -0.38
SUB1-209ENST00000511615 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
SUB1-209ENST00000511615 TMEM131LA2VDJ0 1609 aa12.7□□□□□ -0.38
SUB1-209ENST00000511615 A2ML1A8K2U0 1454 aa12.7□□□□□ -0.38
SUB1-209ENST00000511615 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
SUB1-209ENST00000511615 TESK2Q96S53 571 aa12.69□□□□□ -0.38
SUB1-209ENST00000511615 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
SUB1-209ENST00000511615 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
SUB1-209ENST00000511615 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
SUB1-209ENST00000511615 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
SUB1-209ENST00000511615 PIK3C2GO75747 1445 aa12.67□□□□□ -0.38
SUB1-209ENST00000511615 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.67□□□□□ -0.38
SUB1-209ENST00000511615 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SUB1-209ENST00000511615 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
SUB1-209ENST00000511615 INSRP06213 1382 aa12.66□□□□□ -0.38
SUB1-209ENST00000511615 IRX6P78412 446 aaPredicted RBP12.66□□□□□ -0.38
SUB1-209ENST00000511615 EIF3AQ14152 1382 aaKnown RBP12.66□□□□□ -0.38
SUB1-209ENST00000511615 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
SUB1-209ENST00000511615 C3P01024 1663 aa12.65□□□□□ -0.38
SUB1-209ENST00000511615 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
SUB1-209ENST00000511615 PER1O15534 1290 aaPredicted RBP12.65□□□□□ -0.38
SUB1-209ENST00000511615 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
SUB1-209ENST00000511615 DISP3Q9P2K9 1392 aa12.65□□□□□ -0.38
SUB1-209ENST00000511615 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
SUB1-209ENST00000511615 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
SUB1-209ENST00000511615 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
SUB1-209ENST00000511615 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
SUB1-209ENST00000511615 THEMISQ8N1K5 641 aaPredicted RBP12.64□□□□□ -0.39
SUB1-209ENST00000511615 PANK3Q9H999 370 aa12.64□□□□□ -0.39
SUB1-209ENST00000511615 KIAA1210Q9ULL0 1709 aa12.63□□□□□ -0.39
SUB1-209ENST00000511615 PPLO60437 1756 aa12.63□□□□□ -0.39
SUB1-209ENST00000511615 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
SUB1-209ENST00000511615 SETD1BQ9UPS6 1966 aaKnown RBP12.62□□□□□ -0.39
SUB1-209ENST00000511615 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
SUB1-209ENST00000511615 PTPRMP28827 1452 aa12.61□□□□□ -0.39
SUB1-209ENST00000511615 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
SUB1-209ENST00000511615 ARHGAP23Q9P227 1491 aa12.61□□□□□ -0.39
SUB1-209ENST00000511615 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
SUB1-209ENST00000511615 RBM19Q9Y4C8 960 aaKnown RBP12.61□□□□□ -0.39
SUB1-209ENST00000511615 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
SUB1-209ENST00000511615 SLIT1O75093 1534 aa12.59□□□□□ -0.39
SUB1-209ENST00000511615 CC2D1BQ5T0F9 858 aaKnown RBP12.59□□□□□ -0.39
SUB1-209ENST00000511615 IQGAP1P46940 1657 aa12.58□□□□□ -0.39
SUB1-209ENST00000511615 ADGRB1O14514 1584 aa12.58□□□□□ -0.4
SUB1-209ENST00000511615 LTKP29376 864 aa12.58□□□□□ -0.4
SUB1-209ENST00000511615 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
SUB1-209ENST00000511615 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
SUB1-209ENST00000511615 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms