RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TMEM131LA2VDJ0 1609 aa18.06■□□□□ 0.48
HMGB2-205ENST00000511316 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
HMGB2-205ENST00000511316 ADGRB3O60242 1522 aa18.04■□□□□ 0.48
HMGB2-205ENST00000511316 ZFYVE9O95405 1425 aa18.03■□□□□ 0.48
HMGB2-205ENST00000511316 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
HMGB2-205ENST00000511316 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.48
HMGB2-205ENST00000511316 LTBP4Q8N2S1 1624 aa18.02■□□□□ 0.47
HMGB2-205ENST00000511316 CCER2I3L3R5 266 aa18.02■□□□□ 0.47
HMGB2-205ENST00000511316 ZNF335Q9H4Z2 1342 aaPredicted RBP18.02■□□□□ 0.47
HMGB2-205ENST00000511316 SCAF11Q99590 1463 aaKnown RBP18.01■□□□□ 0.47
HMGB2-205ENST00000511316 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
HMGB2-205ENST00000511316 TRPM2O94759 1503 aa18.01■□□□□ 0.47
HMGB2-205ENST00000511316 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
HMGB2-205ENST00000511316 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
HMGB2-205ENST00000511316 CLTCL1P53675 1640 aa17.99■□□□□ 0.47
HMGB2-205ENST00000511316 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
HMGB2-205ENST00000511316 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
HMGB2-205ENST00000511316 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
HMGB2-205ENST00000511316 RIMS2Q9UQ26 1411 aa17.97■□□□□ 0.47
HMGB2-205ENST00000511316 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
HMGB2-205ENST00000511316 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
HMGB2-205ENST00000511316 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
HMGB2-205ENST00000511316 ANKRD30BQ9BXX2 1392 aa17.93■□□□□ 0.46
HMGB2-205ENST00000511316 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
HMGB2-205ENST00000511316 NEFLP07196 543 aa17.91■□□□□ 0.46
HMGB2-205ENST00000511316 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
HMGB2-205ENST00000511316 HDGFP51858 240 aaKnown RBP17.9■□□□□ 0.46
HMGB2-205ENST00000511316 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
HMGB2-205ENST00000511316 ADAMTS13Q76LX8 1427 aa17.9■□□□□ 0.46
HMGB2-205ENST00000511316 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
HMGB2-205ENST00000511316 SENP3Q9H4L4 574 aaPredicted RBP17.89■□□□□ 0.45
HMGB2-205ENST00000511316 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
HMGB2-205ENST00000511316 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
HMGB2-205ENST00000511316 ANP32CO43423 234 aa17.88■□□□□ 0.45
HMGB2-205ENST00000511316 ILDR1Q86SU0 546 aaPredicted RBP17.88■□□□□ 0.45
HMGB2-205ENST00000511316 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
HMGB2-205ENST00000511316 CCDC144AA2RUR9 1427 aa17.87■□□□□ 0.45
HMGB2-205ENST00000511316 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
HMGB2-205ENST00000511316 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
HMGB2-205ENST00000511316 KIF1BO60333 1816 aa17.84■□□□□ 0.45
HMGB2-205ENST00000511316 KCNA6P17658 529 aa17.84■□□□□ 0.45
HMGB2-205ENST00000511316 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
HMGB2-205ENST00000511316 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
HMGB2-205ENST00000511316 RGL3Q3MIN7 710 aa17.84■□□□□ 0.45
HMGB2-205ENST00000511316 FBXO41Q8TF61 875 aa17.84■□□□□ 0.45
HMGB2-205ENST00000511316 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
HMGB2-205ENST00000511316 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
HMGB2-205ENST00000511316 CPS1P31327 1500 aa17.81■□□□□ 0.44
HMGB2-205ENST00000511316 IQSEC2Q5JU85 1478 aa17.81■□□□□ 0.44
HMGB2-205ENST00000511316 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
HMGB2-205ENST00000511316 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
HMGB2-205ENST00000511316 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
HMGB2-205ENST00000511316 PTPRUQ92729 1446 aa17.8■□□□□ 0.44
HMGB2-205ENST00000511316 METP08581 1390 aa17.8■□□□□ 0.44
HMGB2-205ENST00000511316 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
HMGB2-205ENST00000511316 BCANQ96GW7 911 aa17.79■□□□□ 0.44
HMGB2-205ENST00000511316 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
HMGB2-205ENST00000511316 RBM33Q96EV2 1170 aaKnown RBP17.77■□□□□ 0.43
HMGB2-205ENST00000511316 PPLO60437 1756 aa17.76■□□□□ 0.43
HMGB2-205ENST00000511316 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
HMGB2-205ENST00000511316 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
HMGB2-205ENST00000511316 ALKQ9UM73 1620 aa17.75■□□□□ 0.43
HMGB2-205ENST00000511316 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
HMGB2-205ENST00000511316 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
HMGB2-205ENST00000511316 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
HMGB2-205ENST00000511316 AMOTL2Q9Y2J4 779 aa17.74■□□□□ 0.43
HMGB2-205ENST00000511316 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
HMGB2-205ENST00000511316 XIRP1Q702N8 1843 aaKnown RBP17.73■□□□□ 0.43
HMGB2-205ENST00000511316 IFT172Q9UG01 1749 aa17.73■□□□□ 0.43
HMGB2-205ENST00000511316 TMEM94Q12767 1356 aa17.72■□□□□ 0.43
HMGB2-205ENST00000511316 NRXN1Q9ULB1 1477 aa17.72■□□□□ 0.43
HMGB2-205ENST00000511316 FKBP8Q14318 412 aa17.72■□□□□ 0.43
HMGB2-205ENST00000511316 PROSER2Q86WR7 435 aaPredicted RBP17.72■□□□□ 0.43
HMGB2-205ENST00000511316 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
HMGB2-205ENST00000511316 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
HMGB2-205ENST00000511316 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
HMGB2-205ENST00000511316 UBAP1LF5GYI3 381 aa17.69■□□□□ 0.42
HMGB2-205ENST00000511316 C14orf93Q9H972 538 aaKnown RBP17.69■□□□□ 0.42
HMGB2-205ENST00000511316 MYOM2P54296 1465 aa17.66■□□□□ 0.42
HMGB2-205ENST00000511316 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
HMGB2-205ENST00000511316 XRN1Q8IZH2 1706 aaKnown RBP17.66■□□□□ 0.42
HMGB2-205ENST00000511316 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
HMGB2-205ENST00000511316 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
HMGB2-205ENST00000511316 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
HMGB2-205ENST00000511316 TOM1O60784 492 aa17.64■□□□□ 0.41
HMGB2-205ENST00000511316 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
HMGB2-205ENST00000511316 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
HMGB2-205ENST00000511316 ROBO2Q9HCK4 1378 aa17.63■□□□□ 0.41
HMGB2-205ENST00000511316 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
HMGB2-205ENST00000511316 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
HMGB2-205ENST00000511316 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
HMGB2-205ENST00000511316 C19orf44Q9H6X5 657 aa17.61■□□□□ 0.41
HMGB2-205ENST00000511316 ABCC11Q96J66 1382 aa17.6■□□□□ 0.41
HMGB2-205ENST00000511316 PIP4K2BP78356 416 aa17.58■□□□□ 0.41
HMGB2-205ENST00000511316 TECPR2O15040 1411 aa17.58■□□□□ 0.41
HMGB2-205ENST00000511316 PTCH1Q13635 1447 aa17.58■□□□□ 0.41
HMGB2-205ENST00000511316 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.41
HMGB2-205ENST00000511316 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
HMGB2-205ENST00000511316 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
HMGB2-205ENST00000511316 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms