RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 TSPOAP1O95153 1857 aa12.81□□□□□ -0.36
POLR2J3-215ENST00000511313 ABCC1P33527 1531 aa12.81□□□□□ -0.36
POLR2J3-215ENST00000511313 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 MORC1Q86VD1 984 aa12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 CERKQ8TCT0 537 aa12.8□□□□□ -0.36
POLR2J3-215ENST00000511313 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
POLR2J3-215ENST00000511313 TRAK1Q9UPV9 953 aa12.79□□□□□ -0.36
POLR2J3-215ENST00000511313 IDI1Q13907 227 aa12.79□□□□□ -0.36
POLR2J3-215ENST00000511313 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
POLR2J3-215ENST00000511313 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
POLR2J3-215ENST00000511313 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
POLR2J3-215ENST00000511313 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.36
POLR2J3-215ENST00000511313 PDE3BQ13370 1112 aa12.77□□□□□ -0.36
POLR2J3-215ENST00000511313 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.36
POLR2J3-215ENST00000511313 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.37
POLR2J3-215ENST00000511313 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
POLR2J3-215ENST00000511313 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
POLR2J3-215ENST00000511313 PREX2Q70Z35 1606 aa12.77□□□□□ -0.37
POLR2J3-215ENST00000511313 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
POLR2J3-215ENST00000511313 HSPA2P54652 639 aa12.76□□□□□ -0.37
POLR2J3-215ENST00000511313 BRD4O60885 1362 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-215ENST00000511313 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
POLR2J3-215ENST00000511313 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
POLR2J3-215ENST00000511313 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
POLR2J3-215ENST00000511313 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
POLR2J3-215ENST00000511313 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-215ENST00000511313 ARHGAP31Q2M1Z3 1444 aa12.75□□□□□ -0.37
POLR2J3-215ENST00000511313 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
POLR2J3-215ENST00000511313 FBXO41Q8TF61 875 aa12.74□□□□□ -0.37
POLR2J3-215ENST00000511313 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
POLR2J3-215ENST00000511313 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-215ENST00000511313 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
POLR2J3-215ENST00000511313 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 PZPP20742 1482 aa12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 NUTM2BA6NNL0 878 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 NUTM2EB1AL46 878 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-215ENST00000511313 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 PTPRTO14522 1441 aa12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
POLR2J3-215ENST00000511313 ADGBQ8N7X0 1667 aa12.71□□□□□ -0.37
POLR2J3-215ENST00000511313 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
POLR2J3-215ENST00000511313 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.37
POLR2J3-215ENST00000511313 PTPRMP28827 1452 aa12.71□□□□□ -0.38
POLR2J3-215ENST00000511313 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
POLR2J3-215ENST00000511313 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-215ENST00000511313 MS4A1P11836 297 aa12.69□□□□□ -0.38
POLR2J3-215ENST00000511313 TRPM2O94759 1503 aa12.69□□□□□ -0.38
POLR2J3-215ENST00000511313 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
POLR2J3-215ENST00000511313 NLRP6P59044 892 aa12.68□□□□□ -0.38
POLR2J3-215ENST00000511313 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
POLR2J3-215ENST00000511313 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
POLR2J3-215ENST00000511313 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-215ENST00000511313 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
POLR2J3-215ENST00000511313 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
POLR2J3-215ENST00000511313 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
POLR2J3-215ENST00000511313 DNMT1P26358 1616 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-215ENST00000511313 TTC21AQ8NDW8 1320 aa12.66□□□□□ -0.38
POLR2J3-215ENST00000511313 NCOA3Q9Y6Q9 1424 aa12.66□□□□□ -0.38
POLR2J3-215ENST00000511313 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-215ENST00000511313 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-215ENST00000511313 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
POLR2J3-215ENST00000511313 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-215ENST00000511313 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-215ENST00000511313 RALBP1Q15311 655 aa12.65□□□□□ -0.38
POLR2J3-215ENST00000511313 KRT28Q7Z3Y7 464 aa12.65□□□□□ -0.38
POLR2J3-215ENST00000511313 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
POLR2J3-215ENST00000511313 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.39
POLR2J3-215ENST00000511313 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
POLR2J3-215ENST00000511313 ARHGEF12Q9NZN5 1544 aa12.64□□□□□ -0.39
POLR2J3-215ENST00000511313 NAIPQ13075 1403 aa12.63□□□□□ -0.39
POLR2J3-215ENST00000511313 EIF2AK4Q9P2K8 1649 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-215ENST00000511313 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
POLR2J3-215ENST00000511313 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-215ENST00000511313 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
POLR2J3-215ENST00000511313 SLAIN2Q9P270 581 aa12.62□□□□□ -0.39
POLR2J3-215ENST00000511313 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
POLR2J3-215ENST00000511313 ARXQ96QS3 562 aa12.62□□□□□ -0.39
POLR2J3-215ENST00000511313 ERVK-7P63135 1459 aa12.62□□□□□ -0.39
POLR2J3-215ENST00000511313 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
POLR2J3-215ENST00000511313 TOM1L2Q6ZVM7 507 aa12.61□□□□□ -0.39
POLR2J3-215ENST00000511313 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
POLR2J3-215ENST00000511313 KDM5CP41229 1560 aa12.61□□□□□ -0.39
POLR2J3-215ENST00000511313 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
POLR2J3-215ENST00000511313 REREQ9P2R6 1566 aa12.61□□□□□ -0.39
POLR2J3-215ENST00000511313 WASLO00401 505 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-215ENST00000511313 CDK19Q9BWU1 502 aa12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms