RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 VPS9D1Q9Y2B5 631 aa14.24□□□□□ -0.13
LINC01088-207ENST00000511241 SSTR3P32745 418 aaPredicted RBP14.23□□□□□ -0.13
LINC01088-207ENST00000511241 MS4A1P11836 297 aa14.22□□□□□ -0.13
LINC01088-207ENST00000511241 NLRP7Q8WX94 980 aa14.22□□□□□ -0.13
LINC01088-207ENST00000511241 FAM217BQ9NTX9 383 aaPredicted RBP14.22□□□□□ -0.13
LINC01088-207ENST00000511241 SMAPO00193 183 aa14.2□□□□□ -0.14
LINC01088-207ENST00000511241 TMEM134Q9H6X4 195 aa14.2□□□□□ -0.14
LINC01088-207ENST00000511241 LAPTM4BQ86VI4 370 aa14.18□□□□□ -0.14
LINC01088-207ENST00000511241 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
LINC01088-207ENST00000511241 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
LINC01088-207ENST00000511241 LSM11P83369 360 aaKnown RBP eCLIP14.17□□□□□ -0.144e-6■■■■■ 28.9
LINC01088-207ENST00000511241 SULF1Q8IWU6 871 aa14.16□□□□□ -0.14
LINC01088-207ENST00000511241 FAM98CQ17RN3 349 aaKnown RBP14.15□□□□□ -0.14
LINC01088-207ENST00000511241 BHMG1C9JSJ3 638 aaPredicted RBP14.14□□□□□ -0.15
LINC01088-207ENST00000511241 HDGFP51858 240 aaKnown RBP14.14□□□□□ -0.15
LINC01088-207ENST00000511241 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
LINC01088-207ENST00000511241 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
LINC01088-207ENST00000511241 ADGRD1Q6QNK2 874 aa14.13□□□□□ -0.15
LINC01088-207ENST00000511241 BEGAINQ9BUH8 593 aa14.13□□□□□ -0.15
LINC01088-207ENST00000511241 GOPCQ9HD26 462 aa14.13□□□□□ -0.15
LINC01088-207ENST00000511241 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
LINC01088-207ENST00000511241 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
LINC01088-207ENST00000511241 CD46P15529 392 aa14.09□□□□□ -0.15
LINC01088-207ENST00000511241 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
LINC01088-207ENST00000511241 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
LINC01088-207ENST00000511241 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
LINC01088-207ENST00000511241 DDX11L8A8MPP1 907 aa14.08□□□□□ -0.16
LINC01088-207ENST00000511241 DIXDC1Q155Q3 683 aa14.08□□□□□ -0.16
LINC01088-207ENST00000511241 MRPL50Q8N5N7 158 aaKnown RBP14.08□□□□□ -0.16
LINC01088-207ENST00000511241 HRO43593 1189 aa14.07□□□□□ -0.16
LINC01088-207ENST00000511241 SWT1Q5T5J6 900 aaKnown RBP14.07□□□□□ -0.16
LINC01088-207ENST00000511241 ANKRD13DQ6ZTN6 518 aa14.06□□□□□ -0.16
LINC01088-207ENST00000511241 SH3D19Q5HYK7 790 aa14.05□□□□□ -0.16
LINC01088-207ENST00000511241 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
LINC01088-207ENST00000511241 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
LINC01088-207ENST00000511241 ZFRQ96KR1 1074 aaKnown RBP14.04□□□□□ -0.16
LINC01088-207ENST00000511241 SLF2Q8IX21 1173 aa14.03□□□□□ -0.16
LINC01088-207ENST00000511241 SAMD7Q7Z3H4 446 aa14.02□□□□□ -0.17
LINC01088-207ENST00000511241 RDH13Q8NBN7 331 aa14.02□□□□□ -0.17
LINC01088-207ENST00000511241 SKIV2LQ15477 1246 aaKnown RBP14.01□□□□□ -0.17
LINC01088-207ENST00000511241 PCMTD1Q96MG8 357 aaPredicted RBP14.01□□□□□ -0.17
LINC01088-207ENST00000511241 NUTM1Q86Y26 1132 aa13.99□□□□□ -0.17
LINC01088-207ENST00000511241 NECTIN2Q92692 538 aa13.99□□□□□ -0.17
LINC01088-207ENST00000511241 KRTAP3-3Q9BYR6 98 aa13.99□□□□□ -0.17
LINC01088-207ENST00000511241 KRTAP3-2Q9BYR7 98 aa13.99□□□□□ -0.17
LINC01088-207ENST00000511241 TBC1D2Q9BYX2 928 aa13.99□□□□□ -0.17
LINC01088-207ENST00000511241 GOLGA8CPA6NN73 597 aa13.98□□□□□ -0.17
LINC01088-207ENST00000511241 SMARCA2P51531 1590 aa13.97□□□□□ -0.17
LINC01088-207ENST00000511241 GCGRP47871 477 aa13.97□□□□□ -0.17
LINC01088-207ENST00000511241 MYSM1Q5VVJ2 828 aa13.97□□□□□ -0.17
LINC01088-207ENST00000511241 SPIRE2Q8WWL2 714 aa13.97□□□□□ -0.17
LINC01088-207ENST00000511241 SLC10A3P09131 477 aa13.96□□□□□ -0.17
LINC01088-207ENST00000511241 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
LINC01088-207ENST00000511241 LRCH3Q96II8 777 aa13.96□□□□□ -0.17
LINC01088-207ENST00000511241 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.18
LINC01088-207ENST00000511241 ERICH6Q7L0X2 663 aa13.95□□□□□ -0.18
LINC01088-207ENST00000511241 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-207ENST00000511241 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-207ENST00000511241 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
LINC01088-207ENST00000511241 NESP48681 1621 aa13.94□□□□□ -0.18
LINC01088-207ENST00000511241 POTEMA6NI47 508 aa13.94□□□□□ -0.18
LINC01088-207ENST00000511241 USP46P62068 366 aa13.94□□□□□ -0.18
LINC01088-207ENST00000511241 ANKK1Q8NFD2 765 aa13.94□□□□□ -0.18
LINC01088-207ENST00000511241 KDM4AO75164 1064 aa13.93□□□□□ -0.18
LINC01088-207ENST00000511241 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
LINC01088-207ENST00000511241 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
LINC01088-207ENST00000511241 GJA5P36382 358 aa13.91□□□□□ -0.18
LINC01088-207ENST00000511241 CLK2P49760 499 aaKnown RBP13.91□□□□□ -0.18
LINC01088-207ENST00000511241 CDAN1Q8IWY9 1227 aa13.91□□□□□ -0.18
LINC01088-207ENST00000511241 POLR3EQ9NVU0 708 aa13.91□□□□□ -0.18
LINC01088-207ENST00000511241 RNF40O75150 1001 aa13.9□□□□□ -0.18
LINC01088-207ENST00000511241 SOWAHBA6NEL2 793 aa13.89□□□□□ -0.19
LINC01088-207ENST00000511241 TUSC1Q2TAM9 212 aa13.89□□□□□ -0.19
LINC01088-207ENST00000511241 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
LINC01088-207ENST00000511241 SPTLC1O15269 473 aa13.88□□□□□ -0.19
LINC01088-207ENST00000511241 KMT5BQ4FZB7 885 aa13.88□□□□□ -0.19
LINC01088-207ENST00000511241 WNT2BQ93097 391 aa13.88□□□□□ -0.19
LINC01088-207ENST00000511241 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
LINC01088-207ENST00000511241 CFHP08603 1231 aa13.87□□□□□ -0.19
LINC01088-207ENST00000511241 GRIPAP1Q4V328 841 aa13.87□□□□□ -0.19
LINC01088-207ENST00000511241 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
LINC01088-207ENST00000511241 MOXD2PA6NHM9 499 aa13.86□□□□□ -0.19
LINC01088-207ENST00000511241 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
LINC01088-207ENST00000511241 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
LINC01088-207ENST00000511241 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC01088-207ENST00000511241 PRR14Q9BWN1 585 aa13.86□□□□□ -0.19
LINC01088-207ENST00000511241 PPP4CP60510 307 aa13.85□□□□□ -0.19
LINC01088-207ENST00000511241 HOXA2O43364 376 aa13.84□□□□□ -0.19
LINC01088-207ENST00000511241 LIMD1Q9UGP4 676 aa13.84□□□□□ -0.19
LINC01088-207ENST00000511241 TSR3Q9UJK0 312 aaKnown RBP13.84□□□□□ -0.19
LINC01088-207ENST00000511241 CUX2O14529 1486 aa13.82□□□□□ -0.2
LINC01088-207ENST00000511241 HPS5Q9UPZ3 1129 aa13.82□□□□□ -0.2
LINC01088-207ENST00000511241 NDUFV2P19404 249 aa13.81□□□□□ -0.2
LINC01088-207ENST00000511241 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
LINC01088-207ENST00000511241 BCAMP50895 628 aa13.81□□□□□ -0.2
LINC01088-207ENST00000511241 FUT2Q10981 343 aa13.81□□□□□ -0.2
LINC01088-207ENST00000511241 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
LINC01088-207ENST00000511241 FDX1P10109 184 aa13.79□□□□□ -0.2
LINC01088-207ENST00000511241 PPP2R2DQ66LE6 453 aa13.79□□□□□ -0.2
LINC01088-207ENST00000511241 PRPF38BQ5VTL8 546 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms