RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
CLDND1-223ENST00000511081 HFM1A2PYH4 1435 aa18.37■□□□□ 0.53
CLDND1-223ENST00000511081 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
CLDND1-223ENST00000511081 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
CLDND1-223ENST00000511081 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
CLDND1-223ENST00000511081 TOM1O60784 492 aa18.35■□□□□ 0.53
CLDND1-223ENST00000511081 RIMS2Q9UQ26 1411 aa18.33■□□□□ 0.53
CLDND1-223ENST00000511081 KCNA6P17658 529 aa18.33■□□□□ 0.52
CLDND1-223ENST00000511081 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLDND1-223ENST00000511081 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.52
CLDND1-223ENST00000511081 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
CLDND1-223ENST00000511081 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
CLDND1-223ENST00000511081 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
CLDND1-223ENST00000511081 CHGAP10645 457 aaKnown RBP18.29■□□□□ 0.52
CLDND1-223ENST00000511081 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
CLDND1-223ENST00000511081 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
CLDND1-223ENST00000511081 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
CLDND1-223ENST00000511081 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
CLDND1-223ENST00000511081 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-223ENST00000511081 PIP4K2BP78356 416 aa18.24■□□□□ 0.51
CLDND1-223ENST00000511081 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
CLDND1-223ENST00000511081 TRPM2O94759 1503 aa18.23■□□□□ 0.51
CLDND1-223ENST00000511081 CHD2O14647 1828 aaKnown RBP18.23■□□□□ 0.51
CLDND1-223ENST00000511081 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
CLDND1-223ENST00000511081 BCANQ96GW7 911 aa18.23■□□□□ 0.51
CLDND1-223ENST00000511081 NKTRP30414 1462 aaKnown RBP18.22■□□□□ 0.51
CLDND1-223ENST00000511081 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
CLDND1-223ENST00000511081 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
CLDND1-223ENST00000511081 HSPA1LP34931 641 aa18.22■□□□□ 0.51
CLDND1-223ENST00000511081 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
CLDND1-223ENST00000511081 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-223ENST00000511081 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
CLDND1-223ENST00000511081 ACIN1Q9UKV3 1341 aaKnown RBP18.2■□□□□ 0.5
CLDND1-223ENST00000511081 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
CLDND1-223ENST00000511081 NCOA3Q9Y6Q9 1424 aa18.17■□□□□ 0.5
CLDND1-223ENST00000511081 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
CLDND1-223ENST00000511081 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
CLDND1-223ENST00000511081 KIF1BO60333 1816 aa18.16■□□□□ 0.5
CLDND1-223ENST00000511081 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
CLDND1-223ENST00000511081 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
CLDND1-223ENST00000511081 SETBP1Q9Y6X0 1596 aa18.15■□□□□ 0.5
CLDND1-223ENST00000511081 NEXMIFQ5QGS0 1516 aa18.14■□□□□ 0.49
CLDND1-223ENST00000511081 NRXN3Q9Y4C0 1643 aa18.14■□□□□ 0.49
CLDND1-223ENST00000511081 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
CLDND1-223ENST00000511081 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
CLDND1-223ENST00000511081 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
CLDND1-223ENST00000511081 DISP3Q9P2K9 1392 aa18.13■□□□□ 0.49
CLDND1-223ENST00000511081 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
CLDND1-223ENST00000511081 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
CLDND1-223ENST00000511081 MSH6P52701 1360 aa18.1■□□□□ 0.49
CLDND1-223ENST00000511081 METP08581 1390 aa18.09■□□□□ 0.49
CLDND1-223ENST00000511081 SLAIN2Q9P270 581 aa18.09■□□□□ 0.49
CLDND1-223ENST00000511081 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
CLDND1-223ENST00000511081 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
CLDND1-223ENST00000511081 HRCP23327 699 aa18.07■□□□□ 0.48
CLDND1-223ENST00000511081 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
CLDND1-223ENST00000511081 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
CLDND1-223ENST00000511081 ILDR2Q71H61 639 aa18.05■□□□□ 0.48
CLDND1-223ENST00000511081 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
CLDND1-223ENST00000511081 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
CLDND1-223ENST00000511081 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
CLDND1-223ENST00000511081 PPLO60437 1756 aa18.03■□□□□ 0.48
CLDND1-223ENST00000511081 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
CLDND1-223ENST00000511081 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
CLDND1-223ENST00000511081 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
CLDND1-223ENST00000511081 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
CLDND1-223ENST00000511081 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
CLDND1-223ENST00000511081 DCCP43146 1447 aa17.99■□□□□ 0.47
CLDND1-223ENST00000511081 ATF3P18847 181 aa17.99■□□□□ 0.47
CLDND1-223ENST00000511081 RGL3Q3MIN7 710 aa17.99■□□□□ 0.47
CLDND1-223ENST00000511081 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
CLDND1-223ENST00000511081 ANKRD30BQ9BXX2 1392 aa17.99■□□□□ 0.47
CLDND1-223ENST00000511081 ADGRF5Q8IZF2 1346 aa17.98■□□□□ 0.47
CLDND1-223ENST00000511081 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
CLDND1-223ENST00000511081 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
CLDND1-223ENST00000511081 ADGRL3Q9HAR2 1447 aa17.94■□□□□ 0.46
CLDND1-223ENST00000511081 ROBO2Q9HCK4 1378 aa17.93■□□□□ 0.46
CLDND1-223ENST00000511081 BRINP3Q76B58 766 aa17.92■□□□□ 0.46
CLDND1-223ENST00000511081 MST1RQ04912 1400 aa17.91■□□□□ 0.46
CLDND1-223ENST00000511081 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
CLDND1-223ENST00000511081 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
CLDND1-223ENST00000511081 SOCS7O14512 581 aa17.9■□□□□ 0.46
CLDND1-223ENST00000511081 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-223ENST00000511081 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
CLDND1-223ENST00000511081 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
CLDND1-223ENST00000511081 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-223ENST00000511081 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
CLDND1-223ENST00000511081 JCADQ9P266 1359 aa17.89■□□□□ 0.45
CLDND1-223ENST00000511081 NALCNQ8IZF0 1738 aa17.88■□□□□ 0.45
CLDND1-223ENST00000511081 TECPR2O15040 1411 aa17.88■□□□□ 0.45
CLDND1-223ENST00000511081 SIRT1Q96EB6 747 aa17.87■□□□□ 0.45
CLDND1-223ENST00000511081 RGS17Q9UGC6 210 aaPredicted RBP17.87■□□□□ 0.45
CLDND1-223ENST00000511081 LRPPRCP42704 1394 aaKnown RBP17.87■□□□□ 0.45
CLDND1-223ENST00000511081 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
CLDND1-223ENST00000511081 MYOM2P54296 1465 aa17.86■□□□□ 0.45
CLDND1-223ENST00000511081 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
CLDND1-223ENST00000511081 ASXL1Q8IXJ9 1541 aa17.84■□□□□ 0.45
CLDND1-223ENST00000511081 C1orf167Q5SNV9 1468 aa17.84■□□□□ 0.45
CLDND1-223ENST00000511081 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
CLDND1-223ENST00000511081 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms