RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 CUX1P39880 1505 aa17.72■□□□□ 0.43
PRDM16-206ENST00000511072 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
PRDM16-206ENST00000511072 FYCO1Q9BQS8 1478 aa17.72■□□□□ 0.43
PRDM16-206ENST00000511072 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
PRDM16-206ENST00000511072 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
PRDM16-206ENST00000511072 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
PRDM16-206ENST00000511072 SLC12A5Q9H2X9 1139 aa17.71■□□□□ 0.43
PRDM16-206ENST00000511072 EIF2S2P20042 333 aaKnown RBP17.7■□□□□ 0.42
PRDM16-206ENST00000511072 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
PRDM16-206ENST00000511072 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
PRDM16-206ENST00000511072 ERICH3Q5RHP9 1530 aa17.69■□□□□ 0.42
PRDM16-206ENST00000511072 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
PRDM16-206ENST00000511072 GOLGA6L3A6NEY3 463 aa17.69■□□□□ 0.42
PRDM16-206ENST00000511072 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
PRDM16-206ENST00000511072 RILPL2Q969X0 211 aa17.69■□□□□ 0.42
PRDM16-206ENST00000511072 RRAGDQ9NQL2 400 aaPredicted RBP17.69■□□□□ 0.42
PRDM16-206ENST00000511072 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
PRDM16-206ENST00000511072 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
PRDM16-206ENST00000511072 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
PRDM16-206ENST00000511072 NUTM2GQ5VZR2 741 aa17.68■□□□□ 0.42
PRDM16-206ENST00000511072 TCP11L2Q8N4U5 519 aa17.68■□□□□ 0.42
PRDM16-206ENST00000511072 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
PRDM16-206ENST00000511072 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
PRDM16-206ENST00000511072 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
PRDM16-206ENST00000511072 MSNP26038 577 aaKnown RBP17.66■□□□□ 0.42
PRDM16-206ENST00000511072 TEFQ10587 303 aa17.65■□□□□ 0.42
PRDM16-206ENST00000511072 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
PRDM16-206ENST00000511072 TOPBP1Q92547 1522 aa17.64■□□□□ 0.42
PRDM16-206ENST00000511072 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
PRDM16-206ENST00000511072 PNISRQ8TF01 805 aaKnown RBP17.64■□□□□ 0.41
PRDM16-206ENST00000511072 ISY1Q9ULR0 285 aaKnown RBP17.64■□□□□ 0.41
PRDM16-206ENST00000511072 DRC7Q8IY82 874 aa17.64■□□□□ 0.41
PRDM16-206ENST00000511072 TAF7LQ5H9L4 462 aa17.63■□□□□ 0.41
PRDM16-206ENST00000511072 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
PRDM16-206ENST00000511072 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
PRDM16-206ENST00000511072 RAPGEF3O95398 923 aa17.61■□□□□ 0.41
PRDM16-206ENST00000511072 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
PRDM16-206ENST00000511072 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
PRDM16-206ENST00000511072 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
PRDM16-206ENST00000511072 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
PRDM16-206ENST00000511072 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
PRDM16-206ENST00000511072 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
PRDM16-206ENST00000511072 BCAR3O75815 825 aa17.59■□□□□ 0.41
PRDM16-206ENST00000511072 C9orf84Q5VXU9 1444 aa17.58■□□□□ 0.41
PRDM16-206ENST00000511072 NAIPQ13075 1403 aa17.58■□□□□ 0.4
PRDM16-206ENST00000511072 MIA2Q96PC5 1412 aa17.58■□□□□ 0.4
PRDM16-206ENST00000511072 FAM13BQ9NYF5 915 aa17.58■□□□□ 0.4
PRDM16-206ENST00000511072 ARHGAP5Q13017 1502 aa17.58■□□□□ 0.4
PRDM16-206ENST00000511072 ST18O60284 1047 aa17.58■□□□□ 0.4
PRDM16-206ENST00000511072 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
PRDM16-206ENST00000511072 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
PRDM16-206ENST00000511072 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
PRDM16-206ENST00000511072 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
PRDM16-206ENST00000511072 TROQ12816 1431 aaPredicted RBP17.56■□□□□ 0.4
PRDM16-206ENST00000511072 PSME1Q06323 249 aa17.56■□□□□ 0.4
PRDM16-206ENST00000511072 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
PRDM16-206ENST00000511072 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
PRDM16-206ENST00000511072 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
PRDM16-206ENST00000511072 NLRP6P59044 892 aa17.55■□□□□ 0.4
PRDM16-206ENST00000511072 PRKAR2BP31323 418 aa17.55■□□□□ 0.4
PRDM16-206ENST00000511072 SYNJ2O15056 1496 aa17.54■□□□□ 0.4
PRDM16-206ENST00000511072 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
PRDM16-206ENST00000511072 TXNDC2Q86VQ3 553 aa17.54■□□□□ 0.4
PRDM16-206ENST00000511072 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
PRDM16-206ENST00000511072 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
PRDM16-206ENST00000511072 DDX49Q9Y6V7 483 aaKnown RBP17.54■□□□□ 0.4
PRDM16-206ENST00000511072 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
PRDM16-206ENST00000511072 TIAM1Q13009 1591 aa17.54■□□□□ 0.4
PRDM16-206ENST00000511072 PDE4CQ08493 712 aa17.54■□□□□ 0.4
PRDM16-206ENST00000511072 TSPYL4Q9UJ04 414 aa17.54■□□□□ 0.4
PRDM16-206ENST00000511072 NRDCO43847 1150 aa17.53■□□□□ 0.4
PRDM16-206ENST00000511072 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
PRDM16-206ENST00000511072 TOMM22Q9NS69 142 aa17.53■□□□□ 0.4
PRDM16-206ENST00000511072 CABP1Q9NZU7 370 aa17.52■□□□□ 0.39
PRDM16-206ENST00000511072 GNAI1P63096 354 aa17.51■□□□□ 0.39
PRDM16-206ENST00000511072 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
PRDM16-206ENST00000511072 GOLGA6L6A8MZA4 724 aa17.51■□□□□ 0.39
PRDM16-206ENST00000511072 GTF2E1P29083 439 aaPredicted RBP17.5■□□□□ 0.39
PRDM16-206ENST00000511072 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
PRDM16-206ENST00000511072 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
PRDM16-206ENST00000511072 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
PRDM16-206ENST00000511072 KIF16BQ96L93 1317 aa17.5■□□□□ 0.39
PRDM16-206ENST00000511072 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
PRDM16-206ENST00000511072 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
PRDM16-206ENST00000511072 CHAF1AQ13111 956 aaPredicted RBP17.49■□□□□ 0.39
PRDM16-206ENST00000511072 PANK2Q9BZ23 570 aa17.49■□□□□ 0.39
PRDM16-206ENST00000511072 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
PRDM16-206ENST00000511072 DAPK1P53355 1430 aa17.49■□□□□ 0.39
PRDM16-206ENST00000511072 KIAA2012Q0VF49 1180 aa17.47■□□□□ 0.39
PRDM16-206ENST00000511072 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
PRDM16-206ENST00000511072 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
PRDM16-206ENST00000511072 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
PRDM16-206ENST00000511072 DIAPH3Q9NSV4 1193 aa17.47■□□□□ 0.39
PRDM16-206ENST00000511072 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
PRDM16-206ENST00000511072 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
PRDM16-206ENST00000511072 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
PRDM16-206ENST00000511072 TTC5Q8N0Z6 440 aa17.46■□□□□ 0.39
PRDM16-206ENST00000511072 EFCAB5A4FU69 1503 aa17.45■□□□□ 0.38
PRDM16-206ENST00000511072 EVA1CP58658 441 aa17.45■□□□□ 0.38
PRDM16-206ENST00000511072 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms