RNA–Protein interactions for RNA: ENST00000510024.5

SEMA6A-209, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-209ENST00000510024 MS4A1P11836 297 aa10.23□□□□□ -0.77
SEMA6A-209ENST00000510024 SSTR3P32745 418 aaPredicted RBP10.22□□□□□ -0.77
SEMA6A-209ENST00000510024 TMEM132AQ24JP5 1023 aa10.22□□□□□ -0.77
SEMA6A-209ENST00000510024 MRPL50Q8N5N7 158 aaKnown RBP10.22□□□□□ -0.77
SEMA6A-209ENST00000510024 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
SEMA6A-209ENST00000510024 ZFRQ96KR1 1074 aaKnown RBP10.21□□□□□ -0.77
SEMA6A-209ENST00000510024 FAM117AQ9C073 453 aa10.21□□□□□ -0.77
SEMA6A-209ENST00000510024 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
SEMA6A-209ENST00000510024 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
SEMA6A-209ENST00000510024 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
SEMA6A-209ENST00000510024 CD46P15529 392 aa10.18□□□□□ -0.78
SEMA6A-209ENST00000510024 SAMD7Q7Z3H4 446 aa10.17□□□□□ -0.78
SEMA6A-209ENST00000510024 HDGFP51858 240 aaKnown RBP10.16□□□□□ -0.78
SEMA6A-209ENST00000510024 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
SEMA6A-209ENST00000510024 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
SEMA6A-209ENST00000510024 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
SEMA6A-209ENST00000510024 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
SEMA6A-209ENST00000510024 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
SEMA6A-209ENST00000510024 BEGAINQ9BUH8 593 aa10.14□□□□□ -0.79
SEMA6A-209ENST00000510024 SLC10A3P09131 477 aa10.13□□□□□ -0.79
SEMA6A-209ENST00000510024 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
SEMA6A-209ENST00000510024 LRCH3Q96II8 777 aa10.12□□□□□ -0.79
SEMA6A-209ENST00000510024 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
SEMA6A-209ENST00000510024 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
SEMA6A-209ENST00000510024 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
SEMA6A-209ENST00000510024 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
SEMA6A-209ENST00000510024 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.11□□□□□ -0.79
SEMA6A-209ENST00000510024 GOLGA8CPA6NN73 597 aa10.1□□□□□ -0.79
SEMA6A-209ENST00000510024 GCGRP47871 477 aa10.1□□□□□ -0.79
SEMA6A-209ENST00000510024 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
SEMA6A-209ENST00000510024 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
SEMA6A-209ENST00000510024 WNT2BQ93097 391 aa10.09□□□□□ -0.79
SEMA6A-209ENST00000510024 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
SEMA6A-209ENST00000510024 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
SEMA6A-209ENST00000510024 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
SEMA6A-209ENST00000510024 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
SEMA6A-209ENST00000510024 TBC1D2Q9BYX2 928 aa10.07□□□□□ -0.8
SEMA6A-209ENST00000510024 BCAMP50895 628 aa10.06□□□□□ -0.8
SEMA6A-209ENST00000510024 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
SEMA6A-209ENST00000510024 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
SEMA6A-209ENST00000510024 TSR3Q9UJK0 312 aaKnown RBP10.05□□□□□ -0.8
SEMA6A-209ENST00000510024 KDM4AO75164 1064 aa10.04□□□□□ -0.8
SEMA6A-209ENST00000510024 CFHP08603 1231 aa10.04□□□□□ -0.8
SEMA6A-209ENST00000510024 USP46P62068 366 aa10.04□□□□□ -0.8
SEMA6A-209ENST00000510024 SKIV2LQ15477 1246 aaKnown RBP10.04□□□□□ -0.8
SEMA6A-209ENST00000510024 RNF40O75150 1001 aa10.03□□□□□ -0.8
SEMA6A-209ENST00000510024 GJA5P36382 358 aa10.03□□□□□ -0.8
SEMA6A-209ENST00000510024 NUTM1Q86Y26 1132 aa10.03□□□□□ -0.8
SEMA6A-209ENST00000510024 HPS5Q9UPZ3 1129 aa10.03□□□□□ -0.8
SEMA6A-209ENST00000510024 PPP4CP60510 307 aa10.02□□□□□ -0.81
SEMA6A-209ENST00000510024 ACTN4O43707 911 aaKnown RBP10.01□□□□□ -0.81
SEMA6A-209ENST00000510024 TUSC1Q2TAM9 212 aa10.01□□□□□ -0.81
SEMA6A-209ENST00000510024 KMT5BQ4FZB7 885 aa10.01□□□□□ -0.81
SEMA6A-209ENST00000510024 KCTD12Q96CX2 325 aaKnown RBP10.01□□□□□ -0.81
SEMA6A-209ENST00000510024 PRR14Q9BWN1 585 aa10.01□□□□□ -0.81
SEMA6A-209ENST00000510024 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
SEMA6A-209ENST00000510024 SPTLC1O15269 473 aa10□□□□□ -0.81
SEMA6A-209ENST00000510024 HOXA2O43364 376 aa10□□□□□ -0.81
SEMA6A-209ENST00000510024 MOXD2PA6NHM9 499 aa9.99□□□□□ -0.81
SEMA6A-209ENST00000510024 FUT2Q10981 343 aa9.99□□□□□ -0.81
SEMA6A-209ENST00000510024 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
SEMA6A-209ENST00000510024 SPNS2Q8IVW8 549 aa9.99□□□□□ -0.81
SEMA6A-209ENST00000510024 WBP1LQ9NX94 342 aa9.99□□□□□ -0.81
SEMA6A-209ENST00000510024 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
SEMA6A-209ENST00000510024 APLP1P51693 650 aa9.98□□□□□ -0.81
SEMA6A-209ENST00000510024 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
SEMA6A-209ENST00000510024 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
SEMA6A-209ENST00000510024 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.98□□□□□ -0.81
SEMA6A-209ENST00000510024 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
SEMA6A-209ENST00000510024 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
SEMA6A-209ENST00000510024 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
SEMA6A-209ENST00000510024 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
SEMA6A-209ENST00000510024 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
SEMA6A-209ENST00000510024 NDUFV2P19404 249 aa9.95□□□□□ -0.82
SEMA6A-209ENST00000510024 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
SEMA6A-209ENST00000510024 MORN1Q5T089 497 aa9.94□□□□□ -0.82
SEMA6A-209ENST00000510024 FDX1P10109 184 aa9.93□□□□□ -0.82
SEMA6A-209ENST00000510024 HLA-CQ95604 372 aa9.93□□□□□ -0.82
SEMA6A-209ENST00000510024 PCDHGC3Q9UN70 934 aa9.93□□□□□ -0.82
SEMA6A-209ENST00000510024 GTF3C3Q9Y5Q9 886 aa9.93□□□□□ -0.82
SEMA6A-209ENST00000510024 PRPF38BQ5VTL8 546 aaKnown RBP9.92□□□□□ -0.82
SEMA6A-209ENST00000510024 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
SEMA6A-209ENST00000510024 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
SEMA6A-209ENST00000510024 PCDHB3Q9Y5E6 796 aa9.91□□□□□ -0.82
SEMA6A-209ENST00000510024 PCDHB15Q9Y5E8 787 aa9.91□□□□□ -0.82
SEMA6A-209ENST00000510024 LILRB3O75022 631 aa9.9□□□□□ -0.82
SEMA6A-209ENST00000510024 PTPN5P54829 565 aa9.9□□□□□ -0.82
SEMA6A-209ENST00000510024 GUCA2AQ02747 115 aa9.9□□□□□ -0.82
SEMA6A-209ENST00000510024 PUS10Q3MIT2 529 aaKnown RBP9.9□□□□□ -0.82
SEMA6A-209ENST00000510024 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
SEMA6A-209ENST00000510024 SALL2Q9Y467 1007 aaPredicted RBP9.89□□□□□ -0.83
SEMA6A-209ENST00000510024 QPCTQ16769 361 aa9.88□□□□□ -0.83
SEMA6A-209ENST00000510024 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
SEMA6A-209ENST00000510024 BLOC1S3Q6QNY0 202 aa9.87□□□□□ -0.83
SEMA6A-209ENST00000510024 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
SEMA6A-209ENST00000510024 HCSTQ9UBK5 93 aa9.87□□□□□ -0.83
SEMA6A-209ENST00000510024 NR1I2O75469 434 aa9.86□□□□□ -0.83
SEMA6A-209ENST00000510024 HRCP23327 699 aa9.86□□□□□ -0.83
SEMA6A-209ENST00000510024 MMRN1Q13201 1228 aa9.86□□□□□ -0.83
SEMA6A-209ENST00000510024 Q3C1V9 767 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms