RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ANKK1Q8NFD2 765 aa15.3■□□□□ 0.04
TRAPPC11-206ENST00000509857 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
TRAPPC11-206ENST00000509857 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
TRAPPC11-206ENST00000509857 TTLL12Q14166 644 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC11-206ENST00000509857 WNT2BQ93097 391 aa15.28■□□□□ 0.04
TRAPPC11-206ENST00000509857 REPIN1Q9BWE0 567 aaKnown RBP15.28■□□□□ 0.04
TRAPPC11-206ENST00000509857 LRCH3Q96II8 777 aa15.27■□□□□ 0.04
TRAPPC11-206ENST00000509857 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
TRAPPC11-206ENST00000509857 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC11-206ENST00000509857 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
TRAPPC11-206ENST00000509857 GIGYF2Q6Y7W6 1299 aaKnown RBP15.23■□□□□ 0.03
TRAPPC11-206ENST00000509857 THSD4Q6ZMP0 1018 aa15.23■□□□□ 0.03
TRAPPC11-206ENST00000509857 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC11-206ENST00000509857 BRPF1P55201 1214 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC11-206ENST00000509857 KCTD12Q96CX2 325 aaKnown RBP15.22■□□□□ 0.03
TRAPPC11-206ENST00000509857 BCAMP50895 628 aa15.21■□□□□ 0.03
TRAPPC11-206ENST00000509857 SULF1Q8IWU6 871 aa15.21■□□□□ 0.03
TRAPPC11-206ENST00000509857 SLC4A3P48751 1232 aa15.2■□□□□ 0.02
TRAPPC11-206ENST00000509857 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-206ENST00000509857 KDM4CQ9H3R0 1056 aa15.18■□□□□ 0.02
TRAPPC11-206ENST00000509857 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-206ENST00000509857 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
TRAPPC11-206ENST00000509857 NECTIN2Q92692 538 aa15.17■□□□□ 0.02
TRAPPC11-206ENST00000509857 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
TRAPPC11-206ENST00000509857 SLC10A3P09131 477 aa15.16■□□□□ 0.02
TRAPPC11-206ENST00000509857 SSTR3P32745 418 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-206ENST00000509857 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
TRAPPC11-206ENST00000509857 TSR3Q9UJK0 312 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-206ENST00000509857 MS4A1P11836 297 aa15.15■□□□□ 0.02
TRAPPC11-206ENST00000509857 CD46P15529 392 aa15.15■□□□□ 0.02
TRAPPC11-206ENST00000509857 HPS5Q9UPZ3 1129 aa15.15■□□□□ 0.02
TRAPPC11-206ENST00000509857 RSPH4AQ5TD94 716 aa15.14■□□□□ 0.01
TRAPPC11-206ENST00000509857 RNF40O75150 1001 aa15.13■□□□□ 0.01
TRAPPC11-206ENST00000509857 PPP4CP60510 307 aa15.11■□□□□ 0.01
TRAPPC11-206ENST00000509857 RDH13Q8NBN7 331 aa15.1■□□□□ 0.01
TRAPPC11-206ENST00000509857 WBP1LQ9NX94 342 aa15.1■□□□□ 0.01
TRAPPC11-206ENST00000509857 NYAP1Q6ZVC0 841 aa15.08■□□□□ 0
TRAPPC11-206ENST00000509857 CFHP08603 1231 aa15.07■□□□□ 0
TRAPPC11-206ENST00000509857 GCGRP47871 477 aa15.07■□□□□ 0
TRAPPC11-206ENST00000509857 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
TRAPPC11-206ENST00000509857 PRR14Q9BWN1 585 aa15.05■□□□□ -0
TRAPPC11-206ENST00000509857 HCSTQ9UBK5 93 aa15.05■□□□□ -0
TRAPPC11-206ENST00000509857 PTPN5P54829 565 aa15.04■□□□□ -0
TRAPPC11-206ENST00000509857 KMT5BQ4FZB7 885 aa15.04■□□□□ -0
TRAPPC11-206ENST00000509857 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
TRAPPC11-206ENST00000509857 FAM117AQ9C073 453 aa15.03■□□□□ -0
TRAPPC11-206ENST00000509857 ACTN4O43707 911 aaKnown RBP15.02■□□□□ -0
TRAPPC11-206ENST00000509857 APLP1P51693 650 aa15.02■□□□□ -0
TRAPPC11-206ENST00000509857 KDM4AO75164 1064 aa14.99□□□□□ -0.01
TRAPPC11-206ENST00000509857 PLEKHG3A1L390 1219 aa14.98□□□□□ -0.01
TRAPPC11-206ENST00000509857 USP46P62068 366 aa14.97□□□□□ -0.01
TRAPPC11-206ENST00000509857 SPIRE2Q8WWL2 714 aa14.96□□□□□ -0.01
TRAPPC11-206ENST00000509857 FUT2Q10981 343 aa14.95□□□□□ -0.02
TRAPPC11-206ENST00000509857 DIXDC1Q155Q3 683 aa14.95□□□□□ -0.02
TRAPPC11-206ENST00000509857 NUTM1Q86Y26 1132 aa14.94□□□□□ -0.02
TRAPPC11-206ENST00000509857 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
TRAPPC11-206ENST00000509857 HOXA2O43364 376 aa14.92□□□□□ -0.02
TRAPPC11-206ENST00000509857 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
TRAPPC11-206ENST00000509857 PCDHB3Q9Y5E6 796 aa14.91□□□□□ -0.02
TRAPPC11-206ENST00000509857 IL27Q8NEV9 243 aa14.9□□□□□ -0.02
TRAPPC11-206ENST00000509857 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
TRAPPC11-206ENST00000509857 GRIPAP1Q4V328 841 aa14.89□□□□□ -0.03
TRAPPC11-206ENST00000509857 MORN1Q5T089 497 aa14.89□□□□□ -0.03
TRAPPC11-206ENST00000509857 MYSM1Q5VVJ2 828 aa14.89□□□□□ -0.03
TRAPPC11-206ENST00000509857 GJA5P36382 358 aa14.87□□□□□ -0.03
TRAPPC11-206ENST00000509857 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
TRAPPC11-206ENST00000509857 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
TRAPPC11-206ENST00000509857 MOXD2PA6NHM9 499 aa14.85□□□□□ -0.03
TRAPPC11-206ENST00000509857 BLOC1S3Q6QNY0 202 aa14.85□□□□□ -0.03
TRAPPC11-206ENST00000509857 SPTLC1O15269 473 aa14.84□□□□□ -0.03
TRAPPC11-206ENST00000509857 PUS10Q3MIT2 529 aaKnown RBP14.84□□□□□ -0.03
TRAPPC11-206ENST00000509857 TJAP1Q5JTD0 557 aa14.84□□□□□ -0.03
TRAPPC11-206ENST00000509857 MTRQ99707 1265 aa14.84□□□□□ -0.03
TRAPPC11-206ENST00000509857 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC11-206ENST00000509857 NR1I2O75469 434 aa14.82□□□□□ -0.04
TRAPPC11-206ENST00000509857 ITGBL1O95965 494 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC11-206ENST00000509857 SKIV2LQ15477 1246 aaKnown RBP14.82□□□□□ -0.04
TRAPPC11-206ENST00000509857 HLA-CQ95604 372 aa14.82□□□□□ -0.04
TRAPPC11-206ENST00000509857 IL21Q9HBE4 155 aa14.82□□□□□ -0.04
TRAPPC11-206ENST00000509857 NDUFV2P19404 249 aa14.81□□□□□ -0.04
TRAPPC11-206ENST00000509857 TUSC1Q2TAM9 212 aa14.81□□□□□ -0.04
TRAPPC11-206ENST00000509857 SLC27A5Q9Y2P5 690 aa14.81□□□□□ -0.04
TRAPPC11-206ENST00000509857 FDX1P10109 184 aa14.8□□□□□ -0.04
TRAPPC11-206ENST00000509857 COPS2P61201 443 aa14.8□□□□□ -0.04
TRAPPC11-206ENST00000509857 RIC3Q7Z5B4 369 aa14.8□□□□□ -0.04
TRAPPC11-206ENST00000509857 CLK2P49760 499 aaKnown RBP14.79□□□□□ -0.04
TRAPPC11-206ENST00000509857 GUCA2AQ02747 115 aa14.79□□□□□ -0.04
TRAPPC11-206ENST00000509857 SCUBE3Q8IX30 993 aa14.79□□□□□ -0.04
TRAPPC11-206ENST00000509857 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
TRAPPC11-206ENST00000509857 SALL2Q9Y467 1007 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC11-206ENST00000509857 TMEM132AQ24JP5 1023 aa14.78□□□□□ -0.04
TRAPPC11-206ENST00000509857 LIMD1Q9UGP4 676 aa14.78□□□□□ -0.04
TRAPPC11-206ENST00000509857 PCDHGC3Q9UN70 934 aa14.78□□□□□ -0.04
TRAPPC11-206ENST00000509857 ZPR1O75312 459 aa14.76□□□□□ -0.05
TRAPPC11-206ENST00000509857 Q3C1V9 767 aa14.76□□□□□ -0.05
TRAPPC11-206ENST00000509857 THAP11Q96EK4 314 aa14.76□□□□□ -0.05
TRAPPC11-206ENST00000509857 POLR3EQ9NVU0 708 aa14.75□□□□□ -0.05
TRAPPC11-206ENST00000509857 BRICD5Q6PL45 260 aa14.73□□□□□ -0.05
TRAPPC11-206ENST00000509857 ZNF516Q92618 1163 aa14.73□□□□□ -0.05
TRAPPC11-206ENST00000509857 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms