RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
MBD4-208ENST00000509828 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
MBD4-208ENST00000509828 ATF3P18847 181 aa16.05■□□□□ 0.16
MBD4-208ENST00000509828 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
MBD4-208ENST00000509828 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
MBD4-208ENST00000509828 LMTK2Q8IWU2 1503 aa16.04■□□□□ 0.16
MBD4-208ENST00000509828 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
MBD4-208ENST00000509828 TET3O43151 1660 aa16.03■□□□□ 0.16
MBD4-208ENST00000509828 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
MBD4-208ENST00000509828 ZNF772Q68DY9 489 aaPredicted RBP16.03■□□□□ 0.16
MBD4-208ENST00000509828 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
MBD4-208ENST00000509828 ADGRB3O60242 1522 aa16.03■□□□□ 0.16
MBD4-208ENST00000509828 NOS1P29475 1434 aa16.02■□□□□ 0.16
MBD4-208ENST00000509828 TBX22Q9Y458 520 aa16.02■□□□□ 0.16
MBD4-208ENST00000509828 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.15
MBD4-208ENST00000509828 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.15
MBD4-208ENST00000509828 PLEKHG1Q9ULL1 1385 aa16.01■□□□□ 0.15
MBD4-208ENST00000509828 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
MBD4-208ENST00000509828 SPATA31A6Q5VVP1 1343 aa16■□□□□ 0.15
MBD4-208ENST00000509828 PHLPP1O60346 1717 aa16■□□□□ 0.15
MBD4-208ENST00000509828 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
MBD4-208ENST00000509828 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
MBD4-208ENST00000509828 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
MBD4-208ENST00000509828 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
MBD4-208ENST00000509828 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
MBD4-208ENST00000509828 RXRBP28702 533 aa15.97■□□□□ 0.15
MBD4-208ENST00000509828 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
MBD4-208ENST00000509828 NWD1Q149M9 1564 aa15.96■□□□□ 0.15
MBD4-208ENST00000509828 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
MBD4-208ENST00000509828 UPF1Q92900 1129 aaKnown RBP eCLIP15.95■□□□□ 0.14
MBD4-208ENST00000509828 ZFYVE9O95405 1425 aa15.94■□□□□ 0.14
MBD4-208ENST00000509828 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
MBD4-208ENST00000509828 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
MBD4-208ENST00000509828 SETD1AO15047 1707 aaKnown RBP15.91■□□□□ 0.14
MBD4-208ENST00000509828 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
MBD4-208ENST00000509828 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
MBD4-208ENST00000509828 BRINP3Q76B58 766 aa15.9■□□□□ 0.14
MBD4-208ENST00000509828 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
MBD4-208ENST00000509828 ITGAEP38570 1179 aa15.89■□□□□ 0.13
MBD4-208ENST00000509828 LRP6O75581 1613 aa15.89■□□□□ 0.13
MBD4-208ENST00000509828 COL16A1Q07092 1604 aaPredicted RBP15.89■□□□□ 0.13
MBD4-208ENST00000509828 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
MBD4-208ENST00000509828 GCC2Q8IWJ2 1684 aa15.88■□□□□ 0.13
MBD4-208ENST00000509828 AFF2P51816 1311 aa15.88■□□□□ 0.13
MBD4-208ENST00000509828 TMEM131LA2VDJ0 1609 aa15.87■□□□□ 0.13
MBD4-208ENST00000509828 ADAMTS13Q76LX8 1427 aa15.87■□□□□ 0.13
MBD4-208ENST00000509828 NUP155O75694 1391 aa15.87■□□□□ 0.13
MBD4-208ENST00000509828 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
MBD4-208ENST00000509828 QTRT2Q9H974 415 aaKnown RBP15.85■□□□□ 0.13
MBD4-208ENST00000509828 MYO5BQ9ULV0 1848 aa15.84■□□□□ 0.13
MBD4-208ENST00000509828 TRPM2O94759 1503 aa15.84■□□□□ 0.13
MBD4-208ENST00000509828 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
MBD4-208ENST00000509828 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
MBD4-208ENST00000509828 DIP2AQ14689 1571 aa15.83■□□□□ 0.13
MBD4-208ENST00000509828 NGLY1Q96IV0 654 aa15.83■□□□□ 0.12
MBD4-208ENST00000509828 ADAMTS2O95450 1211 aa15.81■□□□□ 0.12
MBD4-208ENST00000509828 RBM6P78332 1123 aaKnown RBP15.81■□□□□ 0.12
MBD4-208ENST00000509828 SHPRHQ149N8 1683 aa15.8■□□□□ 0.12
MBD4-208ENST00000509828 PTPRUQ92729 1446 aa15.8■□□□□ 0.12
MBD4-208ENST00000509828 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
MBD4-208ENST00000509828 DCCP43146 1447 aa15.79■□□□□ 0.12
MBD4-208ENST00000509828 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
MBD4-208ENST00000509828 FOXD1Q16676 465 aa15.78■□□□□ 0.12
MBD4-208ENST00000509828 UNC13BO14795 1591 aa15.78■□□□□ 0.12
MBD4-208ENST00000509828 ASXL1Q8IXJ9 1541 aa15.78■□□□□ 0.12
MBD4-208ENST00000509828 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
MBD4-208ENST00000509828 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
MBD4-208ENST00000509828 E9PCH4 1651 aa15.77■□□□□ 0.12
MBD4-208ENST00000509828 MST1RQ04912 1400 aa15.76■□□□□ 0.11
MBD4-208ENST00000509828 METP08581 1390 aa15.75■□□□□ 0.11
MBD4-208ENST00000509828 USP21Q9UK80 565 aa15.74■□□□□ 0.11
MBD4-208ENST00000509828 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
MBD4-208ENST00000509828 IQGAP3Q86VI3 1631 aa15.73■□□□□ 0.11
MBD4-208ENST00000509828 ADGRL3Q9HAR2 1447 aa15.72■□□□□ 0.11
MBD4-208ENST00000509828 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
MBD4-208ENST00000509828 RGS12O14924 1447 aa15.71■□□□□ 0.11
MBD4-208ENST00000509828 TRPC5Q9UL62 973 aaPredicted RBP15.71■□□□□ 0.11
MBD4-208ENST00000509828 ATAD2Q6PL18 1390 aa15.71■□□□□ 0.11
MBD4-208ENST00000509828 VGFO15240 615 aaPredicted RBP15.7■□□□□ 0.1
MBD4-208ENST00000509828 ORAI2Q96SN7 254 aa15.7■□□□□ 0.1
MBD4-208ENST00000509828 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
MBD4-208ENST00000509828 SETBP1Q9Y6X0 1596 aa15.69■□□□□ 0.1
MBD4-208ENST00000509828 C1orf167Q5SNV9 1468 aa15.68■□□□□ 0.1
MBD4-208ENST00000509828 XRN1Q8IZH2 1706 aaKnown RBP15.67■□□□□ 0.1
MBD4-208ENST00000509828 NHSL1Q5SYE7 1610 aa15.66■□□□□ 0.1
MBD4-208ENST00000509828 ESCO1Q5FWF5 840 aa15.66■□□□□ 0.1
MBD4-208ENST00000509828 SOS2Q07890 1332 aaPredicted RBP15.65■□□□□ 0.1
MBD4-208ENST00000509828 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
MBD4-208ENST00000509828 CCDC125Q86Z20 511 aa15.62■□□□□ 0.09
MBD4-208ENST00000509828 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
MBD4-208ENST00000509828 SPHKAPQ2M3C7 1700 aa15.62■□□□□ 0.09
MBD4-208ENST00000509828 NPHP3Q7Z494 1330 aa15.62■□□□□ 0.09
MBD4-208ENST00000509828 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
MBD4-208ENST00000509828 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
MBD4-208ENST00000509828 XPCQ01831 940 aaPredicted RBP15.61■□□□□ 0.09
MBD4-208ENST00000509828 RPGRIP1LQ68CZ1 1315 aa15.61■□□□□ 0.09
MBD4-208ENST00000509828 FOXO3O43524 673 aa15.6■□□□□ 0.09
MBD4-208ENST00000509828 NEXMIFQ5QGS0 1516 aa15.59■□□□□ 0.09
MBD4-208ENST00000509828 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
MBD4-208ENST00000509828 HAP1P54257 671 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms