RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
CYSTM1-204ENST00000509789 NEURL4Q96JN8 1562 aa19.9■□□□□ 0.78
CYSTM1-204ENST00000509789 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
CYSTM1-204ENST00000509789 TMEM131LA2VDJ0 1609 aa19.88■□□□□ 0.77
CYSTM1-204ENST00000509789 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
CYSTM1-204ENST00000509789 HDGFP51858 240 aaKnown RBP19.88■□□□□ 0.77
CYSTM1-204ENST00000509789 MYO3AQ8NEV4 1616 aa19.87■□□□□ 0.77
CYSTM1-204ENST00000509789 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
CYSTM1-204ENST00000509789 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
CYSTM1-204ENST00000509789 CEP170BQ9Y4F5 1589 aaPredicted RBP19.84■□□□□ 0.77
CYSTM1-204ENST00000509789 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
CYSTM1-204ENST00000509789 VGFO15240 615 aaPredicted RBP19.84■□□□□ 0.77
CYSTM1-204ENST00000509789 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
CYSTM1-204ENST00000509789 HOXD11P31277 338 aaPredicted RBP19.83■□□□□ 0.77
CYSTM1-204ENST00000509789 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.76
CYSTM1-204ENST00000509789 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
CYSTM1-204ENST00000509789 EID1Q9Y6B2 187 aa19.82■□□□□ 0.76
CYSTM1-204ENST00000509789 RIMS2Q9UQ26 1411 aa19.82■□□□□ 0.76
CYSTM1-204ENST00000509789 MYO5BQ9ULV0 1848 aa19.81■□□□□ 0.76
CYSTM1-204ENST00000509789 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
CYSTM1-204ENST00000509789 ZNF142P52746 1687 aaPredicted RBP19.79■□□□□ 0.76
CYSTM1-204ENST00000509789 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
CYSTM1-204ENST00000509789 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
CYSTM1-204ENST00000509789 ZFYVE9O95405 1425 aa19.77■□□□□ 0.76
CYSTM1-204ENST00000509789 NEXMIFQ5QGS0 1516 aa19.77■□□□□ 0.76
CYSTM1-204ENST00000509789 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.76
CYSTM1-204ENST00000509789 MYOM2P54296 1465 aa19.76■□□□□ 0.75
CYSTM1-204ENST00000509789 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
CYSTM1-204ENST00000509789 SLIT1O75093 1534 aa19.76■□□□□ 0.75
CYSTM1-204ENST00000509789 PPLO60437 1756 aa19.75■□□□□ 0.75
CYSTM1-204ENST00000509789 LTKP29376 864 aa19.75■□□□□ 0.75
CYSTM1-204ENST00000509789 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
CYSTM1-204ENST00000509789 BCANQ96GW7 911 aa19.74■□□□□ 0.75
CYSTM1-204ENST00000509789 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
CYSTM1-204ENST00000509789 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
CYSTM1-204ENST00000509789 HSPA2P54652 639 aa19.71■□□□□ 0.75
CYSTM1-204ENST00000509789 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
CYSTM1-204ENST00000509789 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
CYSTM1-204ENST00000509789 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
CYSTM1-204ENST00000509789 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
CYSTM1-204ENST00000509789 PLEKHG1Q9ULL1 1385 aa19.69■□□□□ 0.74
CYSTM1-204ENST00000509789 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
CYSTM1-204ENST00000509789 CFAP70Q5T0N1 1121 aa19.68■□□□□ 0.74
CYSTM1-204ENST00000509789 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
CYSTM1-204ENST00000509789 NCKAP5LQ9HCH0 1330 aa19.68■□□□□ 0.74
CYSTM1-204ENST00000509789 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
CYSTM1-204ENST00000509789 NBPF1Q3BBV0 1214 aa19.64■□□□□ 0.73
CYSTM1-204ENST00000509789 ROCK2O75116 1388 aaKnown RBP19.64■□□□□ 0.73
CYSTM1-204ENST00000509789 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
CYSTM1-204ENST00000509789 SLC26A8Q96RN1 970 aa19.62■□□□□ 0.73
CYSTM1-204ENST00000509789 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
CYSTM1-204ENST00000509789 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
CYSTM1-204ENST00000509789 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
CYSTM1-204ENST00000509789 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
CYSTM1-204ENST00000509789 MED14O60244 1454 aa19.6■□□□□ 0.73
CYSTM1-204ENST00000509789 KIAA1210Q9ULL0 1709 aa19.59■□□□□ 0.73
CYSTM1-204ENST00000509789 TRPM1Q7Z4N2 1603 aa19.59■□□□□ 0.73
CYSTM1-204ENST00000509789 ALKQ9UM73 1620 aa19.59■□□□□ 0.73
CYSTM1-204ENST00000509789 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
CYSTM1-204ENST00000509789 ADAMTS13Q76LX8 1427 aa19.59■□□□□ 0.73
CYSTM1-204ENST00000509789 GPRASP1Q5JY77 1395 aa19.58■□□□□ 0.73
CYSTM1-204ENST00000509789 LAMC1P11047 1609 aa19.57■□□□□ 0.72
CYSTM1-204ENST00000509789 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
CYSTM1-204ENST00000509789 NRXN3Q9Y4C0 1643 aa19.55■□□□□ 0.72
CYSTM1-204ENST00000509789 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
CYSTM1-204ENST00000509789 METP08581 1390 aa19.55■□□□□ 0.72
CYSTM1-204ENST00000509789 DIP2AQ14689 1571 aa19.54■□□□□ 0.72
CYSTM1-204ENST00000509789 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
CYSTM1-204ENST00000509789 RNF216Q9NWF9 866 aaPredicted RBP19.54■□□□□ 0.72
CYSTM1-204ENST00000509789 STK26Q9P289 416 aa19.54■□□□□ 0.72
CYSTM1-204ENST00000509789 PIK3R4Q99570 1358 aa19.52■□□□□ 0.72
CYSTM1-204ENST00000509789 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
CYSTM1-204ENST00000509789 TRAK1Q9UPV9 953 aa19.51■□□□□ 0.71
CYSTM1-204ENST00000509789 LRPPRCP42704 1394 aaKnown RBP19.51■□□□□ 0.71
CYSTM1-204ENST00000509789 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
CYSTM1-204ENST00000509789 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
CYSTM1-204ENST00000509789 USP47Q96K76 1375 aa19.5■□□□□ 0.71
CYSTM1-204ENST00000509789 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
CYSTM1-204ENST00000509789 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
CYSTM1-204ENST00000509789 AMOTL2Q9Y2J4 779 aa19.49■□□□□ 0.71
CYSTM1-204ENST00000509789 EIF3AQ14152 1382 aaKnown RBP19.48■□□□□ 0.71
CYSTM1-204ENST00000509789 ASXL1Q8IXJ9 1541 aa19.48■□□□□ 0.71
CYSTM1-204ENST00000509789 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
CYSTM1-204ENST00000509789 KCNA6P17658 529 aa19.47■□□□□ 0.71
CYSTM1-204ENST00000509789 SIRT1Q96EB6 747 aa19.46■□□□□ 0.71
CYSTM1-204ENST00000509789 POGKQ9P215 609 aa19.46■□□□□ 0.71
CYSTM1-204ENST00000509789 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
CYSTM1-204ENST00000509789 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
CYSTM1-204ENST00000509789 PRAM1Q96QH2 718 aa19.43■□□□□ 0.7
CYSTM1-204ENST00000509789 CENPJQ9HC77 1338 aaPredicted RBP19.43■□□□□ 0.7
CYSTM1-204ENST00000509789 TECPR2O15040 1411 aa19.42■□□□□ 0.7
CYSTM1-204ENST00000509789 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
CYSTM1-204ENST00000509789 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
CYSTM1-204ENST00000509789 WAPLQ7Z5K2 1190 aa19.41■□□□□ 0.7
CYSTM1-204ENST00000509789 DLC1Q96QB1 1528 aa19.41■□□□□ 0.7
CYSTM1-204ENST00000509789 FAM135BQ49AJ0 1406 aa19.4■□□□□ 0.7
CYSTM1-204ENST00000509789 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.69
CYSTM1-204ENST00000509789 ROBO2Q9HCK4 1378 aa19.39■□□□□ 0.69
CYSTM1-204ENST00000509789 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
CYSTM1-204ENST00000509789 PTCH1Q13635 1447 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms