RNA–Protein interactions for RNA: ENST00000509558.1

ZFYVE16-204, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-204ENST00000509558 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
ZFYVE16-204ENST00000509558 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
ZFYVE16-204ENST00000509558 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
ZFYVE16-204ENST00000509558 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
ZFYVE16-204ENST00000509558 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
ZFYVE16-204ENST00000509558 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
ZFYVE16-204ENST00000509558 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
ZFYVE16-204ENST00000509558 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
ZFYVE16-204ENST00000509558 C3P01024 1663 aa12.4□□□□□ -0.42
ZFYVE16-204ENST00000509558 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
ZFYVE16-204ENST00000509558 RPGRIP1LQ68CZ1 1315 aa12.39□□□□□ -0.43
ZFYVE16-204ENST00000509558 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
ZFYVE16-204ENST00000509558 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
ZFYVE16-204ENST00000509558 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
ZFYVE16-204ENST00000509558 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
ZFYVE16-204ENST00000509558 KDM5AP29375 1690 aaKnown RBP12.38□□□□□ -0.43
ZFYVE16-204ENST00000509558 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
ZFYVE16-204ENST00000509558 DDX10Q13206 875 aaKnown RBP12.37□□□□□ -0.43
ZFYVE16-204ENST00000509558 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
ZFYVE16-204ENST00000509558 ADGRB1O14514 1584 aa12.37□□□□□ -0.43
ZFYVE16-204ENST00000509558 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
ZFYVE16-204ENST00000509558 TNRQ92752 1358 aa12.36□□□□□ -0.43
ZFYVE16-204ENST00000509558 MIER1Q8N108 512 aa12.36□□□□□ -0.43
ZFYVE16-204ENST00000509558 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
ZFYVE16-204ENST00000509558 UBR1Q8IWV7 1749 aa12.35□□□□□ -0.43
ZFYVE16-204ENST00000509558 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
ZFYVE16-204ENST00000509558 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
ZFYVE16-204ENST00000509558 ASXL1Q8IXJ9 1541 aa12.35□□□□□ -0.43
ZFYVE16-204ENST00000509558 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
ZFYVE16-204ENST00000509558 CFAP70Q5T0N1 1121 aa12.34□□□□□ -0.43
ZFYVE16-204ENST00000509558 RIMS1Q86UR5 1692 aaKnown RBP12.34□□□□□ -0.43
ZFYVE16-204ENST00000509558 POTEDQ86YR6 584 aa12.33□□□□□ -0.44
ZFYVE16-204ENST00000509558 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
ZFYVE16-204ENST00000509558 TESK2Q96S53 571 aa12.32□□□□□ -0.44
ZFYVE16-204ENST00000509558 NLRP1Q9C000 1473 aa12.32□□□□□ -0.44
ZFYVE16-204ENST00000509558 RIMS2Q9UQ26 1411 aa12.31□□□□□ -0.44
ZFYVE16-204ENST00000509558 C14orf93Q9H972 538 aaKnown RBP12.31□□□□□ -0.44
ZFYVE16-204ENST00000509558 NRXN3Q9Y4C0 1643 aa12.3□□□□□ -0.44
ZFYVE16-204ENST00000509558 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
ZFYVE16-204ENST00000509558 ARHGEF28Q8N1W1 1705 aaKnown RBP12.3□□□□□ -0.44
ZFYVE16-204ENST00000509558 DISP3Q9P2K9 1392 aa12.3□□□□□ -0.44
ZFYVE16-204ENST00000509558 CEBPAP49715 358 aaPredicted RBP12.29□□□□□ -0.44
ZFYVE16-204ENST00000509558 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
ZFYVE16-204ENST00000509558 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
ZFYVE16-204ENST00000509558 EIF3AQ14152 1382 aaKnown RBP12.29□□□□□ -0.44
ZFYVE16-204ENST00000509558 PTPRMP28827 1452 aa12.28□□□□□ -0.44
ZFYVE16-204ENST00000509558 QRICH2Q9H0J4 1663 aa12.26□□□□□ -0.45
ZFYVE16-204ENST00000509558 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
ZFYVE16-204ENST00000509558 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
ZFYVE16-204ENST00000509558 ARHGAP23Q9P227 1491 aa12.26□□□□□ -0.45
ZFYVE16-204ENST00000509558 MYOM1P52179 1685 aa12.26□□□□□ -0.45
ZFYVE16-204ENST00000509558 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
ZFYVE16-204ENST00000509558 SBNO2Q9Y2G9 1366 aa12.25□□□□□ -0.45
ZFYVE16-204ENST00000509558 SLIT1O75093 1534 aa12.25□□□□□ -0.45
ZFYVE16-204ENST00000509558 TMEM132EQ6IEE7 984 aa12.24□□□□□ -0.45
ZFYVE16-204ENST00000509558 CEP170BQ9Y4F5 1589 aaPredicted RBP12.24□□□□□ -0.45
ZFYVE16-204ENST00000509558 TMF1P82094 1093 aa12.22□□□□□ -0.45
ZFYVE16-204ENST00000509558 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.45
ZFYVE16-204ENST00000509558 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
ZFYVE16-204ENST00000509558 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.21□□□□□ -0.45
ZFYVE16-204ENST00000509558 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.45
ZFYVE16-204ENST00000509558 DLC1Q96QB1 1528 aa12.21□□□□□ -0.46
ZFYVE16-204ENST00000509558 CENPJQ9HC77 1338 aaPredicted RBP12.2□□□□□ -0.46
ZFYVE16-204ENST00000509558 ANP32CO43423 234 aa12.2□□□□□ -0.46
ZFYVE16-204ENST00000509558 TRAK1Q9UPV9 953 aa12.2□□□□□ -0.46
ZFYVE16-204ENST00000509558 TULP4Q9NRJ4 1543 aa12.2□□□□□ -0.46
ZFYVE16-204ENST00000509558 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
ZFYVE16-204ENST00000509558 PLEKHG1Q9ULL1 1385 aa12.19□□□□□ -0.46
ZFYVE16-204ENST00000509558 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
ZFYVE16-204ENST00000509558 MED14O60244 1454 aa12.18□□□□□ -0.46
ZFYVE16-204ENST00000509558 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
ZFYVE16-204ENST00000509558 CPS1P31327 1500 aa12.17□□□□□ -0.46
ZFYVE16-204ENST00000509558 CCER2I3L3R5 266 aa12.17□□□□□ -0.46
ZFYVE16-204ENST00000509558 LTKP29376 864 aa12.17□□□□□ -0.46
ZFYVE16-204ENST00000509558 METP08581 1390 aa12.17□□□□□ -0.46
ZFYVE16-204ENST00000509558 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
ZFYVE16-204ENST00000509558 TECPR2O15040 1411 aa12.16□□□□□ -0.46
ZFYVE16-204ENST00000509558 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
ZFYVE16-204ENST00000509558 HDGFP51858 240 aaKnown RBP12.15□□□□□ -0.46
ZFYVE16-204ENST00000509558 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
ZFYVE16-204ENST00000509558 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
ZFYVE16-204ENST00000509558 CDCA8Q53HL2 280 aa12.14□□□□□ -0.47
ZFYVE16-204ENST00000509558 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
ZFYVE16-204ENST00000509558 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
ZFYVE16-204ENST00000509558 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
ZFYVE16-204ENST00000509558 THEMISQ8N1K5 641 aaPredicted RBP12.13□□□□□ -0.47
ZFYVE16-204ENST00000509558 STK26Q9P289 416 aa12.13□□□□□ -0.47
ZFYVE16-204ENST00000509558 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
ZFYVE16-204ENST00000509558 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
ZFYVE16-204ENST00000509558 XRN1Q8IZH2 1706 aaKnown RBP12.11□□□□□ -0.47
ZFYVE16-204ENST00000509558 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
ZFYVE16-204ENST00000509558 PANK3Q9H999 370 aa12.11□□□□□ -0.47
ZFYVE16-204ENST00000509558 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
ZFYVE16-204ENST00000509558 EID1Q9Y6B2 187 aa12.1□□□□□ -0.47
ZFYVE16-204ENST00000509558 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
ZFYVE16-204ENST00000509558 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
ZFYVE16-204ENST00000509558 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
ZFYVE16-204ENST00000509558 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
ZFYVE16-204ENST00000509558 KTN1Q86UP2 1357 aaKnown RBP12.08□□□□□ -0.48
ZFYVE16-204ENST00000509558 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms