RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 BLOC1S3Q6QNY0 202 aa4.4□□□□□ -1.7
CAST-226ENST00000509529 SLF2Q8IX21 1173 aa4.4□□□□□ -1.7
CAST-226ENST00000509529 ANKLE1Q8NAG6 615 aa4.4□□□□□ -1.7
CAST-226ENST00000509529 NECTIN2Q92692 538 aa4.4□□□□□ -1.7
CAST-226ENST00000509529 PCDHB3Q9Y5E6 796 aa4.4□□□□□ -1.7
CAST-226ENST00000509529 WFS1O76024 890 aa4.4□□□□□ -1.71
CAST-226ENST00000509529 STK17AQ9UEE5 414 aa4.4□□□□□ -1.71
CAST-226ENST00000509529 S1PR4O95977 384 aa4.39□□□□□ -1.71
CAST-226ENST00000509529 RBM27Q9P2N5 1060 aaKnown RBP4.39□□□□□ -1.71
CAST-226ENST00000509529 DACH1Q9UI36 760 aa4.39□□□□□ -1.71
CAST-226ENST00000509529 NFX1Q12986 1120 aaKnown RBP4.38□□□□□ -1.71
CAST-226ENST00000509529 GRXCR2A6NFK2 248 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 PLA2G2CQ5R387 149 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 GMPR2Q9P2T1 348 aaKnown RBP4.37□□□□□ -1.71
CAST-226ENST00000509529 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 SPDYE16A6NNV3 312 aaPredicted RBP4.37□□□□□ -1.71
CAST-226ENST00000509529 WIPF1O43516 503 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 PADI6Q6TGC4 694 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 TTC13Q8NBP0 860 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CAST-226ENST00000509529 CRIPAKQ8N1N5 446 aa4.36□□□□□ -1.71
CAST-226ENST00000509529 PRR14Q9BWN1 585 aa4.36□□□□□ -1.71
CAST-226ENST00000509529 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
CAST-226ENST00000509529 PKD2L1Q9P0L9 805 aa4.35□□□□□ -1.71
CAST-226ENST00000509529 C11orf95C9JLR9 678 aaPredicted RBP4.35□□□□□ -1.71
CAST-226ENST00000509529 OSBPP22059 807 aa4.35□□□□□ -1.71
CAST-226ENST00000509529 INSM1Q01101 510 aaPredicted RBP4.35□□□□□ -1.71
CAST-226ENST00000509529 SLC4A3P48751 1232 aa4.35□□□□□ -1.71
CAST-226ENST00000509529 FOXC1Q12948 553 aa4.35□□□□□ -1.71
CAST-226ENST00000509529 EYA1Q99502 592 aa4.34□□□□□ -1.71
CAST-226ENST00000509529 NPDC1Q9NQX5 325 aaPredicted RBP4.34□□□□□ -1.71
CAST-226ENST00000509529 AVPP01185 164 aa4.33□□□□□ -1.72
CAST-226ENST00000509529 AXIN1O15169 862 aa4.33□□□□□ -1.72
CAST-226ENST00000509529 ADH1BP00325 375 aa4.33□□□□□ -1.72
CAST-226ENST00000509529 ACTN4O43707 911 aaKnown RBP4.32□□□□□ -1.72
CAST-226ENST00000509529 SLC6A16Q9GZN6 736 aa4.32□□□□□ -1.72
CAST-226ENST00000509529 TOR4AQ9NXH8 423 aa4.32□□□□□ -1.72
CAST-226ENST00000509529 LMOD2Q6P5Q4 547 aa4.31□□□□□ -1.72
CAST-226ENST00000509529 CFHP08603 1231 aa4.3□□□□□ -1.72
CAST-226ENST00000509529 CTC1Q2NKJ3 1217 aa4.3□□□□□ -1.72
CAST-226ENST00000509529 KMT5BQ4FZB7 885 aa4.3□□□□□ -1.72
CAST-226ENST00000509529 SNRPBP14678 240 aaKnown RBP4.29□□□□□ -1.72
CAST-226ENST00000509529 DNAJB2P25686 324 aa4.29□□□□□ -1.72
CAST-226ENST00000509529 SMCPP49901 116 aaPredicted RBP4.29□□□□□ -1.72
CAST-226ENST00000509529 ARIH1Q9Y4X5 557 aaPredicted RBP4.29□□□□□ -1.72
CAST-226ENST00000509529 TERTO14746 1132 aaKnown RBP4.29□□□□□ -1.72
CAST-226ENST00000509529 CYP4X1Q8N118 509 aa4.29□□□□□ -1.72
CAST-226ENST00000509529 TMEM134Q9H6X4 195 aa4.29□□□□□ -1.72
CAST-226ENST00000509529 DCAF8L2P0C7V8 631 aa4.28□□□□□ -1.72
CAST-226ENST00000509529 E2F4Q16254 413 aa4.28□□□□□ -1.72
CAST-226ENST00000509529 NR1I2O75469 434 aa4.28□□□□□ -1.72
CAST-226ENST00000509529 SLC10A3P09131 477 aa4.27□□□□□ -1.73
CAST-226ENST00000509529 SCUBE3Q8IX30 993 aa4.27□□□□□ -1.73
CAST-226ENST00000509529 ATP13A2Q9NQ11 1180 aa4.27□□□□□ -1.73
CAST-226ENST00000509529 RPIAP49247 311 aa4.26□□□□□ -1.73
CAST-226ENST00000509529 PUS10Q3MIT2 529 aaKnown RBP4.26□□□□□ -1.73
CAST-226ENST00000509529 SPSB2Q99619 263 aa4.26□□□□□ -1.73
CAST-226ENST00000509529 FCF1Q9Y324 198 aaKnown RBP4.26□□□□□ -1.73
CAST-226ENST00000509529 TRIM47Q96LD4 638 aa4.25□□□□□ -1.73
CAST-226ENST00000509529 RCCD1A6NED2 376 aa4.25□□□□□ -1.73
CAST-226ENST00000509529 TTC24A2A3L6 582 aaPredicted RBP4.25□□□□□ -1.73
CAST-226ENST00000509529 CD2BP2O95400 341 aaKnown RBP4.25□□□□□ -1.73
CAST-226ENST00000509529 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
CAST-226ENST00000509529 FAM161AQ3B820 660 aa4.25□□□□□ -1.73
CAST-226ENST00000509529 RBM46Q8TBY0 533 aaKnown RBP4.25□□□□□ -1.73
CAST-226ENST00000509529 ADGRG1Q9Y653 693 aa4.25□□□□□ -1.73
CAST-226ENST00000509529 FAM181BA6NEQ2 426 aa4.24□□□□□ -1.73
CAST-226ENST00000509529 SMPD1P17405 629 aa4.24□□□□□ -1.73
CAST-226ENST00000509529 PTGDRQ13258 359 aa4.23□□□□□ -1.73
CAST-226ENST00000509529 SENP2Q9HC62 589 aa4.23□□□□□ -1.73
CAST-226ENST00000509529 SUZ12Q15022 739 aaKnown RBP4.22□□□□□ -1.73
CAST-226ENST00000509529 ZSCAN1Q8NBB4 408 aa4.22□□□□□ -1.73
CAST-226ENST00000509529 GMPRP36959 345 aa4.22□□□□□ -1.73
CAST-226ENST00000509529 PRDM9Q9NQV7 894 aa4.22□□□□□ -1.73
CAST-226ENST00000509529 J3QL48 77 aa4.21□□□□□ -1.74
CAST-226ENST00000509529 RBAK-RBAKDNI3L0D1 243 aa4.21□□□□□ -1.74
CAST-226ENST00000509529 FAM160A2Q8N612 972 aaPredicted RBP4.21□□□□□ -1.74
CAST-226ENST00000509529 SNIP1Q8TAD8 396 aaKnown RBP4.2□□□□□ -1.74
CAST-226ENST00000509529 THAP11Q96EK4 314 aa4.2□□□□□ -1.74
CAST-226ENST00000509529 WNT7AO00755 349 aa4.2□□□□□ -1.74
CAST-226ENST00000509529 MLLT3P42568 568 aaPredicted RBP4.2□□□□□ -1.74
CAST-226ENST00000509529 SLC16A10Q8TF71 515 aa4.2□□□□□ -1.74
CAST-226ENST00000509529 HPS1Q92902 700 aa4.2□□□□□ -1.74
CAST-226ENST00000509529 KIFC2Q96AC6 838 aa4.2□□□□□ -1.74
CAST-226ENST00000509529 MRGPRX2Q96LB1 330 aa4.19□□□□□ -1.74
CAST-226ENST00000509529 WDR70Q9NW82 654 aa4.19□□□□□ -1.74
CAST-226ENST00000509529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.19□□□□□ -1.74
CAST-226ENST00000509529 MORN1Q5T089 497 aa4.19□□□□□ -1.74
CAST-226ENST00000509529 NXF1Q9UBU9 619 aaKnown RBP4.19□□□□□ -1.74
CAST-226ENST00000509529 ZBTB24O43167 697 aaPredicted RBP4.18□□□□□ -1.74
CAST-226ENST00000509529 VEGFBP49765 207 aa4.18□□□□□ -1.74
CAST-226ENST00000509529 FUT2Q10981 343 aa4.18□□□□□ -1.74
CAST-226ENST00000509529 TRIM32Q13049 653 aa4.18□□□□□ -1.74
CAST-226ENST00000509529 IRF7Q92985 503 aa4.18□□□□□ -1.74
CAST-226ENST00000509529 PXYLP1Q8TE99 480 aa4.17□□□□□ -1.74
CAST-226ENST00000509529 SLC27A5Q9Y2P5 690 aa4.17□□□□□ -1.74
CAST-226ENST00000509529 ERBB4Q15303 1308 aa4.17□□□□□ -1.74
CAST-226ENST00000509529 FMNL1O95466 1100 aaPredicted RBP4.17□□□□□ -1.74
CAST-226ENST00000509529 BMP1P13497 986 aa4.15□□□□□ -1.74
CAST-226ENST00000509529 H3BM21 787 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms