RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.44
CCSER1-208ENST00000509109 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
CCSER1-208ENST00000509109 ATP10BO94823 1461 aa12.32□□□□□ -0.44
CCSER1-208ENST00000509109 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
CCSER1-208ENST00000509109 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
CCSER1-208ENST00000509109 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
CCSER1-208ENST00000509109 COL17A1Q9UMD9 1497 aaPredicted RBP12.3□□□□□ -0.44
CCSER1-208ENST00000509109 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
CCSER1-208ENST00000509109 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
CCSER1-208ENST00000509109 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
CCSER1-208ENST00000509109 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
CCSER1-208ENST00000509109 DPYSL4O14531 572 aa12.29□□□□□ -0.44
CCSER1-208ENST00000509109 ADGRL1O94910 1474 aa12.28□□□□□ -0.44
CCSER1-208ENST00000509109 NUP153P49790 1475 aaKnown RBP12.28□□□□□ -0.44
CCSER1-208ENST00000509109 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCSER1-208ENST00000509109 PBX2P40425 430 aa12.27□□□□□ -0.45
CCSER1-208ENST00000509109 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
CCSER1-208ENST00000509109 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
CCSER1-208ENST00000509109 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
CCSER1-208ENST00000509109 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
CCSER1-208ENST00000509109 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
CCSER1-208ENST00000509109 PSEN2P49810 448 aa12.26□□□□□ -0.45
CCSER1-208ENST00000509109 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
CCSER1-208ENST00000509109 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
CCSER1-208ENST00000509109 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
CCSER1-208ENST00000509109 NEO1Q92859 1461 aa12.25□□□□□ -0.45
CCSER1-208ENST00000509109 FOSBP53539 338 aa12.24□□□□□ -0.45
CCSER1-208ENST00000509109 HECW1Q76N89 1606 aa12.23□□□□□ -0.45
CCSER1-208ENST00000509109 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
CCSER1-208ENST00000509109 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
CCSER1-208ENST00000509109 E2F4Q16254 413 aa12.22□□□□□ -0.45
CCSER1-208ENST00000509109 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
CCSER1-208ENST00000509109 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
CCSER1-208ENST00000509109 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
CCSER1-208ENST00000509109 TTC37Q6PGP7 1564 aa12.18□□□□□ -0.46
CCSER1-208ENST00000509109 PLCB2Q00722 1185 aa12.17□□□□□ -0.46
CCSER1-208ENST00000509109 ZDHHC16Q969W1 377 aa12.17□□□□□ -0.46
CCSER1-208ENST00000509109 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
CCSER1-208ENST00000509109 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
CCSER1-208ENST00000509109 PCDHGA10Q9Y5H3 936 aa12.17□□□□□ -0.46
CCSER1-208ENST00000509109 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
CCSER1-208ENST00000509109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCSER1-208ENST00000509109 FANCAO15360 1455 aa12.16□□□□□ -0.46
CCSER1-208ENST00000509109 ARHGAP35Q9NRY4 1499 aa12.16□□□□□ -0.46
CCSER1-208ENST00000509109 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
CCSER1-208ENST00000509109 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
CCSER1-208ENST00000509109 FRMPD1Q5SYB0 1578 aa12.16□□□□□ -0.46
CCSER1-208ENST00000509109 RICTORQ6R327 1708 aa12.15□□□□□ -0.46
CCSER1-208ENST00000509109 MYO5CQ9NQX4 1742 aa12.15□□□□□ -0.46
CCSER1-208ENST00000509109 ARHGEF40Q8TER5 1519 aa12.15□□□□□ -0.46
CCSER1-208ENST00000509109 KIF14Q15058 1648 aa12.15□□□□□ -0.47
CCSER1-208ENST00000509109 DDX12PQ92771 950 aa12.14□□□□□ -0.47
CCSER1-208ENST00000509109 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
CCSER1-208ENST00000509109 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
CCSER1-208ENST00000509109 DENND4BO75064 1496 aaPredicted RBP12.14□□□□□ -0.47
CCSER1-208ENST00000509109 PTPREP23469 700 aa12.13□□□□□ -0.47
CCSER1-208ENST00000509109 AKNAQ7Z591 1439 aa12.12□□□□□ -0.47
CCSER1-208ENST00000509109 ZMYM4Q5VZL5 1548 aa12.12□□□□□ -0.47
CCSER1-208ENST00000509109 PHF14O94880 888 aa12.12□□□□□ -0.47
CCSER1-208ENST00000509109 CLIP1P30622 1438 aa12.11□□□□□ -0.47
CCSER1-208ENST00000509109 HECW2Q9P2P5 1572 aa12.11□□□□□ -0.47
CCSER1-208ENST00000509109 PDIA6Q15084 440 aa12.11□□□□□ -0.47
CCSER1-208ENST00000509109 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
CCSER1-208ENST00000509109 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
CCSER1-208ENST00000509109 PTGER2P43116 358 aa12.1□□□□□ -0.47
CCSER1-208ENST00000509109 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
CCSER1-208ENST00000509109 BCORL1Q5H9F3 1711 aa12.1□□□□□ -0.47
CCSER1-208ENST00000509109 ADAMTSL3P82987 1691 aa12.1□□□□□ -0.47
CCSER1-208ENST00000509109 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
CCSER1-208ENST00000509109 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
CCSER1-208ENST00000509109 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
CCSER1-208ENST00000509109 ZFYVE16Q7Z3T8 1539 aa12.09□□□□□ -0.47
CCSER1-208ENST00000509109 LRRIQ1Q96JM4 1722 aa12.08□□□□□ -0.47
CCSER1-208ENST00000509109 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.47
CCSER1-208ENST00000509109 TK2O00142 265 aa12.08□□□□□ -0.48
CCSER1-208ENST00000509109 PLCH2O75038 1416 aa12.08□□□□□ -0.48
CCSER1-208ENST00000509109 TROQ12816 1431 aaPredicted RBP12.08□□□□□ -0.48
CCSER1-208ENST00000509109 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
CCSER1-208ENST00000509109 POGZQ7Z3K3 1410 aa12.07□□□□□ -0.48
CCSER1-208ENST00000509109 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
CCSER1-208ENST00000509109 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
CCSER1-208ENST00000509109 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
CCSER1-208ENST00000509109 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
CCSER1-208ENST00000509109 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
CCSER1-208ENST00000509109 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
CCSER1-208ENST00000509109 ARHGAP5Q13017 1502 aa12.06□□□□□ -0.48
CCSER1-208ENST00000509109 HRO43593 1189 aa12.05□□□□□ -0.48
CCSER1-208ENST00000509109 NBR1Q14596 966 aa12.05□□□□□ -0.48
CCSER1-208ENST00000509109 EPAS1Q99814 870 aa12.05□□□□□ -0.48
CCSER1-208ENST00000509109 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
CCSER1-208ENST00000509109 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
CCSER1-208ENST00000509109 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
CCSER1-208ENST00000509109 PTPRMP28827 1452 aa12.04□□□□□ -0.48
CCSER1-208ENST00000509109 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
CCSER1-208ENST00000509109 COL9A1P20849 921 aa12.04□□□□□ -0.48
CCSER1-208ENST00000509109 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
CCSER1-208ENST00000509109 ZBED2Q9BTP6 218 aa12.04□□□□□ -0.48
CCSER1-208ENST00000509109 SCAPERQ9BY12 1400 aa12.03□□□□□ -0.48
CCSER1-208ENST00000509109 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
CCSER1-208ENST00000509109 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms