RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 MROH2AA6NES4 1674 aa15.25■□□□□ 0.03
COPS4-206ENST00000509093 ZC3H13Q5T200 1668 aaKnown RBP15.25■□□□□ 0.03
COPS4-206ENST00000509093 SYNMO15061 1565 aa15.24■□□□□ 0.03
COPS4-206ENST00000509093 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
COPS4-206ENST00000509093 HNRNPUQ00839 825 aaKnown RBP eCLIP15.23■□□□□ 0.03
COPS4-206ENST00000509093 KIF1BO60333 1816 aa15.22■□□□□ 0.03
COPS4-206ENST00000509093 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 ADGRF5Q8IZF2 1346 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 CCDC7Q96M83 1385 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 ST20-MTHFSA0A0A6YYL1 179 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 IDI1Q13907 227 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 NOP58Q9Y2X3 529 aaKnown RBP15.21■□□□□ 0.03
COPS4-206ENST00000509093 ADGRB3O60242 1522 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
COPS4-206ENST00000509093 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
COPS4-206ENST00000509093 ARID4BQ4LE39 1312 aaPredicted RBP15.2■□□□□ 0.02
COPS4-206ENST00000509093 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
COPS4-206ENST00000509093 CLTCQ00610 1675 aaKnown RBP15.2■□□□□ 0.02
COPS4-206ENST00000509093 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
COPS4-206ENST00000509093 PIK3C2BO00750 1634 aa15.18■□□□□ 0.02
COPS4-206ENST00000509093 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
COPS4-206ENST00000509093 NUTM2DQ5VT03 806 aaPredicted RBP15.17■□□□□ 0.02
COPS4-206ENST00000509093 ERVK-7P63135 1459 aa15.16■□□□□ 0.02
COPS4-206ENST00000509093 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
COPS4-206ENST00000509093 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
COPS4-206ENST00000509093 MYOM2P54296 1465 aa15.16■□□□□ 0.02
COPS4-206ENST00000509093 IFT172Q9UG01 1749 aa15.16■□□□□ 0.02
COPS4-206ENST00000509093 POLR3GLQ9BT43 218 aa15.15■□□□□ 0.02
COPS4-206ENST00000509093 SLC52A1Q9NWF4 448 aa15.14■□□□□ 0.01
COPS4-206ENST00000509093 ZMYM3Q14202 1370 aa15.13■□□□□ 0.01
COPS4-206ENST00000509093 LAMC1P11047 1609 aa15.13■□□□□ 0.01
COPS4-206ENST00000509093 NRXN1Q9ULB1 1477 aa15.13■□□□□ 0.01
COPS4-206ENST00000509093 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
COPS4-206ENST00000509093 PPLO60437 1756 aa15.12■□□□□ 0.01
COPS4-206ENST00000509093 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
COPS4-206ENST00000509093 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
COPS4-206ENST00000509093 TESK2Q96S53 571 aa15.11■□□□□ 0.01
COPS4-206ENST00000509093 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
COPS4-206ENST00000509093 NBR1Q14596 966 aa15.1■□□□□ 0.01
COPS4-206ENST00000509093 POLR1AO95602 1720 aaPredicted RBP15.1■□□□□ 0.01
COPS4-206ENST00000509093 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
COPS4-206ENST00000509093 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
COPS4-206ENST00000509093 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
COPS4-206ENST00000509093 MYO5BQ9ULV0 1848 aa15.09■□□□□ 0.01
COPS4-206ENST00000509093 PIK3C2GO75747 1445 aa15.09■□□□□ 0.01
COPS4-206ENST00000509093 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
COPS4-206ENST00000509093 B4GALNT3Q6L9W6 998 aa15.08■□□□□ 0
COPS4-206ENST00000509093 IQGAP1P46940 1657 aa15.08■□□□□ 0
COPS4-206ENST00000509093 SCAF11Q99590 1463 aaKnown RBP15.07■□□□□ 0
COPS4-206ENST00000509093 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
COPS4-206ENST00000509093 CEBPAP49715 358 aaPredicted RBP15.07■□□□□ 0
COPS4-206ENST00000509093 KIAA1210Q9ULL0 1709 aa15.07■□□□□ 0
COPS4-206ENST00000509093 TMEM132EQ6IEE7 984 aa15.06■□□□□ 0
COPS4-206ENST00000509093 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
COPS4-206ENST00000509093 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
COPS4-206ENST00000509093 VGFO15240 615 aaPredicted RBP15.05■□□□□ 0
COPS4-206ENST00000509093 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ 0
COPS4-206ENST00000509093 ZBED9Q6R2W3 1325 aa15.05■□□□□ -0
COPS4-206ENST00000509093 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
COPS4-206ENST00000509093 A2ML1A8K2U0 1454 aa15.03■□□□□ -0
COPS4-206ENST00000509093 ANP32AP39687 249 aaKnown RBP15.03■□□□□ -0
COPS4-206ENST00000509093 TNRQ92752 1358 aa15.02■□□□□ -0
COPS4-206ENST00000509093 IPO9Q96P70 1041 aaKnown RBP15.02□□□□□ -0.01
COPS4-206ENST00000509093 ADGRB1O14514 1584 aa15.02□□□□□ -0.01
COPS4-206ENST00000509093 TRAK1Q9UPV9 953 aa15.01□□□□□ -0.01
COPS4-206ENST00000509093 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
COPS4-206ENST00000509093 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
COPS4-206ENST00000509093 ZFYVE9O95405 1425 aa15.01□□□□□ -0.01
COPS4-206ENST00000509093 TMF1P82094 1093 aa15□□□□□ -0.01
COPS4-206ENST00000509093 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
COPS4-206ENST00000509093 RIMS2Q9UQ26 1411 aa14.98□□□□□ -0.01
COPS4-206ENST00000509093 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
COPS4-206ENST00000509093 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
COPS4-206ENST00000509093 FER1L4A9Z1Z3 1794 aa14.97□□□□□ -0.01
COPS4-206ENST00000509093 ASXL1Q8IXJ9 1541 aa14.97□□□□□ -0.01
COPS4-206ENST00000509093 CCDC184Q52MB2 194 aa14.96□□□□□ -0.01
COPS4-206ENST00000509093 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
COPS4-206ENST00000509093 C3P01024 1663 aa14.96□□□□□ -0.01
COPS4-206ENST00000509093 STK26Q9P289 416 aa14.95□□□□□ -0.02
COPS4-206ENST00000509093 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
COPS4-206ENST00000509093 SMG6Q86US8 1419 aaKnown RBP14.94□□□□□ -0.02
COPS4-206ENST00000509093 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
COPS4-206ENST00000509093 ALKQ9UM73 1620 aa14.93□□□□□ -0.02
COPS4-206ENST00000509093 PANK3Q9H999 370 aa14.92□□□□□ -0.02
COPS4-206ENST00000509093 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
COPS4-206ENST00000509093 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
COPS4-206ENST00000509093 PTPRMP28827 1452 aa14.92□□□□□ -0.02
COPS4-206ENST00000509093 PER1O15534 1290 aaPredicted RBP14.91□□□□□ -0.02
COPS4-206ENST00000509093 MRS2Q9HD23 443 aa14.91□□□□□ -0.02
COPS4-206ENST00000509093 SAFB2Q14151 953 aaKnown RBP eCLIP14.91□□□□□ -0.02
COPS4-206ENST00000509093 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
COPS4-206ENST00000509093 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
COPS4-206ENST00000509093 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
COPS4-206ENST00000509093 NLRP1Q9C000 1473 aa14.9□□□□□ -0.02
COPS4-206ENST00000509093 RIMS1Q86UR5 1692 aaKnown RBP14.89□□□□□ -0.03
COPS4-206ENST00000509093 QRICH2Q9H0J4 1663 aa14.89□□□□□ -0.03
COPS4-206ENST00000509093 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
COPS4-206ENST00000509093 ARHGEF28Q8N1W1 1705 aaKnown RBP14.89□□□□□ -0.03
COPS4-206ENST00000509093 LTKP29376 864 aa14.89□□□□□ -0.03
COPS4-206ENST00000509093 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms