RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 TRIM66O15016 1216 aa12.07□□□□□ -0.48
COL6A4P2-204ENST00000509090 BCAMP50895 628 aa12.07□□□□□ -0.48
COL6A4P2-204ENST00000509090 NLRP7Q8WX94 980 aa12.07□□□□□ -0.48
COL6A4P2-204ENST00000509090 AMHR2Q16671 573 aa12.05□□□□□ -0.48
COL6A4P2-204ENST00000509090 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
COL6A4P2-204ENST00000509090 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
COL6A4P2-204ENST00000509090 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
COL6A4P2-204ENST00000509090 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
COL6A4P2-204ENST00000509090 SLF2Q8IX21 1173 aa12.02□□□□□ -0.49
COL6A4P2-204ENST00000509090 TSR3Q9UJK0 312 aaKnown RBP12.01□□□□□ -0.49
COL6A4P2-204ENST00000509090 HPS5Q9UPZ3 1129 aa12.01□□□□□ -0.49
COL6A4P2-204ENST00000509090 REPIN1Q9BWE0 567 aaKnown RBP12□□□□□ -0.49
COL6A4P2-204ENST00000509090 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
COL6A4P2-204ENST00000509090 CLCN1P35523 988 aa11.99□□□□□ -0.49
COL6A4P2-204ENST00000509090 PTPN5P54829 565 aa11.99□□□□□ -0.49
COL6A4P2-204ENST00000509090 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
COL6A4P2-204ENST00000509090 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
COL6A4P2-204ENST00000509090 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
COL6A4P2-204ENST00000509090 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
COL6A4P2-204ENST00000509090 PPP4CP60510 307 aa11.98□□□□□ -0.49
COL6A4P2-204ENST00000509090 PDE4DQ08499 809 aa11.98□□□□□ -0.49
COL6A4P2-204ENST00000509090 SLC10A3P09131 477 aa11.97□□□□□ -0.49
COL6A4P2-204ENST00000509090 RNF40O75150 1001 aa11.96□□□□□ -0.49
COL6A4P2-204ENST00000509090 SULF1Q8IWU6 871 aa11.95□□□□□ -0.5
COL6A4P2-204ENST00000509090 PARP9Q8IXQ6 854 aa11.95□□□□□ -0.5
COL6A4P2-204ENST00000509090 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
COL6A4P2-204ENST00000509090 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
COL6A4P2-204ENST00000509090 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
COL6A4P2-204ENST00000509090 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
COL6A4P2-204ENST00000509090 NYAP1Q6ZVC0 841 aa11.93□□□□□ -0.5
COL6A4P2-204ENST00000509090 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
COL6A4P2-204ENST00000509090 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
COL6A4P2-204ENST00000509090 CD46P15529 392 aa11.91□□□□□ -0.5
COL6A4P2-204ENST00000509090 SSTR3P32745 418 aaPredicted RBP11.9□□□□□ -0.5
COL6A4P2-204ENST00000509090 APLP1P51693 650 aa11.89□□□□□ -0.51
COL6A4P2-204ENST00000509090 RDH13Q8NBN7 331 aa11.89□□□□□ -0.51
COL6A4P2-204ENST00000509090 CFHP08603 1231 aa11.88□□□□□ -0.51
COL6A4P2-204ENST00000509090 GCGRP47871 477 aa11.87□□□□□ -0.51
COL6A4P2-204ENST00000509090 MS4A1P11836 297 aa11.86□□□□□ -0.51
COL6A4P2-204ENST00000509090 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
COL6A4P2-204ENST00000509090 PRR14Q9BWN1 585 aa11.86□□□□□ -0.51
COL6A4P2-204ENST00000509090 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
COL6A4P2-204ENST00000509090 GPBP1L1Q9HC44 474 aaPredicted RBP11.84□□□□□ -0.51
COL6A4P2-204ENST00000509090 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
COL6A4P2-204ENST00000509090 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P2-204ENST00000509090 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
COL6A4P2-204ENST00000509090 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
COL6A4P2-204ENST00000509090 KDM4AO75164 1064 aa11.78□□□□□ -0.52
COL6A4P2-204ENST00000509090 FUT2Q10981 343 aa11.78□□□□□ -0.52
COL6A4P2-204ENST00000509090 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
COL6A4P2-204ENST00000509090 PCDHB3Q9Y5E6 796 aa11.78□□□□□ -0.52
COL6A4P2-204ENST00000509090 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
COL6A4P2-204ENST00000509090 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
COL6A4P2-204ENST00000509090 MTRQ99707 1265 aa11.76□□□□□ -0.53
COL6A4P2-204ENST00000509090 USP46P62068 366 aa11.75□□□□□ -0.53
COL6A4P2-204ENST00000509090 BLOC1S3Q6QNY0 202 aa11.75□□□□□ -0.53
COL6A4P2-204ENST00000509090 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
COL6A4P2-204ENST00000509090 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-204ENST00000509090 MORN1Q5T089 497 aa11.74□□□□□ -0.53
COL6A4P2-204ENST00000509090 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
COL6A4P2-204ENST00000509090 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
COL6A4P2-204ENST00000509090 IL21Q9HBE4 155 aa11.73□□□□□ -0.53
COL6A4P2-204ENST00000509090 HOXA2O43364 376 aa11.72□□□□□ -0.53
COL6A4P2-204ENST00000509090 COPS2P61201 443 aa11.72□□□□□ -0.53
COL6A4P2-204ENST00000509090 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
COL6A4P2-204ENST00000509090 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
COL6A4P2-204ENST00000509090 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
COL6A4P2-204ENST00000509090 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
COL6A4P2-204ENST00000509090 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
COL6A4P2-204ENST00000509090 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
COL6A4P2-204ENST00000509090 NR1I2O75469 434 aa11.7□□□□□ -0.54
COL6A4P2-204ENST00000509090 KCNC4Q03721 635 aa11.7□□□□□ -0.54
COL6A4P2-204ENST00000509090 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
COL6A4P2-204ENST00000509090 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
COL6A4P2-204ENST00000509090 ZPR1O75312 459 aa11.69□□□□□ -0.54
COL6A4P2-204ENST00000509090 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
COL6A4P2-204ENST00000509090 SLC27A5Q9Y2P5 690 aa11.69□□□□□ -0.54
COL6A4P2-204ENST00000509090 HLA-CQ95604 372 aa11.68□□□□□ -0.54
COL6A4P2-204ENST00000509090 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
COL6A4P2-204ENST00000509090 NDUFV2P19404 249 aa11.65□□□□□ -0.54
COL6A4P2-204ENST00000509090 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
COL6A4P2-204ENST00000509090 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
COL6A4P2-204ENST00000509090 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
COL6A4P2-204ENST00000509090 GJA5P36382 358 aa11.64□□□□□ -0.55
COL6A4P2-204ENST00000509090 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
COL6A4P2-204ENST00000509090 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
COL6A4P2-204ENST00000509090 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
COL6A4P2-204ENST00000509090 SPTLC1O15269 473 aa11.63□□□□□ -0.55
COL6A4P2-204ENST00000509090 FDX1P10109 184 aa11.63□□□□□ -0.55
COL6A4P2-204ENST00000509090 RSBN1LQ6PCB5 846 aaPredicted RBP11.63□□□□□ -0.55
COL6A4P2-204ENST00000509090 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
COL6A4P2-204ENST00000509090 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
COL6A4P2-204ENST00000509090 BRICD5Q6PL45 260 aa11.62□□□□□ -0.55
COL6A4P2-204ENST00000509090 TLL1O43897 1013 aa11.61□□□□□ -0.55
COL6A4P2-204ENST00000509090 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
COL6A4P2-204ENST00000509090 FMNL1O95466 1100 aaPredicted RBP11.6□□□□□ -0.55
COL6A4P2-204ENST00000509090 Q3C1V9 767 aa11.6□□□□□ -0.55
COL6A4P2-204ENST00000509090 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
COL6A4P2-204ENST00000509090 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
COL6A4P2-204ENST00000509090 TUSC1Q2TAM9 212 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms