RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
COL6A4P2-204ENST00000509090 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
COL6A4P2-204ENST00000509090 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
COL6A4P2-204ENST00000509090 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
COL6A4P2-204ENST00000509090 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
COL6A4P2-204ENST00000509090 FOXD1Q16676 465 aa22.72■■□□□ 1.23
COL6A4P2-204ENST00000509090 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
COL6A4P2-204ENST00000509090 ADRA2BP18089 450 aa21.81■■□□□ 1.08
COL6A4P2-204ENST00000509090 PIAS4Q8N2W9 510 aaPredicted RBP21.37■■□□□ 1.01
COL6A4P2-204ENST00000509090 MSH5O43196 834 aa20.93■□□□□ 0.94
COL6A4P2-204ENST00000509090 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
COL6A4P2-204ENST00000509090 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
COL6A4P2-204ENST00000509090 MAPK8IP2Q13387 824 aaPredicted RBP19.81■□□□□ 0.76
COL6A4P2-204ENST00000509090 KCNA4P22459 653 aa19.64■□□□□ 0.73
COL6A4P2-204ENST00000509090 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
COL6A4P2-204ENST00000509090 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
COL6A4P2-204ENST00000509090 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
COL6A4P2-204ENST00000509090 NPM3O75607 178 aaKnown RBP19.31■□□□□ 0.68
COL6A4P2-204ENST00000509090 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
COL6A4P2-204ENST00000509090 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
COL6A4P2-204ENST00000509090 POTEDQ86YR6 584 aa19.1■□□□□ 0.65
COL6A4P2-204ENST00000509090 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
COL6A4P2-204ENST00000509090 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
COL6A4P2-204ENST00000509090 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
COL6A4P2-204ENST00000509090 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
COL6A4P2-204ENST00000509090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL6A4P2-204ENST00000509090 ZBTB22O15209 634 aa18.08■□□□□ 0.48
COL6A4P2-204ENST00000509090 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.48
COL6A4P2-204ENST00000509090 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
COL6A4P2-204ENST00000509090 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
COL6A4P2-204ENST00000509090 RNF39Q9H2S5 420 aa17.95■□□□□ 0.46
COL6A4P2-204ENST00000509090 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
COL6A4P2-204ENST00000509090 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
COL6A4P2-204ENST00000509090 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
COL6A4P2-204ENST00000509090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
COL6A4P2-204ENST00000509090 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
COL6A4P2-204ENST00000509090 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
COL6A4P2-204ENST00000509090 ATXN8OSP0DMR3 200 aa17.47■□□□□ 0.39
COL6A4P2-204ENST00000509090 APLP2Q06481 763 aa17.47■□□□□ 0.39
COL6A4P2-204ENST00000509090 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
COL6A4P2-204ENST00000509090 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
COL6A4P2-204ENST00000509090 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
COL6A4P2-204ENST00000509090 CAPN15O75808 1086 aa17.31■□□□□ 0.36
COL6A4P2-204ENST00000509090 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
COL6A4P2-204ENST00000509090 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
COL6A4P2-204ENST00000509090 DSG3P32926 999 aa17.08■□□□□ 0.32
COL6A4P2-204ENST00000509090 ABCB7O75027 752 aa16.98■□□□□ 0.31
COL6A4P2-204ENST00000509090 POLA2Q14181 598 aa16.97■□□□□ 0.31
COL6A4P2-204ENST00000509090 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
COL6A4P2-204ENST00000509090 MKRN4PQ13434 485 aaPredicted RBP16.63■□□□□ 0.25
COL6A4P2-204ENST00000509090 FBLN2P98095 1184 aa16.6■□□□□ 0.25
COL6A4P2-204ENST00000509090 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
COL6A4P2-204ENST00000509090 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
COL6A4P2-204ENST00000509090 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
COL6A4P2-204ENST00000509090 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
COL6A4P2-204ENST00000509090 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
COL6A4P2-204ENST00000509090 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
COL6A4P2-204ENST00000509090 FKBP8Q14318 412 aa16.2■□□□□ 0.18
COL6A4P2-204ENST00000509090 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
COL6A4P2-204ENST00000509090 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
COL6A4P2-204ENST00000509090 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
COL6A4P2-204ENST00000509090 PROM2Q8N271 834 aa16■□□□□ 0.15
COL6A4P2-204ENST00000509090 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL6A4P2-204ENST00000509090 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
COL6A4P2-204ENST00000509090 SPDYE1Q8NFV5 336 aaPredicted RBP15.76■□□□□ 0.11
COL6A4P2-204ENST00000509090 PITPNM1O00562 1244 aa15.71■□□□□ 0.11
COL6A4P2-204ENST00000509090 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
COL6A4P2-204ENST00000509090 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
COL6A4P2-204ENST00000509090 FBXO3Q9UK99 471 aa15.64■□□□□ 0.09
COL6A4P2-204ENST00000509090 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
COL6A4P2-204ENST00000509090 PRR29P0C7W0 189 aa15.54■□□□□ 0.08
COL6A4P2-204ENST00000509090 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL6A4P2-204ENST00000509090 VASPP50552 380 aaPredicted RBP15.42■□□□□ 0.06
COL6A4P2-204ENST00000509090 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
COL6A4P2-204ENST00000509090 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
COL6A4P2-204ENST00000509090 MIER1Q8N108 512 aa15.36■□□□□ 0.05
COL6A4P2-204ENST00000509090 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
COL6A4P2-204ENST00000509090 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
COL6A4P2-204ENST00000509090 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
COL6A4P2-204ENST00000509090 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
COL6A4P2-204ENST00000509090 IFNLR1Q8IU57 520 aaPredicted RBP15.25■□□□□ 0.03
COL6A4P2-204ENST00000509090 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
COL6A4P2-204ENST00000509090 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
COL6A4P2-204ENST00000509090 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
COL6A4P2-204ENST00000509090 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
COL6A4P2-204ENST00000509090 POTEHQ6S545 545 aa15.11■□□□□ 0.01
COL6A4P2-204ENST00000509090 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL6A4P2-204ENST00000509090 SPOCK2Q92563 424 aa15.04■□□□□ -0
COL6A4P2-204ENST00000509090 NUBP1P53384 320 aa15.02■□□□□ -0
COL6A4P2-204ENST00000509090 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
COL6A4P2-204ENST00000509090 C19orf67A6NJJ6 358 aa14.92□□□□□ -0.02
COL6A4P2-204ENST00000509090 HAX1O00165 279 aa14.87□□□□□ -0.03
COL6A4P2-204ENST00000509090 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
COL6A4P2-204ENST00000509090 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
COL6A4P2-204ENST00000509090 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
COL6A4P2-204ENST00000509090 DCAF8Q5TAQ9 597 aa14.82□□□□□ -0.04
COL6A4P2-204ENST00000509090 GSE1Q14687 1217 aa14.81□□□□□ -0.04
COL6A4P2-204ENST00000509090 PAK3O75914 559 aaPredicted RBP14.8□□□□□ -0.04
COL6A4P2-204ENST00000509090 EVX2Q03828 476 aa14.8□□□□□ -0.04
COL6A4P2-204ENST00000509090 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms