RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
HMGCR-207ENST00000509085 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
HMGCR-207ENST00000509085 HDGFP51858 240 aaKnown RBP13.63□□□□□ -0.23
HMGCR-207ENST00000509085 RGS17Q9UGC6 210 aaPredicted RBP13.63□□□□□ -0.23
HMGCR-207ENST00000509085 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
HMGCR-207ENST00000509085 ANKRD50Q9ULJ7 1429 aa13.63□□□□□ -0.23
HMGCR-207ENST00000509085 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
HMGCR-207ENST00000509085 CHD2O14647 1828 aaKnown RBP13.62□□□□□ -0.23
HMGCR-207ENST00000509085 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
HMGCR-207ENST00000509085 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
HMGCR-207ENST00000509085 MYO5BQ9ULV0 1848 aa13.6□□□□□ -0.23
HMGCR-207ENST00000509085 UNC13BO14795 1591 aa13.6□□□□□ -0.23
HMGCR-207ENST00000509085 DIP2AQ14689 1571 aa13.6□□□□□ -0.23
HMGCR-207ENST00000509085 BCANQ96GW7 911 aa13.6□□□□□ -0.23
HMGCR-207ENST00000509085 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
HMGCR-207ENST00000509085 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
HMGCR-207ENST00000509085 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
HMGCR-207ENST00000509085 JCADQ9P266 1359 aa13.58□□□□□ -0.23
HMGCR-207ENST00000509085 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.58□□□□□ -0.24
HMGCR-207ENST00000509085 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
HMGCR-207ENST00000509085 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
HMGCR-207ENST00000509085 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
HMGCR-207ENST00000509085 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
HMGCR-207ENST00000509085 COL16A1Q07092 1604 aaPredicted RBP13.55□□□□□ -0.24
HMGCR-207ENST00000509085 POTEAQ6S8J7 498 aa13.55□□□□□ -0.24
HMGCR-207ENST00000509085 RBM33Q96EV2 1170 aaKnown RBP13.55□□□□□ -0.24
HMGCR-207ENST00000509085 IQGAP3Q86VI3 1631 aa13.54□□□□□ -0.24
HMGCR-207ENST00000509085 E9PCH4 1651 aa13.54□□□□□ -0.24
HMGCR-207ENST00000509085 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
HMGCR-207ENST00000509085 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
HMGCR-207ENST00000509085 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
HMGCR-207ENST00000509085 TRPM2O94759 1503 aa13.53□□□□□ -0.24
HMGCR-207ENST00000509085 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
HMGCR-207ENST00000509085 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
HMGCR-207ENST00000509085 SHPRHQ149N8 1683 aa13.52□□□□□ -0.25
HMGCR-207ENST00000509085 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.51□□□□□ -0.25
HMGCR-207ENST00000509085 DCCP43146 1447 aa13.5□□□□□ -0.25
HMGCR-207ENST00000509085 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
HMGCR-207ENST00000509085 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
HMGCR-207ENST00000509085 CHGAP10645 457 aaKnown RBP13.49□□□□□ -0.25
HMGCR-207ENST00000509085 ATF3P18847 181 aa13.49□□□□□ -0.25
HMGCR-207ENST00000509085 SETD1AO15047 1707 aaKnown RBP13.49□□□□□ -0.25
HMGCR-207ENST00000509085 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
HMGCR-207ENST00000509085 LRP6O75581 1613 aa13.46□□□□□ -0.25
HMGCR-207ENST00000509085 SETBP1Q9Y6X0 1596 aa13.46□□□□□ -0.25
HMGCR-207ENST00000509085 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
HMGCR-207ENST00000509085 XRN1Q8IZH2 1706 aaKnown RBP13.46□□□□□ -0.25
HMGCR-207ENST00000509085 NUP155O75694 1391 aa13.45□□□□□ -0.26
HMGCR-207ENST00000509085 SPHKAPQ2M3C7 1700 aa13.45□□□□□ -0.26
HMGCR-207ENST00000509085 AMOTL2Q9Y2J4 779 aa13.44□□□□□ -0.26
HMGCR-207ENST00000509085 NRXN3Q9Y4C0 1643 aa13.43□□□□□ -0.26
HMGCR-207ENST00000509085 PTPRUQ92729 1446 aa13.43□□□□□ -0.26
HMGCR-207ENST00000509085 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
HMGCR-207ENST00000509085 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
HMGCR-207ENST00000509085 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
HMGCR-207ENST00000509085 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
HMGCR-207ENST00000509085 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
HMGCR-207ENST00000509085 SETD5Q9C0A6 1442 aa13.41□□□□□ -0.26
HMGCR-207ENST00000509085 MST1RQ04912 1400 aa13.39□□□□□ -0.27
HMGCR-207ENST00000509085 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
HMGCR-207ENST00000509085 RXRBP28702 533 aa13.38□□□□□ -0.27
HMGCR-207ENST00000509085 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
HMGCR-207ENST00000509085 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGCR-207ENST00000509085 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
HMGCR-207ENST00000509085 NEXMIFQ5QGS0 1516 aa13.37□□□□□ -0.27
HMGCR-207ENST00000509085 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
HMGCR-207ENST00000509085 KIF1BO60333 1816 aa13.36□□□□□ -0.27
HMGCR-207ENST00000509085 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
HMGCR-207ENST00000509085 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
HMGCR-207ENST00000509085 METP08581 1390 aa13.35□□□□□ -0.27
HMGCR-207ENST00000509085 LAMC1P11047 1609 aa13.35□□□□□ -0.27
HMGCR-207ENST00000509085 PTCH1Q13635 1447 aa13.34□□□□□ -0.27
HMGCR-207ENST00000509085 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
HMGCR-207ENST00000509085 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
HMGCR-207ENST00000509085 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
HMGCR-207ENST00000509085 AFF2P51816 1311 aa13.34□□□□□ -0.27
HMGCR-207ENST00000509085 PRAG1Q86YV5 1406 aa13.33□□□□□ -0.28
HMGCR-207ENST00000509085 ITGAEP38570 1179 aa13.33□□□□□ -0.28
HMGCR-207ENST00000509085 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
HMGCR-207ENST00000509085 C1orf167Q5SNV9 1468 aa13.3□□□□□ -0.28
HMGCR-207ENST00000509085 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
HMGCR-207ENST00000509085 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
HMGCR-207ENST00000509085 RGS12O14924 1447 aa13.29□□□□□ -0.28
HMGCR-207ENST00000509085 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
HMGCR-207ENST00000509085 C8orf37Q96NL8 207 aa13.28□□□□□ -0.28
HMGCR-207ENST00000509085 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
HMGCR-207ENST00000509085 HFM1A2PYH4 1435 aa13.28□□□□□ -0.28
HMGCR-207ENST00000509085 NAIPQ13075 1403 aa13.27□□□□□ -0.29
HMGCR-207ENST00000509085 RRBP1Q9P2E9 1410 aaKnown RBP13.27□□□□□ -0.29
HMGCR-207ENST00000509085 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
HMGCR-207ENST00000509085 COL22A1Q8NFW1 1626 aaPredicted RBP13.26□□□□□ -0.29
HMGCR-207ENST00000509085 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
HMGCR-207ENST00000509085 PPLO60437 1756 aa13.25□□□□□ -0.29
HMGCR-207ENST00000509085 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
HMGCR-207ENST00000509085 ROBO2Q9HCK4 1378 aa13.25□□□□□ -0.29
HMGCR-207ENST00000509085 DDX17Q92841 729 aaKnown RBP13.25□□□□□ -0.29
HMGCR-207ENST00000509085 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
HMGCR-207ENST00000509085 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
HMGCR-207ENST00000509085 ADAMTS2O95450 1211 aa13.22□□□□□ -0.29
HMGCR-207ENST00000509085 NPHP3Q7Z494 1330 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms