RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
RFC1-211ENST00000509084 PTPRMP28827 1452 aa14.87□□□□□ -0.03
RFC1-211ENST00000509084 RPGRIP1LQ68CZ1 1315 aa14.87□□□□□ -0.03
RFC1-211ENST00000509084 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
RFC1-211ENST00000509084 MYO3AQ8NEV4 1616 aa14.86□□□□□ -0.03
RFC1-211ENST00000509084 RGL3Q3MIN7 710 aa14.86□□□□□ -0.03
RFC1-211ENST00000509084 MYOM2P54296 1465 aa14.86□□□□□ -0.03
RFC1-211ENST00000509084 UHRF1BP1Q6BDS2 1440 aa14.85□□□□□ -0.03
RFC1-211ENST00000509084 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
RFC1-211ENST00000509084 CEBPAP49715 358 aaPredicted RBP14.85□□□□□ -0.03
RFC1-211ENST00000509084 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
RFC1-211ENST00000509084 DCAF11Q8TEB1 546 aa14.84□□□□□ -0.03
RFC1-211ENST00000509084 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
RFC1-211ENST00000509084 PPLO60437 1756 aa14.83□□□□□ -0.03
RFC1-211ENST00000509084 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
RFC1-211ENST00000509084 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
RFC1-211ENST00000509084 ZNF142P52746 1687 aaPredicted RBP14.83□□□□□ -0.04
RFC1-211ENST00000509084 UBR1Q8IWV7 1749 aa14.83□□□□□ -0.04
RFC1-211ENST00000509084 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
RFC1-211ENST00000509084 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
RFC1-211ENST00000509084 SETD1BQ9UPS6 1966 aaKnown RBP14.81□□□□□ -0.04
RFC1-211ENST00000509084 PRAG1Q86YV5 1406 aa14.81□□□□□ -0.04
RFC1-211ENST00000509084 CEP170BQ9Y4F5 1589 aaPredicted RBP14.81□□□□□ -0.04
RFC1-211ENST00000509084 ZFYVE9O95405 1425 aa14.8□□□□□ -0.04
RFC1-211ENST00000509084 RALGAPBQ86X10 1494 aa14.8□□□□□ -0.04
RFC1-211ENST00000509084 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
RFC1-211ENST00000509084 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
RFC1-211ENST00000509084 KIAA1210Q9ULL0 1709 aa14.78□□□□□ -0.04
RFC1-211ENST00000509084 VGFO15240 615 aaPredicted RBP14.78□□□□□ -0.04
RFC1-211ENST00000509084 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
RFC1-211ENST00000509084 TRPM1Q7Z4N2 1603 aa14.77□□□□□ -0.04
RFC1-211ENST00000509084 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.77□□□□□ -0.05
RFC1-211ENST00000509084 LAMC1P11047 1609 aa14.77□□□□□ -0.05
RFC1-211ENST00000509084 SLIT1O75093 1534 aa14.76□□□□□ -0.05
RFC1-211ENST00000509084 RIMS2Q9UQ26 1411 aa14.76□□□□□ -0.05
RFC1-211ENST00000509084 NBPF8Q3BBV2 869 aa14.76□□□□□ -0.05
RFC1-211ENST00000509084 PIK3C2GO75747 1445 aa14.75□□□□□ -0.05
RFC1-211ENST00000509084 TMEM2Q9UHN6 1383 aa14.75□□□□□ -0.05
RFC1-211ENST00000509084 KDM4FA0A1W2PPD8 638 aa14.75□□□□□ -0.05
RFC1-211ENST00000509084 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
RFC1-211ENST00000509084 ARHGAP23Q9P227 1491 aa14.75□□□□□ -0.05
RFC1-211ENST00000509084 GPRASP1Q5JY77 1395 aa14.73□□□□□ -0.05
RFC1-211ENST00000509084 ADGRF5Q8IZF2 1346 aa14.72□□□□□ -0.05
RFC1-211ENST00000509084 SETBP1Q9Y6X0 1596 aa14.72□□□□□ -0.05
RFC1-211ENST00000509084 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
RFC1-211ENST00000509084 EID1Q9Y6B2 187 aa14.71□□□□□ -0.05
RFC1-211ENST00000509084 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
RFC1-211ENST00000509084 SCAF11Q99590 1463 aaKnown RBP14.69□□□□□ -0.06
RFC1-211ENST00000509084 PLEKHG1Q9ULL1 1385 aa14.68□□□□□ -0.06
RFC1-211ENST00000509084 CARD11Q9BXL7 1154 aa14.67□□□□□ -0.06
RFC1-211ENST00000509084 C14orf93Q9H972 538 aaKnown RBP14.67□□□□□ -0.06
RFC1-211ENST00000509084 DIP2AQ14689 1571 aa14.66□□□□□ -0.06
RFC1-211ENST00000509084 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
RFC1-211ENST00000509084 TXNDC2Q86VQ3 553 aa14.66□□□□□ -0.06
RFC1-211ENST00000509084 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
RFC1-211ENST00000509084 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
RFC1-211ENST00000509084 NUTM2DQ5VT03 806 aaPredicted RBP14.65□□□□□ -0.06
RFC1-211ENST00000509084 NRXN3Q9Y4C0 1643 aa14.65□□□□□ -0.06
RFC1-211ENST00000509084 IQGAP1P46940 1657 aa14.65□□□□□ -0.06
RFC1-211ENST00000509084 ADGRB1O14514 1584 aa14.64□□□□□ -0.07
RFC1-211ENST00000509084 POLR1AO95602 1720 aaPredicted RBP14.64□□□□□ -0.07
RFC1-211ENST00000509084 EIF3AQ14152 1382 aaKnown RBP14.64□□□□□ -0.07
RFC1-211ENST00000509084 USP47Q96K76 1375 aa14.64□□□□□ -0.07
RFC1-211ENST00000509084 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
RFC1-211ENST00000509084 ANKLE2Q86XL3 938 aa14.64□□□□□ -0.07
RFC1-211ENST00000509084 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
RFC1-211ENST00000509084 LTKP29376 864 aa14.62□□□□□ -0.07
RFC1-211ENST00000509084 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
RFC1-211ENST00000509084 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
RFC1-211ENST00000509084 LMTK3Q96Q04 1460 aa14.61□□□□□ -0.07
RFC1-211ENST00000509084 ASXL1Q8IXJ9 1541 aa14.61□□□□□ -0.07
RFC1-211ENST00000509084 HSPA5P11021 654 aaKnown RBP14.6□□□□□ -0.07
RFC1-211ENST00000509084 BCANQ96GW7 911 aa14.6□□□□□ -0.07
RFC1-211ENST00000509084 MED14O60244 1454 aa14.6□□□□□ -0.07
RFC1-211ENST00000509084 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
RFC1-211ENST00000509084 KNDC1Q76NI1 1749 aa14.58□□□□□ -0.08
RFC1-211ENST00000509084 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
RFC1-211ENST00000509084 YTHDC2Q9H6S0 1430 aaKnown RBP14.58□□□□□ -0.08
RFC1-211ENST00000509084 DLC1Q96QB1 1528 aa14.57□□□□□ -0.08
RFC1-211ENST00000509084 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
RFC1-211ENST00000509084 TBX22Q9Y458 520 aa14.57□□□□□ -0.08
RFC1-211ENST00000509084 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
RFC1-211ENST00000509084 PIK3R4Q99570 1358 aa14.57□□□□□ -0.08
RFC1-211ENST00000509084 ARHGEF28Q8N1W1 1705 aaKnown RBP14.56□□□□□ -0.08
RFC1-211ENST00000509084 SBNO2Q9Y2G9 1366 aa14.55□□□□□ -0.08
RFC1-211ENST00000509084 TECPR2O15040 1411 aa14.55□□□□□ -0.08
RFC1-211ENST00000509084 TMEM132EQ6IEE7 984 aa14.54□□□□□ -0.08
RFC1-211ENST00000509084 ABCC11Q96J66 1382 aa14.54□□□□□ -0.08
RFC1-211ENST00000509084 CPS1P31327 1500 aa14.54□□□□□ -0.08
RFC1-211ENST00000509084 METP08581 1390 aa14.53□□□□□ -0.08
RFC1-211ENST00000509084 ST20-MTHFSA0A0A6YYL1 179 aa14.53□□□□□ -0.08
RFC1-211ENST00000509084 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.08
RFC1-211ENST00000509084 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.09
RFC1-211ENST00000509084 FAM135BQ49AJ0 1406 aa14.51□□□□□ -0.09
RFC1-211ENST00000509084 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
RFC1-211ENST00000509084 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
RFC1-211ENST00000509084 QRICH2Q9H0J4 1663 aa14.51□□□□□ -0.09
RFC1-211ENST00000509084 PTCH1Q13635 1447 aa14.5□□□□□ -0.09
RFC1-211ENST00000509084 XRN1Q8IZH2 1706 aaKnown RBP14.5□□□□□ -0.09
RFC1-211ENST00000509084 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms