RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
PTPN20-220ENST00000508715 RIMS2Q9UQ26 1411 aa15.17■□□□□ 0.02
PTPN20-220ENST00000508715 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
PTPN20-220ENST00000508715 MED14O60244 1454 aa15.16■□□□□ 0.02
PTPN20-220ENST00000508715 SCAF11Q99590 1463 aaKnown RBP15.16■□□□□ 0.02
PTPN20-220ENST00000508715 NRXN3Q9Y4C0 1643 aa15.15■□□□□ 0.02
PTPN20-220ENST00000508715 NUTM2DQ5VT03 806 aaPredicted RBP15.15■□□□□ 0.02
PTPN20-220ENST00000508715 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
PTPN20-220ENST00000508715 IQGAP1P46940 1657 aa15.15■□□□□ 0.02
PTPN20-220ENST00000508715 RGL3Q3MIN7 710 aa15.14■□□□□ 0.01
PTPN20-220ENST00000508715 ANKLE2Q86XL3 938 aa15.14■□□□□ 0.01
PTPN20-220ENST00000508715 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
PTPN20-220ENST00000508715 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
PTPN20-220ENST00000508715 NPHP4O75161 1426 aaPredicted RBP15.11■□□□□ 0.01
PTPN20-220ENST00000508715 ZNF326Q5BKZ1 582 aaKnown RBP15.11■□□□□ 0.01
PTPN20-220ENST00000508715 STRCP1A6NGW2 1772 aa15.1■□□□□ 0.01
PTPN20-220ENST00000508715 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
PTPN20-220ENST00000508715 PLEKHG1Q9ULL1 1385 aa15.1■□□□□ 0.01
PTPN20-220ENST00000508715 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
PTPN20-220ENST00000508715 ADGRF5Q8IZF2 1346 aa15.09■□□□□ 0.01
PTPN20-220ENST00000508715 NRXN1Q9ULB1 1477 aa15.08■□□□□ 0.01
PTPN20-220ENST00000508715 SETBP1Q9Y6X0 1596 aa15.08■□□□□ 0
PTPN20-220ENST00000508715 NEUROD1Q13562 356 aa15.08■□□□□ 0
PTPN20-220ENST00000508715 EID1Q9Y6B2 187 aa15.08■□□□□ 0
PTPN20-220ENST00000508715 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
PTPN20-220ENST00000508715 MYOM2P54296 1465 aa15.07■□□□□ 0
PTPN20-220ENST00000508715 L3MBTL2Q969R5 705 aa15.06■□□□□ 0
PTPN20-220ENST00000508715 CHD2O14647 1828 aaKnown RBP15.06■□□□□ 0
PTPN20-220ENST00000508715 ALKQ9UM73 1620 aa15.04■□□□□ -0
PTPN20-220ENST00000508715 PIK3C2GO75747 1445 aa15.04■□□□□ -0
PTPN20-220ENST00000508715 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
PTPN20-220ENST00000508715 SLC26A8Q96RN1 970 aa15.04■□□□□ -0
PTPN20-220ENST00000508715 ASXL1Q8IXJ9 1541 aa15.03■□□□□ -0
PTPN20-220ENST00000508715 VGFO15240 615 aaPredicted RBP15.03■□□□□ -0
PTPN20-220ENST00000508715 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
PTPN20-220ENST00000508715 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
PTPN20-220ENST00000508715 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
PTPN20-220ENST00000508715 DCAF11Q8TEB1 546 aa15.03■□□□□ -0
PTPN20-220ENST00000508715 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
PTPN20-220ENST00000508715 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
PTPN20-220ENST00000508715 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
PTPN20-220ENST00000508715 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
PTPN20-220ENST00000508715 DIP2AQ14689 1571 aa15.01□□□□□ -0.01
PTPN20-220ENST00000508715 METP08581 1390 aa15□□□□□ -0.01
PTPN20-220ENST00000508715 ZNF335Q9H4Z2 1342 aaPredicted RBP15□□□□□ -0.01
PTPN20-220ENST00000508715 TBX22Q9Y458 520 aa15□□□□□ -0.01
PTPN20-220ENST00000508715 XIRP1Q702N8 1843 aaKnown RBP14.99□□□□□ -0.01
PTPN20-220ENST00000508715 NWD1Q149M9 1564 aa14.99□□□□□ -0.01
PTPN20-220ENST00000508715 PRAG1Q86YV5 1406 aa14.99□□□□□ -0.01
PTPN20-220ENST00000508715 XRN1Q8IZH2 1706 aaKnown RBP14.98□□□□□ -0.01
PTPN20-220ENST00000508715 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
PTPN20-220ENST00000508715 KIAA1210Q9ULL0 1709 aa14.97□□□□□ -0.01
PTPN20-220ENST00000508715 CFAP70Q5T0N1 1121 aa14.97□□□□□ -0.01
PTPN20-220ENST00000508715 BCANQ96GW7 911 aa14.97□□□□□ -0.01
PTPN20-220ENST00000508715 C14orf93Q9H972 538 aaKnown RBP14.97□□□□□ -0.01
PTPN20-220ENST00000508715 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
PTPN20-220ENST00000508715 LAMC1P11047 1609 aa14.96□□□□□ -0.01
PTPN20-220ENST00000508715 TRPM1Q7Z4N2 1603 aa14.96□□□□□ -0.01
PTPN20-220ENST00000508715 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
PTPN20-220ENST00000508715 TONSLQ96HA7 1378 aa14.96□□□□□ -0.02
PTPN20-220ENST00000508715 KCNA6P17658 529 aa14.94□□□□□ -0.02
PTPN20-220ENST00000508715 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
PTPN20-220ENST00000508715 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
PTPN20-220ENST00000508715 NBPF1Q3BBV0 1214 aa14.93□□□□□ -0.02
PTPN20-220ENST00000508715 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
PTPN20-220ENST00000508715 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
PTPN20-220ENST00000508715 AMOTL2Q9Y2J4 779 aa14.91□□□□□ -0.02
PTPN20-220ENST00000508715 CPS1P31327 1500 aa14.9□□□□□ -0.02
PTPN20-220ENST00000508715 NKTRP30414 1462 aaKnown RBP14.89□□□□□ -0.03
PTPN20-220ENST00000508715 TIMELESSQ9UNS1 1208 aa14.89□□□□□ -0.03
PTPN20-220ENST00000508715 TECPR2O15040 1411 aa14.89□□□□□ -0.03
PTPN20-220ENST00000508715 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
PTPN20-220ENST00000508715 LRPPRCP42704 1394 aaKnown RBP14.88□□□□□ -0.03
PTPN20-220ENST00000508715 ROBO2Q9HCK4 1378 aa14.88□□□□□ -0.03
PTPN20-220ENST00000508715 RBM33Q96EV2 1170 aaKnown RBP14.88□□□□□ -0.03
PTPN20-220ENST00000508715 ARHGEF28Q8N1W1 1705 aaKnown RBP14.88□□□□□ -0.03
PTPN20-220ENST00000508715 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
PTPN20-220ENST00000508715 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.86□□□□□ -0.03
PTPN20-220ENST00000508715 RALGAPBQ86X10 1494 aa14.86□□□□□ -0.03
PTPN20-220ENST00000508715 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 PTCH1Q13635 1447 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 STK26Q9P289 416 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 NALCNQ8IZF0 1738 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 DLC1Q96QB1 1528 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
PTPN20-220ENST00000508715 PROSER2Q86WR7 435 aaPredicted RBP14.83□□□□□ -0.04
PTPN20-220ENST00000508715 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
PTPN20-220ENST00000508715 WAPLQ7Z5K2 1190 aa14.82□□□□□ -0.04
PTPN20-220ENST00000508715 TRAK1Q9UPV9 953 aa14.81□□□□□ -0.04
PTPN20-220ENST00000508715 FAM135BQ49AJ0 1406 aa14.81□□□□□ -0.04
PTPN20-220ENST00000508715 SIRT1Q96EB6 747 aa14.8□□□□□ -0.04
PTPN20-220ENST00000508715 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
PTPN20-220ENST00000508715 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
PTPN20-220ENST00000508715 ADGRL3Q9HAR2 1447 aa14.78□□□□□ -0.04
PTPN20-220ENST00000508715 NCOA3Q9Y6Q9 1424 aa14.78□□□□□ -0.04
PTPN20-220ENST00000508715 PRAM1Q96QH2 718 aa14.77□□□□□ -0.05
PTPN20-220ENST00000508715 QRICH2Q9H0J4 1663 aa14.77□□□□□ -0.05
PTPN20-220ENST00000508715 RGPD8O14715 1765 aaPredicted RBP14.76□□□□□ -0.05
PTPN20-220ENST00000508715 SAFB2Q14151 953 aaKnown RBP eCLIP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms