RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 POTECB2RU33 542 aa8.31□□□□□ -1.08
COL4A3BP-205ENST00000508692 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
COL4A3BP-205ENST00000508692 E2F4Q16254 413 aa8.31□□□□□ -1.08
COL4A3BP-205ENST00000508692 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
COL4A3BP-205ENST00000508692 SLC19A1P41440 591 aa8.3□□□□□ -1.08
COL4A3BP-205ENST00000508692 MYT1Q01538 1121 aa8.3□□□□□ -1.08
COL4A3BP-205ENST00000508692 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
COL4A3BP-205ENST00000508692 TLL1O43897 1013 aa8.29□□□□□ -1.08
COL4A3BP-205ENST00000508692 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
COL4A3BP-205ENST00000508692 BLOC1S3Q6QNY0 202 aa8.29□□□□□ -1.08
COL4A3BP-205ENST00000508692 NPDC1Q9NQX5 325 aaPredicted RBP8.29□□□□□ -1.08
COL4A3BP-205ENST00000508692 ARIH1Q9Y4X5 557 aaPredicted RBP8.28□□□□□ -1.08
COL4A3BP-205ENST00000508692 PCDHB3Q9Y5E6 796 aa8.28□□□□□ -1.08
COL4A3BP-205ENST00000508692 SPRYD7Q5W111 196 aa8.26□□□□□ -1.09
COL4A3BP-205ENST00000508692 EYA1Q99502 592 aa8.26□□□□□ -1.09
COL4A3BP-205ENST00000508692 PPEF1O14829 653 aaPredicted RBP8.25□□□□□ -1.09
COL4A3BP-205ENST00000508692 DGAT1O75907 488 aa8.25□□□□□ -1.09
COL4A3BP-205ENST00000508692 SLC4A3P48751 1232 aa8.24□□□□□ -1.09
COL4A3BP-205ENST00000508692 ZNF598Q86UK7 904 aaKnown RBP8.24□□□□□ -1.09
COL4A3BP-205ENST00000508692 KCNV2Q8TDN2 545 aa8.24□□□□□ -1.09
COL4A3BP-205ENST00000508692 PRR14Q9BWN1 585 aa8.24□□□□□ -1.09
COL4A3BP-205ENST00000508692 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 TNFRSF10AO00220 468 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 PRR20EP86478 221 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 PRR20CP86479 221 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 PRR20DP86480 221 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 PRR20BP86481 221 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 PRR20AP86496 221 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 LIAT1Q6ZQX7 453 aa8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 ARHGEF1Q92888 912 aaKnown RBP8.23□□□□□ -1.09
COL4A3BP-205ENST00000508692 S1PR4O95977 384 aa8.22□□□□□ -1.09
COL4A3BP-205ENST00000508692 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
COL4A3BP-205ENST00000508692 ANKLE1Q8NAG6 615 aa8.22□□□□□ -1.09
COL4A3BP-205ENST00000508692 TULP1O00294 542 aaPredicted RBP8.21□□□□□ -1.1
COL4A3BP-205ENST00000508692 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
COL4A3BP-205ENST00000508692 GDF9O60383 454 aa8.19□□□□□ -1.1
COL4A3BP-205ENST00000508692 DNAJB2P25686 324 aa8.17□□□□□ -1.1
COL4A3BP-205ENST00000508692 PLA2G2CQ5R387 149 aa8.17□□□□□ -1.1
COL4A3BP-205ENST00000508692 LCE2AQ5TA79 106 aaPredicted RBP8.17□□□□□ -1.1
COL4A3BP-205ENST00000508692 ACTN4O43707 911 aaKnown RBP8.16□□□□□ -1.1
COL4A3BP-205ENST00000508692 CFHP08603 1231 aa8.16□□□□□ -1.1
COL4A3BP-205ENST00000508692 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
COL4A3BP-205ENST00000508692 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
COL4A3BP-205ENST00000508692 AAASQ9NRG9 546 aa8.16□□□□□ -1.1
COL4A3BP-205ENST00000508692 ADH1BP00325 375 aa8.15□□□□□ -1.1
COL4A3BP-205ENST00000508692 KMT5BQ4FZB7 885 aa8.14□□□□□ -1.11
COL4A3BP-205ENST00000508692 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
COL4A3BP-205ENST00000508692 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
COL4A3BP-205ENST00000508692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
COL4A3BP-205ENST00000508692 ADGRG1Q9Y653 693 aa8.13□□□□□ -1.11
COL4A3BP-205ENST00000508692 RCCD1A6NED2 376 aa8.12□□□□□ -1.11
COL4A3BP-205ENST00000508692 RBM46Q8TBY0 533 aaKnown RBP8.12□□□□□ -1.11
COL4A3BP-205ENST00000508692 PKD2L1Q9P0L9 805 aa8.12□□□□□ -1.11
COL4A3BP-205ENST00000508692 SLC10A3P09131 477 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 FOXC1Q12948 553 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 PTGDRQ13258 359 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 SMYD5Q6GMV2 418 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 LMOD2Q6P5Q4 547 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 DACH1Q9UI36 760 aa8.11□□□□□ -1.11
COL4A3BP-205ENST00000508692 NR1I2O75469 434 aa8.1□□□□□ -1.11
COL4A3BP-205ENST00000508692 TESPA1A2RU30 521 aaPredicted RBP8.08□□□□□ -1.12
COL4A3BP-205ENST00000508692 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
COL4A3BP-205ENST00000508692 SCUBE3Q8IX30 993 aa8.07□□□□□ -1.12
COL4A3BP-205ENST00000508692 SEMA3EO15041 775 aa8.06□□□□□ -1.12
COL4A3BP-205ENST00000508692 CRIPAKQ8N1N5 446 aa8.06□□□□□ -1.12
COL4A3BP-205ENST00000508692 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
COL4A3BP-205ENST00000508692 WFS1O76024 890 aa8.05□□□□□ -1.12
COL4A3BP-205ENST00000508692 SPSB2Q99619 263 aa8.04□□□□□ -1.12
COL4A3BP-205ENST00000508692 TOR4AQ9NXH8 423 aa8.04□□□□□ -1.12
COL4A3BP-205ENST00000508692 NUTM2FA1L443 756 aa8.03□□□□□ -1.12
COL4A3BP-205ENST00000508692 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
COL4A3BP-205ENST00000508692 AVPP01185 164 aa8.03□□□□□ -1.12
COL4A3BP-205ENST00000508692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
COL4A3BP-205ENST00000508692 AXIN1O15169 862 aa8.02□□□□□ -1.13
COL4A3BP-205ENST00000508692 RPIAP49247 311 aa8.01□□□□□ -1.13
COL4A3BP-205ENST00000508692 NFX1Q12986 1120 aaKnown RBP8.01□□□□□ -1.13
COL4A3BP-205ENST00000508692 FCF1Q9Y324 198 aaKnown RBP8.01□□□□□ -1.13
COL4A3BP-205ENST00000508692 CYP4X1Q8N118 509 aa8□□□□□ -1.13
COL4A3BP-205ENST00000508692 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
COL4A3BP-205ENST00000508692 ZC3H15Q8WU90 426 aaKnown RBP7.99□□□□□ -1.13
COL4A3BP-205ENST00000508692 CTC1Q2NKJ3 1217 aa7.98□□□□□ -1.13
COL4A3BP-205ENST00000508692 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
COL4A3BP-205ENST00000508692 STK17AQ9UEE5 414 aa7.98□□□□□ -1.13
COL4A3BP-205ENST00000508692 WIPF1O43516 503 aa7.97□□□□□ -1.13
COL4A3BP-205ENST00000508692 CD2BP2O95400 341 aaKnown RBP7.97□□□□□ -1.13
COL4A3BP-205ENST00000508692 THAP11Q96EK4 314 aa7.97□□□□□ -1.13
COL4A3BP-205ENST00000508692 PRDM9Q9NQV7 894 aa7.97□□□□□ -1.13
COL4A3BP-205ENST00000508692 FCHSD2O94868 740 aa7.96□□□□□ -1.14
COL4A3BP-205ENST00000508692 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
COL4A3BP-205ENST00000508692 MORN1Q5T089 497 aa7.96□□□□□ -1.14
COL4A3BP-205ENST00000508692 FAM160A2Q8N612 972 aaPredicted RBP7.96□□□□□ -1.14
COL4A3BP-205ENST00000508692 TTC24A2A3L6 582 aaPredicted RBP7.94□□□□□ -1.14
COL4A3BP-205ENST00000508692 OATP04181 439 aa7.94□□□□□ -1.14
COL4A3BP-205ENST00000508692 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
COL4A3BP-205ENST00000508692 FUT2Q10981 343 aa7.94□□□□□ -1.14
COL4A3BP-205ENST00000508692 RSPH4AQ5TD94 716 aa7.94□□□□□ -1.14
COL4A3BP-205ENST00000508692 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
COL4A3BP-205ENST00000508692 INSM1Q01101 510 aaPredicted RBP7.93□□□□□ -1.14
COL4A3BP-205ENST00000508692 RDH13Q8NBN7 331 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms