RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 THEMISQ8N1K5 641 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-208ENST00000508459 DCAF11Q8TEB1 546 aa20.53■□□□□ 0.88
HMGCLL1-208ENST00000508459 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
HMGCLL1-208ENST00000508459 UGGT1Q9NYU2 1555 aa20.52■□□□□ 0.88
HMGCLL1-208ENST00000508459 MYO3AQ8NEV4 1616 aa20.5■□□□□ 0.87
HMGCLL1-208ENST00000508459 ZNF142P52746 1687 aaPredicted RBP20.49■□□□□ 0.87
HMGCLL1-208ENST00000508459 IFT172Q9UG01 1749 aa20.48■□□□□ 0.87
HMGCLL1-208ENST00000508459 EID1Q9Y6B2 187 aa20.48■□□□□ 0.87
HMGCLL1-208ENST00000508459 PPLO60437 1756 aa20.48■□□□□ 0.87
HMGCLL1-208ENST00000508459 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
HMGCLL1-208ENST00000508459 CEBPAP49715 358 aaPredicted RBP20.47■□□□□ 0.87
HMGCLL1-208ENST00000508459 KIAA1210Q9ULL0 1709 aa20.47■□□□□ 0.87
HMGCLL1-208ENST00000508459 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
HMGCLL1-208ENST00000508459 LAMC1P11047 1609 aa20.45■□□□□ 0.87
HMGCLL1-208ENST00000508459 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
HMGCLL1-208ENST00000508459 NEXMIFQ5QGS0 1516 aa20.43■□□□□ 0.86
HMGCLL1-208ENST00000508459 TMEM2Q9UHN6 1383 aa20.43■□□□□ 0.86
HMGCLL1-208ENST00000508459 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
HMGCLL1-208ENST00000508459 NRXN1Q9ULB1 1477 aa20.43■□□□□ 0.86
HMGCLL1-208ENST00000508459 SLIT1O75093 1534 aa20.43■□□□□ 0.86
HMGCLL1-208ENST00000508459 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
HMGCLL1-208ENST00000508459 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
HMGCLL1-208ENST00000508459 RIMS2Q9UQ26 1411 aa20.41■□□□□ 0.86
HMGCLL1-208ENST00000508459 MYO5BQ9ULV0 1848 aa20.41■□□□□ 0.86
HMGCLL1-208ENST00000508459 ARHGAP23Q9P227 1491 aa20.38■□□□□ 0.85
HMGCLL1-208ENST00000508459 PIK3C2GO75747 1445 aa20.37■□□□□ 0.85
HMGCLL1-208ENST00000508459 ROCK2O75116 1388 aaKnown RBP20.37■□□□□ 0.85
HMGCLL1-208ENST00000508459 TRPM1Q7Z4N2 1603 aa20.36■□□□□ 0.85
HMGCLL1-208ENST00000508459 KDM4FA0A1W2PPD8 638 aa20.36■□□□□ 0.85
HMGCLL1-208ENST00000508459 SETBP1Q9Y6X0 1596 aa20.36■□□□□ 0.85
HMGCLL1-208ENST00000508459 EIF3AQ14152 1382 aaKnown RBP20.35■□□□□ 0.85
HMGCLL1-208ENST00000508459 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
HMGCLL1-208ENST00000508459 ANKLE2Q86XL3 938 aa20.35■□□□□ 0.85
HMGCLL1-208ENST00000508459 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
HMGCLL1-208ENST00000508459 SCAF11Q99590 1463 aaKnown RBP20.33■□□□□ 0.85
HMGCLL1-208ENST00000508459 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
HMGCLL1-208ENST00000508459 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
HMGCLL1-208ENST00000508459 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
HMGCLL1-208ENST00000508459 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
HMGCLL1-208ENST00000508459 DIP2AQ14689 1571 aa20.32■□□□□ 0.84
HMGCLL1-208ENST00000508459 NBPF8Q3BBV2 869 aa20.3■□□□□ 0.84
HMGCLL1-208ENST00000508459 ADGRF5Q8IZF2 1346 aa20.29■□□□□ 0.84
HMGCLL1-208ENST00000508459 BCANQ96GW7 911 aa20.26■□□□□ 0.83
HMGCLL1-208ENST00000508459 POLR1AO95602 1720 aaPredicted RBP20.25■□□□□ 0.83
HMGCLL1-208ENST00000508459 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
HMGCLL1-208ENST00000508459 MED14O60244 1454 aa20.24■□□□□ 0.83
HMGCLL1-208ENST00000508459 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
HMGCLL1-208ENST00000508459 USP47Q96K76 1375 aa20.23■□□□□ 0.83
HMGCLL1-208ENST00000508459 TBX22Q9Y458 520 aa20.23■□□□□ 0.83
HMGCLL1-208ENST00000508459 CFAP70Q5T0N1 1121 aa20.21■□□□□ 0.83
HMGCLL1-208ENST00000508459 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
HMGCLL1-208ENST00000508459 CDCA8Q53HL2 280 aa20.19■□□□□ 0.82
HMGCLL1-208ENST00000508459 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
HMGCLL1-208ENST00000508459 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
HMGCLL1-208ENST00000508459 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
HMGCLL1-208ENST00000508459 LTKP29376 864 aa20.18■□□□□ 0.82
HMGCLL1-208ENST00000508459 SIRT1Q96EB6 747 aa20.18■□□□□ 0.82
HMGCLL1-208ENST00000508459 NPHP4O75161 1426 aaPredicted RBP20.18■□□□□ 0.82
HMGCLL1-208ENST00000508459 LMTK3Q96Q04 1460 aa20.18■□□□□ 0.82
HMGCLL1-208ENST00000508459 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
HMGCLL1-208ENST00000508459 NBPF1Q3BBV0 1214 aa20.16■□□□□ 0.82
HMGCLL1-208ENST00000508459 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
HMGCLL1-208ENST00000508459 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
HMGCLL1-208ENST00000508459 SBNO2Q9Y2G9 1366 aa20.16■□□□□ 0.82
HMGCLL1-208ENST00000508459 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
HMGCLL1-208ENST00000508459 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
HMGCLL1-208ENST00000508459 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
HMGCLL1-208ENST00000508459 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
HMGCLL1-208ENST00000508459 ADAMTS13Q76LX8 1427 aa20.13■□□□□ 0.81
HMGCLL1-208ENST00000508459 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
HMGCLL1-208ENST00000508459 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
HMGCLL1-208ENST00000508459 TECPR2O15040 1411 aa20.12■□□□□ 0.81
HMGCLL1-208ENST00000508459 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
HMGCLL1-208ENST00000508459 MAPK8IP2Q13387 824 aaPredicted RBP20.12■□□□□ 0.81
HMGCLL1-208ENST00000508459 CENPJQ9HC77 1338 aaPredicted RBP20.11■□□□□ 0.81
HMGCLL1-208ENST00000508459 TMF1P82094 1093 aa20.1■□□□□ 0.81
HMGCLL1-208ENST00000508459 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
HMGCLL1-208ENST00000508459 POGKQ9P215 609 aa20.08■□□□□ 0.81
HMGCLL1-208ENST00000508459 PTCH1Q13635 1447 aa20.08■□□□□ 0.8
HMGCLL1-208ENST00000508459 CPS1P31327 1500 aa20.07■□□□□ 0.8
HMGCLL1-208ENST00000508459 PUS7Q96PZ0 661 aaKnown RBP20.07■□□□□ 0.8
HMGCLL1-208ENST00000508459 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
HMGCLL1-208ENST00000508459 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
HMGCLL1-208ENST00000508459 ARHGEF28Q8N1W1 1705 aaKnown RBP20.06■□□□□ 0.8
HMGCLL1-208ENST00000508459 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
HMGCLL1-208ENST00000508459 SLC26A8Q96RN1 970 aa20.05■□□□□ 0.8
HMGCLL1-208ENST00000508459 METP08581 1390 aa20.05■□□□□ 0.8
HMGCLL1-208ENST00000508459 NCKAP5LQ9HCH0 1330 aa20.03■□□□□ 0.8
HMGCLL1-208ENST00000508459 EVC2Q86UK5 1308 aa20.02■□□□□ 0.8
HMGCLL1-208ENST00000508459 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.8
HMGCLL1-208ENST00000508459 STK26Q9P289 416 aa20.02■□□□□ 0.8
HMGCLL1-208ENST00000508459 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
HMGCLL1-208ENST00000508459 QRICH2Q9H0J4 1663 aa20.02■□□□□ 0.8
HMGCLL1-208ENST00000508459 KCNA6P17658 529 aa20.01■□□□□ 0.79
HMGCLL1-208ENST00000508459 AMOTL2Q9Y2J4 779 aa20.01■□□□□ 0.79
HMGCLL1-208ENST00000508459 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
HMGCLL1-208ENST00000508459 NCOA3Q9Y6Q9 1424 aa20■□□□□ 0.79
HMGCLL1-208ENST00000508459 NWD1Q149M9 1564 aa20■□□□□ 0.79
HMGCLL1-208ENST00000508459 HSPA2P54652 639 aa19.99■□□□□ 0.79
HMGCLL1-208ENST00000508459 PRAM1Q96QH2 718 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms