RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
DHFR-204ENST00000508282 TSR3Q9UJK0 312 aaKnown RBP12.28□□□□□ -0.44
DHFR-204ENST00000508282 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
DHFR-204ENST00000508282 KRI1Q8N9T8 703 aaKnown RBP12.27□□□□□ -0.45
DHFR-204ENST00000508282 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
DHFR-204ENST00000508282 RNF40O75150 1001 aa12.25□□□□□ -0.45
DHFR-204ENST00000508282 SLF2Q8IX21 1173 aa12.24□□□□□ -0.45
DHFR-204ENST00000508282 PPP4CP60510 307 aa12.23□□□□□ -0.45
DHFR-204ENST00000508282 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
DHFR-204ENST00000508282 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
DHFR-204ENST00000508282 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
DHFR-204ENST00000508282 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
DHFR-204ENST00000508282 SLC10A3P09131 477 aa12.17□□□□□ -0.46
DHFR-204ENST00000508282 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
DHFR-204ENST00000508282 APLP1P51693 650 aa12.15□□□□□ -0.46
DHFR-204ENST00000508282 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
DHFR-204ENST00000508282 AK7Q96M32 723 aa12.15□□□□□ -0.46
DHFR-204ENST00000508282 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
DHFR-204ENST00000508282 TRIM66O15016 1216 aa12.13□□□□□ -0.47
DHFR-204ENST00000508282 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
DHFR-204ENST00000508282 AMHR2Q16671 573 aa12.12□□□□□ -0.47
DHFR-204ENST00000508282 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
DHFR-204ENST00000508282 CLCN1P35523 988 aa12.11□□□□□ -0.47
DHFR-204ENST00000508282 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
DHFR-204ENST00000508282 CFHP08603 1231 aa12.1□□□□□ -0.47
DHFR-204ENST00000508282 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
DHFR-204ENST00000508282 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
DHFR-204ENST00000508282 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
DHFR-204ENST00000508282 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
DHFR-204ENST00000508282 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
DHFR-204ENST00000508282 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
DHFR-204ENST00000508282 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
DHFR-204ENST00000508282 CD46P15529 392 aa12.06□□□□□ -0.48
DHFR-204ENST00000508282 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
DHFR-204ENST00000508282 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
DHFR-204ENST00000508282 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
DHFR-204ENST00000508282 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
DHFR-204ENST00000508282 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
DHFR-204ENST00000508282 GCGRP47871 477 aa12.04□□□□□ -0.48
DHFR-204ENST00000508282 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
DHFR-204ENST00000508282 MTRQ99707 1265 aa12.04□□□□□ -0.48
DHFR-204ENST00000508282 PDE4DQ08499 809 aa12.03□□□□□ -0.48
DHFR-204ENST00000508282 GIGYF2Q6Y7W6 1299 aaKnown RBP12.02□□□□□ -0.49
DHFR-204ENST00000508282 PCDHB3Q9Y5E6 796 aa12.02□□□□□ -0.49
DHFR-204ENST00000508282 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
DHFR-204ENST00000508282 COPS2P61201 443 aa12.01□□□□□ -0.49
DHFR-204ENST00000508282 KCNC4Q03721 635 aa11.99□□□□□ -0.49
DHFR-204ENST00000508282 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
DHFR-204ENST00000508282 BLOC1S3Q6QNY0 202 aa11.99□□□□□ -0.49
DHFR-204ENST00000508282 IL21Q9HBE4 155 aa11.99□□□□□ -0.49
DHFR-204ENST00000508282 FUT2Q10981 343 aa11.98□□□□□ -0.49
DHFR-204ENST00000508282 ZNF516Q92618 1163 aa11.98□□□□□ -0.49
DHFR-204ENST00000508282 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
DHFR-204ENST00000508282 MS4A1P11836 297 aa11.96□□□□□ -0.49
DHFR-204ENST00000508282 KDM4AO75164 1064 aa11.94□□□□□ -0.5
DHFR-204ENST00000508282 ZPR1O75312 459 aa11.93□□□□□ -0.5
DHFR-204ENST00000508282 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
DHFR-204ENST00000508282 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
DHFR-204ENST00000508282 MORN1Q5T089 497 aa11.93□□□□□ -0.5
DHFR-204ENST00000508282 NKX2-3Q8TAU0 364 aa11.92□□□□□ -0.5
DHFR-204ENST00000508282 SCUBE3Q8IX30 993 aa11.91□□□□□ -0.5
DHFR-204ENST00000508282 BEGAINQ9BUH8 593 aa11.91□□□□□ -0.5
DHFR-204ENST00000508282 NR1I2O75469 434 aa11.9□□□□□ -0.5
DHFR-204ENST00000508282 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
DHFR-204ENST00000508282 USP46P62068 366 aa11.89□□□□□ -0.51
DHFR-204ENST00000508282 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
DHFR-204ENST00000508282 HOXA2O43364 376 aa11.88□□□□□ -0.51
DHFR-204ENST00000508282 TLL1O43897 1013 aa11.88□□□□□ -0.51
DHFR-204ENST00000508282 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
DHFR-204ENST00000508282 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
DHFR-204ENST00000508282 HLA-CQ95604 372 aa11.88□□□□□ -0.51
DHFR-204ENST00000508282 A0A0G2JS52 829 aa11.87□□□□□ -0.51
DHFR-204ENST00000508282 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
DHFR-204ENST00000508282 KDM4CQ9H3R0 1056 aa11.87□□□□□ -0.51
DHFR-204ENST00000508282 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
DHFR-204ENST00000508282 TBC1D2Q9BYX2 928 aa11.84□□□□□ -0.51
DHFR-204ENST00000508282 GUCA2AQ02747 115 aa11.83□□□□□ -0.52
DHFR-204ENST00000508282 RNF19BQ6ZMZ0 732 aa11.82□□□□□ -0.52
DHFR-204ENST00000508282 ADH1BP00325 375 aa11.81□□□□□ -0.52
DHFR-204ENST00000508282 NDUFV2P19404 249 aa11.81□□□□□ -0.52
DHFR-204ENST00000508282 BRICD5Q6PL45 260 aa11.81□□□□□ -0.52
DHFR-204ENST00000508282 SPSB2Q99619 263 aa11.81□□□□□ -0.52
DHFR-204ENST00000508282 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
DHFR-204ENST00000508282 MOXD2PA6NHM9 499 aa11.8□□□□□ -0.52
DHFR-204ENST00000508282 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
DHFR-204ENST00000508282 PPP1R18Q6NYC8 613 aa11.8□□□□□ -0.52
DHFR-204ENST00000508282 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
DHFR-204ENST00000508282 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
DHFR-204ENST00000508282 FAM117AQ9C073 453 aa11.79□□□□□ -0.52
DHFR-204ENST00000508282 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
DHFR-204ENST00000508282 FDX1P10109 184 aa11.78□□□□□ -0.52
DHFR-204ENST00000508282 Q3C1V9 767 aa11.78□□□□□ -0.52
DHFR-204ENST00000508282 S1PR4O95977 384 aa11.77□□□□□ -0.53
DHFR-204ENST00000508282 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
DHFR-204ENST00000508282 FAM160A2Q8N612 972 aaPredicted RBP11.77□□□□□ -0.53
DHFR-204ENST00000508282 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
DHFR-204ENST00000508282 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
DHFR-204ENST00000508282 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
DHFR-204ENST00000508282 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
DHFR-204ENST00000508282 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms