RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 MSH6P52701 1360 aa14.61□□□□□ -0.07
UBE2D3-223ENST00000508249 EP400Q96L91 3159 aa14.61□□□□□ -0.07
UBE2D3-223ENST00000508249 TMEM131LA2VDJ0 1609 aa14.61□□□□□ -0.07
UBE2D3-223ENST00000508249 ABCC5O15440 1437 aa14.6□□□□□ -0.07
UBE2D3-223ENST00000508249 IDI1Q13907 227 aa14.6□□□□□ -0.07
UBE2D3-223ENST00000508249 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-223ENST00000508249 NHSL1Q5SYE7 1610 aa14.59□□□□□ -0.07
UBE2D3-223ENST00000508249 SLAIN2Q9P270 581 aa14.59□□□□□ -0.07
UBE2D3-223ENST00000508249 SPATA31A6Q5VVP1 1343 aa14.58□□□□□ -0.08
UBE2D3-223ENST00000508249 PTPN23Q9H3S7 1636 aa14.58□□□□□ -0.08
UBE2D3-223ENST00000508249 RGS12O14924 1447 aa14.57□□□□□ -0.08
UBE2D3-223ENST00000508249 TRIM52Q96A61 297 aa14.56□□□□□ -0.08
UBE2D3-223ENST00000508249 PLEKHG1Q9ULL1 1385 aa14.56□□□□□ -0.08
UBE2D3-223ENST00000508249 DAPK1P53355 1430 aa14.55□□□□□ -0.08
UBE2D3-223ENST00000508249 ADAMTS13Q76LX8 1427 aa14.55□□□□□ -0.08
UBE2D3-223ENST00000508249 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
UBE2D3-223ENST00000508249 LOC105371045A0A1W2PR82 267 aa14.54□□□□□ -0.08
UBE2D3-223ENST00000508249 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
UBE2D3-223ENST00000508249 XRN1Q8IZH2 1706 aaKnown RBP14.54□□□□□ -0.08
UBE2D3-223ENST00000508249 KANK4Q5T7N3 995 aaPredicted RBP14.53□□□□□ -0.08
UBE2D3-223ENST00000508249 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
UBE2D3-223ENST00000508249 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.08
UBE2D3-223ENST00000508249 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
UBE2D3-223ENST00000508249 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-223ENST00000508249 RIMS2Q9UQ26 1411 aa14.51□□□□□ -0.09
UBE2D3-223ENST00000508249 UNC13BO14795 1591 aa14.51□□□□□ -0.09
UBE2D3-223ENST00000508249 RRP7BPQ9NSQ0 103 aa14.5□□□□□ -0.09
UBE2D3-223ENST00000508249 PTPRUQ92729 1446 aa14.49□□□□□ -0.09
UBE2D3-223ENST00000508249 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
UBE2D3-223ENST00000508249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
UBE2D3-223ENST00000508249 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
UBE2D3-223ENST00000508249 E9PCH4 1651 aa14.49□□□□□ -0.09
UBE2D3-223ENST00000508249 KANK1Q14678 1352 aa14.48□□□□□ -0.09
UBE2D3-223ENST00000508249 TRPM2O94759 1503 aa14.48□□□□□ -0.09
UBE2D3-223ENST00000508249 ADGRL2O95490 1459 aa14.48□□□□□ -0.09
UBE2D3-223ENST00000508249 LAMC1P11047 1609 aa14.48□□□□□ -0.09
UBE2D3-223ENST00000508249 SETBP1Q9Y6X0 1596 aa14.47□□□□□ -0.09
UBE2D3-223ENST00000508249 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
UBE2D3-223ENST00000508249 RXRBP28702 533 aa14.47□□□□□ -0.09
UBE2D3-223ENST00000508249 MEX3CQ5U5Q3 659 aaKnown RBP14.47□□□□□ -0.09
UBE2D3-223ENST00000508249 BRINP3Q76B58 766 aa14.47□□□□□ -0.09
UBE2D3-223ENST00000508249 DCCP43146 1447 aa14.47□□□□□ -0.09
UBE2D3-223ENST00000508249 AFF2P51816 1311 aa14.46□□□□□ -0.09
UBE2D3-223ENST00000508249 MST1RQ04912 1400 aa14.46□□□□□ -0.09
UBE2D3-223ENST00000508249 SLC52A1Q9NWF4 448 aa14.45□□□□□ -0.1
UBE2D3-223ENST00000508249 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
UBE2D3-223ENST00000508249 PIK3R4Q99570 1358 aa14.44□□□□□ -0.1
UBE2D3-223ENST00000508249 PNPLA6Q8IY17 1366 aa14.43□□□□□ -0.1
UBE2D3-223ENST00000508249 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
UBE2D3-223ENST00000508249 C19orf44Q9H6X5 657 aa14.42□□□□□ -0.1
UBE2D3-223ENST00000508249 IQGAP3Q86VI3 1631 aa14.41□□□□□ -0.1
UBE2D3-223ENST00000508249 ANKRD30AQ9BXX3 1397 aa14.4□□□□□ -0.1
UBE2D3-223ENST00000508249 NUTM2BA6NNL0 878 aaPredicted RBP14.39□□□□□ -0.11
UBE2D3-223ENST00000508249 NUTM2EB1AL46 878 aaPredicted RBP14.39□□□□□ -0.11
UBE2D3-223ENST00000508249 NUTM2AQ8IVF1 878 aaPredicted RBP14.39□□□□□ -0.11
UBE2D3-223ENST00000508249 COL22A1Q8NFW1 1626 aaPredicted RBP14.39□□□□□ -0.11
UBE2D3-223ENST00000508249 MARF1Q9Y4F3 1742 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-223ENST00000508249 RBM6P78332 1123 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-223ENST00000508249 BCANQ96GW7 911 aa14.37□□□□□ -0.11
UBE2D3-223ENST00000508249 ATF3P18847 181 aa14.36□□□□□ -0.11
UBE2D3-223ENST00000508249 APLP2Q06481 763 aa14.36□□□□□ -0.11
UBE2D3-223ENST00000508249 DDX17Q92841 729 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-223ENST00000508249 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
UBE2D3-223ENST00000508249 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
UBE2D3-223ENST00000508249 ANKRD50Q9ULJ7 1429 aa14.35□□□□□ -0.11
UBE2D3-223ENST00000508249 PPP1R15AO75807 674 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-223ENST00000508249 NUTM2DQ5VT03 806 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-223ENST00000508249 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
UBE2D3-223ENST00000508249 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
UBE2D3-223ENST00000508249 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
UBE2D3-223ENST00000508249 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-223ENST00000508249 LRP5O75197 1615 aa14.33□□□□□ -0.11
UBE2D3-223ENST00000508249 ATRNO75882 1429 aa14.33□□□□□ -0.11
UBE2D3-223ENST00000508249 AMOTL2Q9Y2J4 779 aa14.33□□□□□ -0.12
UBE2D3-223ENST00000508249 SPHKAPQ2M3C7 1700 aa14.32□□□□□ -0.12
UBE2D3-223ENST00000508249 METP08581 1390 aa14.32□□□□□ -0.12
UBE2D3-223ENST00000508249 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-223ENST00000508249 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
UBE2D3-223ENST00000508249 BRWD3Q6RI45 1802 aa14.3□□□□□ -0.12
UBE2D3-223ENST00000508249 MYOM2P54296 1465 aa14.3□□□□□ -0.12
UBE2D3-223ENST00000508249 C1orf167Q5SNV9 1468 aa14.3□□□□□ -0.12
UBE2D3-223ENST00000508249 NEXMIFQ5QGS0 1516 aa14.3□□□□□ -0.12
UBE2D3-223ENST00000508249 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-223ENST00000508249 GLI3P10071 1580 aa14.28□□□□□ -0.12
UBE2D3-223ENST00000508249 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
UBE2D3-223ENST00000508249 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
UBE2D3-223ENST00000508249 HDGFP51858 240 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-223ENST00000508249 CLTCL1P53675 1640 aa14.26□□□□□ -0.13
UBE2D3-223ENST00000508249 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
UBE2D3-223ENST00000508249 SOS2Q07890 1332 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-223ENST00000508249 ADAMTS2O95450 1211 aa14.25□□□□□ -0.13
UBE2D3-223ENST00000508249 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-223ENST00000508249 CHGAP10645 457 aaKnown RBP14.24□□□□□ -0.13
UBE2D3-223ENST00000508249 PXDNQ92626 1479 aa14.24□□□□□ -0.13
UBE2D3-223ENST00000508249 NGLY1Q96IV0 654 aa14.23□□□□□ -0.13
UBE2D3-223ENST00000508249 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
UBE2D3-223ENST00000508249 USP21Q9UK80 565 aa14.23□□□□□ -0.13
UBE2D3-223ENST00000508249 TRPC5Q9UL62 973 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-223ENST00000508249 CDC42BPGQ6DT37 1551 aa14.21□□□□□ -0.14
UBE2D3-223ENST00000508249 ROBO2Q9HCK4 1378 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms