RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 PTPRMP28827 1452 aa13□□□□□ -0.33
CDH6-204ENST00000508132 THSD4Q6ZMP0 1018 aa13□□□□□ -0.33
CDH6-204ENST00000508132 ADAMTSL3P82987 1691 aa12.99□□□□□ -0.33
CDH6-204ENST00000508132 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
CDH6-204ENST00000508132 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
CDH6-204ENST00000508132 COL9A1P20849 921 aa12.99□□□□□ -0.33
CDH6-204ENST00000508132 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
CDH6-204ENST00000508132 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
CDH6-204ENST00000508132 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
CDH6-204ENST00000508132 WNT2BQ93097 391 aa12.96□□□□□ -0.33
CDH6-204ENST00000508132 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
CDH6-204ENST00000508132 TTBK1Q5TCY1 1321 aaPredicted RBP12.95□□□□□ -0.34
CDH6-204ENST00000508132 TEX14Q8IWB6 1497 aa12.95□□□□□ -0.34
CDH6-204ENST00000508132 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
CDH6-204ENST00000508132 PPP1R3GB7ZBB8 358 aa12.93□□□□□ -0.34
CDH6-204ENST00000508132 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
CDH6-204ENST00000508132 DPYSL4O14531 572 aa12.92□□□□□ -0.34
CDH6-204ENST00000508132 PTPRGP23470 1445 aa12.92□□□□□ -0.34
CDH6-204ENST00000508132 HSPA2P54652 639 aa12.91□□□□□ -0.34
CDH6-204ENST00000508132 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
CDH6-204ENST00000508132 KIAA0586Q9BVV6 1533 aa12.9□□□□□ -0.34
CDH6-204ENST00000508132 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
CDH6-204ENST00000508132 ZCCHC11Q5TAX3 1644 aaKnown RBP12.9□□□□□ -0.34
CDH6-204ENST00000508132 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
CDH6-204ENST00000508132 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
CDH6-204ENST00000508132 PHF14O94880 888 aa12.88□□□□□ -0.35
CDH6-204ENST00000508132 UHRF1BP1LA0JNW5 1464 aa12.87□□□□□ -0.35
CDH6-204ENST00000508132 BCORL1Q5H9F3 1711 aa12.87□□□□□ -0.35
CDH6-204ENST00000508132 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
CDH6-204ENST00000508132 BCAMP50895 628 aa12.85□□□□□ -0.35
CDH6-204ENST00000508132 RABGEF1Q9UJ41 708 aa12.85□□□□□ -0.35
CDH6-204ENST00000508132 RIMS1Q86UR5 1692 aaKnown RBP12.84□□□□□ -0.35
CDH6-204ENST00000508132 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
CDH6-204ENST00000508132 DDX12PQ92771 950 aa12.83□□□□□ -0.36
CDH6-204ENST00000508132 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
CDH6-204ENST00000508132 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
CDH6-204ENST00000508132 KIAA1468Q9P260 1216 aa12.82□□□□□ -0.36
CDH6-204ENST00000508132 SEPT9Q9UHD8 586 aaPredicted RBP12.82□□□□□ -0.36
CDH6-204ENST00000508132 UACAQ9BZF9 1416 aa12.81□□□□□ -0.36
CDH6-204ENST00000508132 CFAP43Q8NDM7 1665 aa12.81□□□□□ -0.36
CDH6-204ENST00000508132 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
CDH6-204ENST00000508132 MAGI3Q5TCQ9 1506 aa12.81□□□□□ -0.36
CDH6-204ENST00000508132 A0A0G2JS52 829 aa12.79□□□□□ -0.36
CDH6-204ENST00000508132 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
CDH6-204ENST00000508132 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
CDH6-204ENST00000508132 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
CDH6-204ENST00000508132 CD109Q6YHK3 1445 aa12.77□□□□□ -0.37
CDH6-204ENST00000508132 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
CDH6-204ENST00000508132 EPAS1Q99814 870 aa12.76□□□□□ -0.37
CDH6-204ENST00000508132 DISP1Q96F81 1524 aa12.76□□□□□ -0.37
CDH6-204ENST00000508132 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
CDH6-204ENST00000508132 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
CDH6-204ENST00000508132 ZFRQ96KR1 1074 aaKnown RBP12.75□□□□□ -0.37
CDH6-204ENST00000508132 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
CDH6-204ENST00000508132 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
CDH6-204ENST00000508132 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
CDH6-204ENST00000508132 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
CDH6-204ENST00000508132 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
CDH6-204ENST00000508132 FRMPD1Q5SYB0 1578 aa12.73□□□□□ -0.37
CDH6-204ENST00000508132 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
CDH6-204ENST00000508132 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
CDH6-204ENST00000508132 NBR1Q14596 966 aa12.72□□□□□ -0.37
CDH6-204ENST00000508132 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
CDH6-204ENST00000508132 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
CDH6-204ENST00000508132 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CDH6-204ENST00000508132 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
CDH6-204ENST00000508132 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
CDH6-204ENST00000508132 IGF1RP08069 1367 aa12.69□□□□□ -0.38
CDH6-204ENST00000508132 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
CDH6-204ENST00000508132 MAP3K7O43318 606 aa12.67□□□□□ -0.38
CDH6-204ENST00000508132 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
CDH6-204ENST00000508132 C3orf80F5H4A9 247 aa12.66□□□□□ -0.38
CDH6-204ENST00000508132 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
CDH6-204ENST00000508132 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
CDH6-204ENST00000508132 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
CDH6-204ENST00000508132 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
CDH6-204ENST00000508132 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
CDH6-204ENST00000508132 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
CDH6-204ENST00000508132 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
CDH6-204ENST00000508132 SMAPO00193 183 aa12.63□□□□□ -0.39
CDH6-204ENST00000508132 RGS20O76081 388 aa12.63□□□□□ -0.39
CDH6-204ENST00000508132 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
CDH6-204ENST00000508132 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
CDH6-204ENST00000508132 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
CDH6-204ENST00000508132 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
CDH6-204ENST00000508132 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
CDH6-204ENST00000508132 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
CDH6-204ENST00000508132 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
CDH6-204ENST00000508132 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
CDH6-204ENST00000508132 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
CDH6-204ENST00000508132 LRCH3Q96II8 777 aa12.59□□□□□ -0.39
CDH6-204ENST00000508132 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
CDH6-204ENST00000508132 UGGT2Q9NYU1 1516 aa12.58□□□□□ -0.4
CDH6-204ENST00000508132 GRXCR2A6NFK2 248 aa12.58□□□□□ -0.4
CDH6-204ENST00000508132 E2F4Q16254 413 aa12.58□□□□□ -0.4
CDH6-204ENST00000508132 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
CDH6-204ENST00000508132 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
CDH6-204ENST00000508132 ABCA8O94911 1581 aa12.57□□□□□ -0.4
CDH6-204ENST00000508132 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
CDH6-204ENST00000508132 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms